Wall clock time and date at job start Sat Mar 6 2021 20:41:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47090 * 2 1 4 4 C 1.50697 * 109.47384 * 119.99843 * 2 1 3 5 5 C 1.38246 * 119.94138 * 65.00485 * 4 2 1 6 6 C 1.38236 * 120.05008 * 179.97438 * 5 4 2 7 7 Br 1.89100 * 120.03774 * 180.02562 * 6 5 4 8 8 C 1.38795 * 119.92525 * 0.02562 * 6 5 4 9 9 O 1.35916 * 120.05697 * 180.02562 * 8 6 5 10 10 C 1.42900 * 116.99567 * 180.02562 * 9 8 6 11 11 C 1.50702 * 109.46898 * 179.97438 * 10 9 8 12 12 O 1.21282 * 119.99799 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00436 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00244 * 174.90463 * 13 11 10 15 15 C 1.50704 * 112.85177 * 295.31303 * 14 13 11 16 16 C 1.38235 * 120.00316 * 163.97894 * 15 14 13 17 17 C 1.38233 * 120.00003 * 179.78970 * 16 15 14 18 18 C 1.38243 * 119.99783 * 0.43769 * 17 16 15 19 19 C 1.38228 * 120.00155 * 359.81505 * 18 17 16 20 20 C 1.38236 * 119.99535 * 344.24929 * 15 14 13 21 21 C 1.53778 * 113.61416 * 164.11737 * 14 13 11 22 22 C 1.53774 * 87.08188 * 270.88538 * 21 14 13 23 23 H 1.08998 * 113.61980 * 89.20190 * 22 21 14 24 24 F 1.39905 * 113.61233 * 220.02032 * 22 21 14 25 25 C 1.53777 * 113.61753 * 66.51026 * 14 13 11 26 26 C 1.38724 * 119.87990 * 0.28266 * 8 6 5 27 27 C 1.38137 * 119.95442 * 359.44752 * 26 8 6 28 28 H 0.96698 * 113.99380 * 299.99443 * 1 2 3 29 29 H 1.09006 * 109.47199 * 240.00344 * 2 1 3 30 30 H 1.48498 * 110.00259 * 178.67982 * 3 2 1 31 31 H 1.48505 * 109.99948 * 300.00235 * 3 2 1 32 32 H 1.08005 * 119.97416 * 359.97438 * 5 4 2 33 33 H 1.08999 * 109.47346 * 299.99483 * 10 9 8 34 34 H 1.09000 * 109.47309 * 60.00302 * 10 9 8 35 35 H 0.97001 * 119.99292 * 354.90812 * 13 11 10 36 36 H 1.07994 * 119.99652 * 359.97438 * 16 15 14 37 37 H 1.08000 * 119.99865 * 180.27435 * 17 16 15 38 38 H 1.08004 * 119.99286 * 179.83484 * 18 17 16 39 39 H 1.08001 * 120.00092 * 180.02562 * 19 18 17 40 40 H 1.08002 * 120.00902 * 359.97438 * 20 15 14 41 41 H 1.09007 * 113.61528 * 25.43325 * 21 14 13 42 42 H 1.09001 * 113.61638 * 156.24874 * 21 14 13 43 43 H 1.08991 * 113.61868 * 203.66611 * 25 14 13 44 44 H 1.09004 * 113.60846 * 334.56728 * 25 14 13 45 45 H 1.07997 * 120.01864 * 179.70011 * 26 8 6 46 46 H 1.07996 * 119.96479 * 180.25686 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6842 -2.0603 1.3971 6 6 2.1445 -2.7142 2.5247 7 35 1.8068 -4.5609 2.7520 8 6 2.8547 -2.0139 3.4898 9 8 3.3090 -2.6543 4.5992 10 6 4.0318 -1.8704 5.5505 11 6 4.4521 -2.7431 6.7049 12 8 4.1617 -3.9206 6.7120 13 7 5.1517 -2.2155 7.7290 14 6 5.4639 -3.0353 8.9022 15 6 4.2348 -3.4552 9.6666 16 6 4.3108 -4.4843 10.5864 17 6 3.1844 -4.8665 11.2906 18 6 1.9799 -4.2255 11.0685 19 6 1.9027 -3.1999 10.1450 20 6 3.0301 -2.8148 9.4439 21 6 6.5696 -2.4424 9.7914 22 6 7.5750 -3.2128 8.9194 23 1 7.9211 -2.6508 8.0519 24 9 8.6223 -3.7882 9.6470 25 6 6.4300 -4.1941 8.6047 26 6 3.0955 -0.6580 3.3226 27 6 2.6382 -0.0106 2.1912 28 1 -0.3932 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8901 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4679 -1.2085 32 1 1.1311 -2.6044 0.6458 33 1 4.9160 -1.4460 5.0748 34 1 3.3948 -1.0655 5.9172 35 1 5.4484 -1.2928 7.6890 36 1 5.2509 -4.9877 10.7569 37 1 3.2448 -5.6676 12.0124 38 1 1.0992 -4.5260 11.6169 39 1 0.9617 -2.6989 9.9718 40 1 2.9697 -2.0134 8.7224 41 1 6.6613 -1.3593 9.7104 42 1 6.5312 -2.7877 10.8246 43 1 6.3543 -5.0186 9.3136 44 1 6.4090 -4.5242 7.5661 45 1 3.6438 -0.1099 4.0744 46 1 2.8291 1.0440 2.0589 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:41:54 Heat of formation + Delta-G solvation = -46.118243 kcal Electronic energy + Delta-G solvation = -33551.404643 eV Core-core repulsion = 28756.353643 eV Total energy + Delta-G solvation = -4795.051000 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -48.62013 -42.07854 -41.41923 -39.95876 -39.11781 -38.42334 -37.19156 -34.50090 -33.59254 -32.04865 -31.88035 -31.76311 -30.51751 -29.55683 -27.15782 -26.44251 -25.76807 -24.08587 -23.56514 -22.68196 -22.39227 -21.83872 -20.42377 -19.54150 -18.62186 -18.54730 -18.13363 -17.44644 -17.33027 -17.07800 -16.92893 -16.63539 -16.42722 -16.00341 -15.95907 -15.73546 -15.63227 -15.56085 -15.28335 -14.93387 -14.70272 -14.43271 -14.37731 -14.10965 -13.93576 -13.83697 -13.77762 -13.66331 -13.52548 -13.33495 -12.63795 -12.35363 -12.30088 -12.17926 -12.12828 -11.96990 -11.90621 -11.84104 -11.69448 -11.44009 -11.23800 -10.95728 -10.42335 -10.31920 -9.97645 -9.86732 -9.63541 -9.32191 -4.97962 -0.05336 0.11879 0.35143 0.45176 0.64083 1.31386 1.34676 1.46534 1.67199 2.02671 2.39802 2.42439 2.71906 3.15922 3.22395 3.39597 3.43192 3.49318 3.58505 3.66112 3.76344 3.79850 3.82633 3.99710 4.02409 4.05396 4.08548 4.12145 4.17423 4.22255 4.33107 4.49418 4.50712 4.57116 4.59165 4.64239 4.67057 4.70142 4.83492 4.84746 4.99605 5.00264 5.02001 5.12087 5.23938 5.32135 5.48005 5.51001 5.58411 5.64851 6.04603 6.06547 6.42600 6.79719 7.14322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.789 3.211 4 C -0.153 4.153 5 C -0.037 4.037 6 C -0.145 4.145 7 Br -0.057 7.057 8 C 0.150 3.850 9 O -0.304 6.304 10 C 0.031 3.969 11 C 0.514 3.486 12 O -0.546 6.546 13 N -0.693 5.693 14 C 0.202 3.798 15 C -0.082 4.082 16 C -0.125 4.125 17 C -0.128 4.128 18 C -0.133 4.133 19 C -0.131 4.131 20 C -0.113 4.113 21 C -0.136 4.136 22 C 0.066 3.934 23 H 0.134 0.866 24 F -0.221 7.221 25 C -0.166 4.166 26 C -0.188 4.188 27 C -0.052 4.052 28 H 0.396 0.604 29 H 0.103 0.897 30 H -0.276 1.276 31 H -0.306 1.306 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.135 0.865 35 H 0.428 0.572 36 H 0.130 0.870 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.128 0.872 41 H 0.122 0.878 42 H 0.108 0.892 43 H 0.098 0.902 44 H 0.072 0.928 45 H 0.183 0.817 46 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.707 11.431 3.546 12.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.186 4.186 3 Si 0.695 3.305 4 C -0.155 4.155 5 C -0.057 4.057 6 C -0.225 4.225 7 Br 0.028 6.972 8 C 0.102 3.898 9 O -0.217 6.217 10 C -0.047 4.047 11 C 0.300 3.700 12 O -0.421 6.421 13 N -0.350 5.350 14 C 0.114 3.886 15 C -0.083 4.083 16 C -0.144 4.144 17 C -0.146 4.146 18 C -0.151 4.151 19 C -0.149 4.149 20 C -0.131 4.131 21 C -0.174 4.174 22 C 0.031 3.969 23 H 0.151 0.849 24 F -0.201 7.201 25 C -0.205 4.205 26 C -0.207 4.207 27 C -0.070 4.070 28 H 0.246 0.754 29 H 0.120 0.880 30 H -0.202 1.202 31 H -0.234 1.234 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.152 0.848 35 H 0.267 0.733 36 H 0.148 0.852 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.146 0.854 41 H 0.141 0.859 42 H 0.127 0.873 43 H 0.116 0.884 44 H 0.091 0.909 45 H 0.200 0.800 46 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.932 9.943 2.748 10.495 hybrid contribution 0.072 -0.627 -0.444 0.772 sum 2.004 9.315 2.305 9.803 Atomic orbital electron populations 1.86493 1.17390 1.82248 1.50506 1.25290 0.85274 1.11424 0.96586 0.93814 0.77805 0.73923 0.85008 1.20369 1.02666 0.93675 0.98762 1.20873 0.95875 0.94550 0.94426 1.21276 1.09868 0.91824 0.99556 1.96767 1.94990 1.07692 1.97706 1.18787 0.93199 0.91755 0.86047 1.86253 1.68641 1.37841 1.28923 1.22885 0.99848 0.93659 0.88281 1.20492 0.77747 0.88197 0.83536 1.90833 1.54371 1.18181 1.78732 1.45303 1.56842 1.16593 1.16237 1.19532 0.90753 0.92671 0.85626 1.19770 0.94750 0.96768 0.97032 1.21157 0.99428 0.96960 0.96807 1.21403 0.92909 1.00300 1.00018 1.21465 0.98487 0.96482 0.98618 1.21425 0.99095 0.97778 0.96599 1.21062 0.92308 1.00300 0.99465 1.23928 0.90581 1.03382 0.99469 1.23406 0.82862 0.95236 0.95438 0.84866 1.92800 1.61224 1.86335 1.79787 1.24130 0.94541 0.98106 1.03698 1.21588 1.05939 0.91448 1.01707 1.21258 0.93513 1.00656 0.91579 0.75406 0.87975 1.20230 1.23427 0.84902 0.84938 0.84767 0.73263 0.85203 0.84619 0.84732 0.84793 0.85422 0.85948 0.87315 0.88404 0.90896 0.79985 0.81511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.68 12.83 -148.98 -1.91 -1.24 16 2 C -0.08 0.22 2.80 71.23 0.20 0.42 16 3 Si 0.79 -4.94 29.80 68.60 2.04 -2.90 16 4 C -0.15 0.38 5.35 -19.85 -0.11 0.28 16 5 C -0.04 -0.09 9.42 22.27 0.21 0.12 16 6 C -0.15 -0.71 6.24 22.40 0.14 -0.57 16 7 Br -0.06 -0.53 33.16 -20.37 -0.68 -1.21 16 8 C 0.15 0.10 6.68 22.52 0.15 0.25 16 9 O -0.30 -0.79 9.01 -73.57 -0.66 -1.46 16 10 C 0.03 -0.24 5.22 71.24 0.37 0.13 16 11 C 0.51 -0.72 6.29 87.66 0.55 -0.17 16 12 O -0.55 -5.93 14.99 16.00 0.24 -5.69 16 13 N -0.69 5.55 4.33 -423.93 -1.83 3.71 16 14 C 0.20 -0.64 0.93 3.38 0.00 -0.63 16 15 C -0.08 -0.16 4.69 -19.86 -0.09 -0.25 16 16 C -0.13 -0.39 8.86 22.27 0.20 -0.19 16 17 C -0.13 -0.40 10.05 22.27 0.22 -0.18 16 18 C -0.13 -0.40 10.05 22.27 0.22 -0.18 16 19 C -0.13 -0.37 10.05 22.27 0.22 -0.14 16 20 C -0.11 -0.24 8.81 22.27 0.20 -0.04 16 21 C -0.14 0.98 7.19 31.12 0.22 1.20 16 22 C 0.07 -0.25 5.58 31.21 0.17 -0.07 16 23 H 0.13 -1.14 8.14 -2.39 -0.02 -1.16 16 24 F -0.22 -0.71 17.41 44.97 0.78 0.07 16 25 C -0.17 -0.09 6.68 31.21 0.21 0.11 16 26 C -0.19 1.40 9.04 22.36 0.20 1.60 16 27 C -0.05 0.39 8.66 22.26 0.19 0.59 16 28 H 0.40 -3.85 8.70 -74.06 -0.64 -4.49 16 29 H 0.10 -0.08 7.96 -2.38 -0.02 -0.10 16 30 H -0.28 0.79 7.11 99.48 0.71 1.49 16 31 H -0.31 -0.82 7.11 99.48 0.71 -0.12 16 32 H 0.13 0.45 8.06 -2.91 -0.02 0.43 16 33 H 0.13 -2.00 7.67 -2.39 -0.02 -2.02 16 34 H 0.13 -2.05 7.65 -2.39 -0.02 -2.07 16 35 H 0.43 -7.26 8.66 -92.71 -0.80 -8.06 16 36 H 0.13 0.10 6.38 -2.91 -0.02 0.08 16 37 H 0.14 -0.05 8.06 -2.91 -0.02 -0.07 16 38 H 0.13 -0.06 8.06 -2.91 -0.02 -0.09 16 39 H 0.13 -0.10 8.06 -2.91 -0.02 -0.12 16 40 H 0.13 -0.24 6.74 -2.91 -0.02 -0.26 16 41 H 0.12 -1.62 8.09 -2.38 -0.02 -1.64 16 42 H 0.11 -0.60 7.88 -2.39 -0.02 -0.62 16 43 H 0.10 0.21 6.09 -2.39 -0.01 0.20 16 44 H 0.07 0.34 7.30 -2.38 -0.02 0.32 16 45 H 0.18 -2.98 6.30 -2.91 -0.02 -3.00 16 46 H 0.17 -2.32 4.90 -2.91 -0.01 -2.34 16 Total: 0.00 -31.21 403.01 1.13 -30.08 By element: Atomic # 1 Polarization: -23.29 SS G_CDS: -0.34 Total: -23.63 kcal Atomic # 6 Polarization: -1.23 SS G_CDS: 3.49 Total: 2.26 kcal Atomic # 7 Polarization: 5.55 SS G_CDS: -1.83 Total: 3.71 kcal Atomic # 8 Polarization: -6.05 SS G_CDS: -2.33 Total: -8.39 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.78 Total: 0.07 kcal Atomic # 14 Polarization: -4.94 SS G_CDS: 2.04 Total: -2.90 kcal Atomic # 35 Polarization: -0.53 SS G_CDS: -0.68 Total: -1.21 kcal Total: -31.21 1.13 -30.08 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.041 kcal (2) G-P(sol) polarization free energy of solvation -31.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.077 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.118 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds