Wall clock time and date at job start Sat Mar 6 2021 20:42:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35971 * 116.99629 * 2 1 4 4 C 1.39442 * 120.11743 * 180.02562 * 3 2 1 5 5 O 1.34777 * 133.24757 * 0.02562 * 4 3 2 6 6 C 1.34928 * 110.84641 * 179.97438 * 5 4 3 7 7 C 1.46989 * 125.14008 * 179.97438 * 6 5 4 8 8 O 1.21658 * 119.99761 * 180.02562 * 7 6 5 9 9 N 1.34774 * 120.00281 * 0.02562 * 7 6 5 10 10 C 1.46503 * 119.99890 * 185.01740 * 9 7 6 11 11 C 1.50699 * 112.84987 * 294.69022 * 10 9 7 12 12 C 1.38234 * 119.99946 * 313.77600 * 11 10 9 13 13 C 1.38234 * 119.99919 * 180.25916 * 12 11 10 14 14 C 1.38235 * 119.99901 * 359.53014 * 13 12 11 15 15 C 1.38231 * 119.99937 * 0.42350 * 14 13 12 16 16 C 1.38225 * 119.99884 * 133.75368 * 11 10 9 17 17 C 1.53785 * 113.61112 * 163.49627 * 10 9 7 18 18 C 1.53785 * 87.07884 * 270.79996 * 17 10 9 19 19 H 1.09004 * 113.61197 * 89.20273 * 18 17 10 20 20 F 1.39899 * 113.61233 * 220.01771 * 18 17 10 21 21 C 1.53778 * 113.68891 * 65.96047 * 10 9 7 22 22 C 1.35812 * 109.71767 * 0.24495 * 6 5 4 23 23 C 1.40610 * 119.13438 * 179.97438 * 4 3 2 24 24 C 1.39774 * 120.12334 * 0.02617 * 23 4 3 25 25 C 1.50696 * 120.10084 * 180.02562 * 24 23 4 26 26 O 1.42896 * 109.47375 * 74.99350 * 25 24 23 27 27 Si 1.86292 * 109.47385 * 194.99853 * 25 24 23 28 28 C 1.36631 * 119.80988 * 359.97438 * 24 23 4 29 29 C 1.38251 * 120.12086 * 0.02562 * 3 2 1 30 30 H 1.09004 * 109.46550 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47182 * 299.99805 * 1 2 3 32 32 H 1.08993 * 109.47223 * 60.00407 * 1 2 3 33 33 H 0.97004 * 119.99697 * 5.02013 * 9 7 6 34 34 H 1.08004 * 120.00039 * 359.97438 * 12 11 10 35 35 H 1.08003 * 120.00312 * 179.72023 * 13 12 11 36 36 H 1.08000 * 120.00048 * 180.21644 * 14 13 12 37 37 H 1.08006 * 120.00253 * 179.78689 * 15 14 13 38 38 H 1.08007 * 120.00126 * 0.02562 * 16 11 10 39 39 H 1.09006 * 113.61370 * 25.34440 * 17 10 9 40 40 H 1.08996 * 113.61283 * 156.16862 * 17 10 9 41 41 H 1.09001 * 113.60962 * 203.66987 * 21 10 9 42 42 H 1.08993 * 113.61583 * 334.57695 * 21 10 9 43 43 H 1.07996 * 126.95599 * 179.75744 * 22 6 5 44 44 H 1.09007 * 109.46873 * 314.99971 * 25 24 23 45 45 H 0.96699 * 114.00178 * 180.02562 * 26 25 24 46 46 H 1.48500 * 110.00211 * 299.99701 * 27 25 24 47 47 H 1.48501 * 110.00093 * 61.31718 * 27 25 24 48 48 H 1.08001 * 119.75265 * 180.02562 * 28 24 23 49 49 H 1.08004 * 119.66829 * 359.97438 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4386 1.2875 -0.0005 5 8 4.4141 0.3575 -0.0016 6 6 5.6317 0.9388 -0.0023 7 6 6.9131 0.2187 -0.0029 8 8 7.9596 0.8391 -0.0030 9 7 6.9288 -1.1290 -0.0033 10 6 8.2011 -1.8468 0.1070 11 6 9.1024 -1.6261 -1.0805 12 6 8.5921 -1.7177 -2.3619 13 6 9.4199 -1.5205 -3.4512 14 6 10.7560 -1.2223 -3.2590 15 6 11.2660 -1.1299 -1.9775 16 6 10.4392 -1.3318 -0.8882 17 6 8.0419 -3.3269 0.4929 18 6 8.1133 -2.8706 1.9598 19 1 7.1425 -2.6175 2.3861 20 9 8.8590 -3.7268 2.7773 21 6 8.9056 -1.6511 1.4599 22 6 5.4944 2.2900 0.0037 23 6 4.0553 2.5511 -0.0011 24 6 3.2765 3.7118 -0.0005 25 6 3.9379 5.0658 -0.0017 26 8 4.4589 5.3403 -1.3036 27 14 2.6867 6.3686 0.4539 28 6 1.9136 3.6152 0.0000 29 6 1.2957 2.3726 0.0005 30 1 -0.3632 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5137 -0.8900 33 1 6.0975 -1.6236 -0.0767 34 1 7.5476 -1.9477 -2.5121 35 1 9.0223 -1.5965 -4.4525 36 1 11.4020 -1.0649 -4.1100 37 1 12.3107 -0.9003 -1.8273 38 1 10.8379 -1.2603 0.1130 39 1 7.0767 -3.7495 0.2137 40 1 8.8817 -3.9506 0.1869 41 1 9.9822 -1.8166 1.4194 42 1 8.6378 -0.7211 1.9611 43 1 6.2873 3.0232 0.0084 44 1 4.7512 5.0735 0.7241 45 1 4.9001 6.1976 -1.3780 46 1 1.5727 6.3684 -0.5280 47 1 2.1607 6.1124 1.8188 48 1 1.3127 4.5126 0.0000 49 1 0.2173 2.3120 0.0005 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:42:07 Heat of formation + Delta-G solvation = -42.597117 kcal Electronic energy + Delta-G solvation = -37568.126829 eV Core-core repulsion = 32537.912046 eV Total energy + Delta-G solvation = -5030.214783 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.141 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -48.56290 -43.70962 -41.89024 -40.73141 -39.72074 -39.00608 -38.54301 -37.11688 -34.43232 -33.61102 -32.08433 -31.91041 -31.77061 -30.95895 -28.76988 -27.34251 -26.55340 -26.08755 -24.76347 -24.01455 -23.36615 -22.61358 -22.01831 -21.63130 -20.45771 -19.83580 -18.89614 -18.55457 -18.49013 -18.43933 -17.64764 -17.48107 -17.15542 -16.94759 -16.66235 -16.56952 -16.36176 -16.12257 -15.80672 -15.57106 -15.50417 -15.44610 -15.25555 -14.76149 -14.50576 -14.36231 -14.28557 -14.05225 -14.01491 -14.00414 -13.66773 -13.57961 -13.44452 -13.35578 -13.16525 -12.68432 -12.64722 -12.46361 -12.22206 -12.11899 -11.92025 -11.89430 -11.76848 -11.50828 -11.38830 -10.97143 -10.39014 -10.35799 -9.82274 -9.76383 -9.60557 -9.03016 -5.04254 -0.62641 0.07171 0.41404 0.55781 0.67483 1.18001 1.24464 1.57488 1.80055 1.88177 1.99929 2.00755 2.34123 2.78585 3.05609 3.12655 3.19115 3.32067 3.38316 3.40999 3.50310 3.64785 3.69738 3.78874 3.90147 3.95951 4.02859 4.05996 4.06398 4.10160 4.11334 4.16391 4.25101 4.31318 4.40897 4.42248 4.46200 4.49963 4.51644 4.64301 4.67233 4.78305 4.81409 4.82895 4.95117 5.02285 5.07123 5.17282 5.19251 5.24154 5.29520 5.56092 5.59836 5.67430 5.69399 6.09587 6.11836 6.25135 6.59112 6.88106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.151 3.849 4 C 0.048 3.952 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.490 6.490 9 N -0.701 5.701 10 C 0.196 3.804 11 C -0.076 4.076 12 C -0.104 4.104 13 C -0.120 4.120 14 C -0.116 4.116 15 C -0.118 4.118 16 C -0.100 4.100 17 C -0.150 4.150 18 C 0.067 3.933 19 H 0.112 0.888 20 F -0.201 7.201 21 C -0.161 4.161 22 C -0.100 4.100 23 C -0.081 4.081 24 C -0.051 4.051 25 C -0.071 4.071 26 O -0.542 6.542 27 Si 0.686 3.314 28 C -0.096 4.096 29 C -0.177 4.177 30 H 0.107 0.893 31 H 0.060 0.940 32 H 0.060 0.940 33 H 0.411 0.589 34 H 0.117 0.883 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.126 0.874 39 H 0.091 0.909 40 H 0.115 0.885 41 H 0.113 0.887 42 H 0.091 0.909 43 H 0.175 0.825 44 H 0.075 0.925 45 H 0.383 0.617 46 H -0.248 1.248 47 H -0.253 1.253 48 H 0.134 0.866 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.246 2.135 0.021 3.885 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C 0.000 4.000 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.392 3.608 8 O -0.365 6.365 9 N -0.354 5.354 10 C 0.109 3.891 11 C -0.078 4.078 12 C -0.123 4.123 13 C -0.138 4.138 14 C -0.134 4.134 15 C -0.136 4.136 16 C -0.118 4.118 17 C -0.188 4.188 18 C 0.031 3.969 19 H 0.129 0.871 20 F -0.182 7.182 21 C -0.199 4.199 22 C -0.120 4.120 23 C -0.083 4.083 24 C -0.052 4.052 25 C -0.181 4.181 26 O -0.349 6.349 27 Si 0.587 3.413 28 C -0.114 4.114 29 C -0.196 4.196 30 H 0.125 0.875 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.248 0.752 34 H 0.135 0.865 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.110 0.890 40 H 0.133 0.867 41 H 0.131 0.869 42 H 0.109 0.891 43 H 0.192 0.808 44 H 0.093 0.907 45 H 0.231 0.769 46 H -0.173 1.173 47 H -0.177 1.177 48 H 0.151 0.849 49 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -3.530 1.623 0.182 3.889 hybrid contribution -0.603 -0.555 -0.107 0.826 sum -4.132 1.068 0.075 4.269 Atomic orbital electron populations 1.23199 0.77284 1.04816 1.01798 1.86171 1.22184 1.25524 1.88380 1.17688 0.86504 0.85817 0.99471 1.18721 0.87410 0.86879 1.07011 1.84044 1.12620 1.34645 1.76184 1.21944 0.83820 0.92564 1.09156 1.16564 0.85481 0.81843 0.76949 1.90946 1.30035 1.67186 1.48292 1.45613 1.09221 1.05671 1.74849 1.19677 0.83680 0.92564 0.93162 1.19463 0.93883 1.01235 0.93186 1.20878 0.99580 0.99852 0.91941 1.21138 0.93977 0.99893 0.98767 1.21219 0.95573 0.99283 0.97304 1.21164 0.99934 0.99910 0.92546 1.21065 0.92908 0.98557 0.99315 1.23966 1.05412 0.94606 0.94818 1.23090 0.95417 0.89634 0.88758 0.87066 1.92835 1.78447 1.72045 1.74850 1.24094 1.01832 0.99301 0.94702 1.22703 0.94588 0.94310 1.00431 1.19389 0.92756 0.91970 1.04153 1.18443 0.92236 0.92352 1.02137 1.24660 1.05120 0.99240 0.89084 1.86521 1.77924 1.41987 1.28452 0.95117 0.79537 0.86733 0.79952 1.20426 0.93506 0.97465 1.00010 1.20931 1.00407 0.90433 1.07793 0.87506 0.92126 0.92091 0.75217 0.86488 0.85980 0.85944 0.85770 0.85606 0.89026 0.86666 0.86863 0.89072 0.80790 0.90714 0.76944 1.17343 1.17734 0.84910 0.83437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.63 10.50 -19.65 -0.21 -0.83 16 3 C 0.15 0.42 6.70 -39.13 -0.26 0.16 16 4 C 0.05 0.19 7.35 -38.24 -0.28 -0.09 16 5 O -0.17 -0.59 10.29 2.65 0.03 -0.57 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.61 1.69 7.29 -12.72 -0.09 1.59 16 8 O -0.49 -2.60 15.62 5.23 0.08 -2.52 16 9 N -0.70 -0.15 4.84 -49.12 -0.24 -0.39 16 10 C 0.20 0.04 0.82 -132.16 -0.11 -0.07 16 11 C -0.08 -0.14 4.24 -104.63 -0.44 -0.58 16 12 C -0.10 -0.20 9.46 -39.58 -0.37 -0.57 16 13 C -0.12 -0.21 10.05 -39.58 -0.40 -0.61 16 14 C -0.12 -0.19 10.05 -39.59 -0.40 -0.59 16 15 C -0.12 -0.20 10.05 -39.58 -0.40 -0.60 16 16 C -0.10 -0.19 9.22 -39.59 -0.37 -0.56 16 17 C -0.15 0.20 7.25 -25.91 -0.19 0.01 16 18 C 0.07 -0.02 5.58 -25.92 -0.14 -0.16 16 19 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 20 F -0.20 -0.49 17.41 2.25 0.04 -0.45 16 21 C -0.16 -0.05 6.44 -25.92 -0.17 -0.22 16 22 C -0.10 -0.31 10.68 -37.23 -0.40 -0.71 16 23 C -0.08 -0.30 6.16 -105.21 -0.65 -0.95 16 24 C -0.05 -0.14 5.30 -104.63 -0.55 -0.69 16 25 C -0.07 -0.01 2.69 36.00 0.10 0.08 16 26 O -0.54 -0.26 12.86 -35.23 -0.45 -0.71 16 27 Si 0.69 -1.00 30.20 -169.99 -5.13 -6.13 16 28 C -0.10 -0.19 8.62 -39.96 -0.34 -0.53 16 29 C -0.18 -0.22 9.03 -39.38 -0.36 -0.57 16 30 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 31 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 32 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 33 H 0.41 -0.66 8.38 -40.82 -0.34 -1.01 16 34 H 0.12 0.09 8.02 -52.48 -0.42 -0.33 16 35 H 0.12 0.02 8.06 -52.48 -0.42 -0.41 16 36 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 37 H 0.12 -0.01 8.06 -52.48 -0.42 -0.44 16 38 H 0.13 0.08 5.71 -52.48 -0.30 -0.22 16 39 H 0.09 -0.27 8.09 -51.93 -0.42 -0.69 16 40 H 0.12 -0.13 8.09 -51.93 -0.42 -0.55 16 41 H 0.11 -0.01 5.86 -51.93 -0.30 -0.31 16 42 H 0.09 0.11 7.57 -51.93 -0.39 -0.28 16 43 H 0.17 0.34 8.06 -52.49 -0.42 -0.08 16 44 H 0.07 -0.09 7.96 -51.92 -0.41 -0.50 16 45 H 0.38 -1.77 8.74 45.56 0.40 -1.37 16 46 H -0.25 -0.26 6.75 56.52 0.38 0.13 16 47 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 48 H 0.13 0.10 4.85 -52.49 -0.25 -0.15 16 49 H 0.15 -0.25 6.26 -52.48 -0.33 -0.57 16 LS Contribution 412.78 15.07 6.22 6.22 Total: 0.00 -9.58 412.78 -10.50 -20.08 By element: Atomic # 1 Polarization: -3.89 SS G_CDS: -5.75 Total: -9.64 kcal Atomic # 6 Polarization: 0.04 SS G_CDS: -5.09 Total: -5.05 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.24 Total: -0.39 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.55 Total: -4.63 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.13 Total: -6.13 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.58 -10.50 -20.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.517 kcal (2) G-P(sol) polarization free energy of solvation -9.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds