Wall clock time and date at job start Sat Mar 6 2021 20:42:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47084 * 2 1 4 4 C 1.50703 * 109.46760 * 119.99449 * 2 1 3 5 5 C 1.34237 * 126.50159 * 254.68753 * 4 2 1 6 6 N 1.36832 * 109.93666 * 179.83471 * 5 4 2 7 7 C 1.46500 * 125.06055 * 180.18683 * 6 5 4 8 8 C 1.50701 * 109.47094 * 265.30102 * 7 6 5 9 9 O 1.21284 * 120.00099 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99919 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00321 * 175.00967 * 10 8 7 12 12 C 1.50704 * 112.84671 * 65.10111 * 11 10 8 13 13 C 1.38241 * 119.99452 * 197.66482 * 12 11 10 14 14 C 1.38236 * 119.99395 * 179.81292 * 13 12 11 15 15 C 1.38236 * 120.00272 * 0.39277 * 14 13 12 16 16 C 1.38238 * 119.99815 * 359.86044 * 15 14 13 17 17 C 1.38230 * 120.00288 * 17.93713 * 12 11 10 18 18 C 1.53780 * 113.61175 * 293.91194 * 11 10 8 19 19 C 1.53778 * 87.07856 * 270.88029 * 18 11 10 20 20 H 1.08998 * 113.61708 * 89.20143 * 19 18 11 21 21 F 1.39901 * 113.61931 * 220.01790 * 19 18 11 22 22 C 1.53780 * 113.61782 * 196.30055 * 11 10 8 23 23 C 1.37693 * 109.87631 * 0.44965 * 6 5 4 24 24 C 1.39079 * 133.51307 * 179.68863 * 23 6 5 25 25 C 1.37792 * 119.77620 * 180.02562 * 24 23 6 26 26 C 1.38792 * 120.66589 * 359.97438 * 25 24 23 27 27 C 1.36658 * 120.52852 * 0.02811 * 26 25 24 28 28 C 1.39587 * 119.76298 * 359.97317 * 27 26 25 29 29 H 0.96691 * 114.00215 * 300.00268 * 1 2 3 30 30 H 1.08996 * 109.47463 * 239.99891 * 2 1 3 31 31 H 1.48503 * 110.00042 * 178.68017 * 3 2 1 32 32 H 1.48508 * 109.99622 * 299.99677 * 3 2 1 33 33 H 1.08009 * 125.02893 * 0.02562 * 5 4 2 34 34 H 1.09005 * 109.47200 * 25.29941 * 7 6 5 35 35 H 1.08998 * 109.47161 * 145.29961 * 7 6 5 36 36 H 0.97000 * 120.00486 * 355.00153 * 10 8 7 37 37 H 1.07995 * 120.00051 * 359.97438 * 13 12 11 38 38 H 1.08000 * 119.99621 * 180.22426 * 14 13 12 39 39 H 1.07998 * 119.99993 * 179.83100 * 15 14 13 40 40 H 1.08000 * 119.99692 * 179.97438 * 16 15 14 41 41 H 1.08002 * 120.00187 * 359.97438 * 17 12 11 42 42 H 1.08997 * 113.61699 * 25.42277 * 18 11 10 43 43 H 1.08994 * 113.61920 * 156.33189 * 18 11 10 44 44 H 1.08997 * 113.61365 * 203.66431 * 22 11 10 45 45 H 1.08998 * 113.61228 * 334.56293 * 22 11 10 46 46 H 1.07994 * 120.11291 * 0.05283 * 24 23 6 47 47 H 1.07995 * 119.66503 * 180.02562 * 25 24 23 48 48 H 1.07997 * 119.73391 * 180.02562 * 26 25 24 49 49 H 1.07998 * 120.11746 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4660 -0.1378 2.3206 6 7 2.8026 -1.0988 3.2347 7 6 3.4073 -0.8401 4.5438 8 6 4.9056 -0.9624 4.4381 9 8 5.4180 -1.2380 3.3739 10 7 5.6762 -0.7654 5.5261 11 6 7.1218 -0.9908 5.4505 12 6 7.8160 -0.0298 4.5201 13 6 9.0841 -0.3169 4.0502 14 6 9.7192 0.5628 3.1937 15 6 9.0898 1.7333 2.8135 16 6 7.8239 2.0228 3.2875 17 6 7.1871 1.1413 4.1410 18 6 7.5044 -2.4615 5.2146 19 6 7.5052 -2.6246 6.7437 20 1 6.5349 -2.9050 7.1535 21 9 8.5484 -3.4252 7.2214 22 6 7.7989 -1.1146 6.8257 23 6 2.4938 -2.3455 2.7386 24 6 2.6297 -3.6360 3.2392 25 6 2.2162 -4.7106 2.4823 26 6 1.6640 -4.5192 1.2234 27 6 1.5213 -3.2599 0.7122 28 6 1.9335 -2.1569 1.4618 29 1 -0.3933 0.4417 0.7649 30 1 1.7924 -0.5138 -0.8899 31 1 3.5346 1.7703 0.0321 32 1 1.5615 2.4678 -1.2086 33 1 2.6067 0.9243 2.4573 34 1 3.1472 0.1664 4.8717 35 1 3.0336 -1.5655 5.2664 36 1 5.2738 -0.4743 6.3593 37 1 9.5773 -1.2296 4.3503 38 1 10.7084 0.3368 2.8238 39 1 9.5872 2.4219 2.1465 40 1 7.3323 2.9375 2.9908 41 1 6.1981 1.3675 4.5112 42 1 6.7277 -3.0399 4.7143 43 1 8.4873 -2.5897 4.7613 44 1 8.8621 -0.8751 6.8120 45 1 7.2598 -0.6062 7.6250 46 1 3.0573 -3.7952 4.2179 47 1 2.3222 -5.7119 2.8729 48 1 1.3447 -5.3723 0.6432 49 1 1.0912 -3.1186 -0.2683 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:42:24 Heat of formation + Delta-G solvation = 22.658232 kcal Electronic energy + Delta-G solvation = -35565.440731 eV Core-core repulsion = 30954.456487 eV Total energy + Delta-G solvation = -4610.984244 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -48.65253 -42.59004 -41.88924 -39.84581 -38.69085 -37.99710 -37.49950 -34.63624 -33.92569 -32.02799 -31.79508 -31.31277 -30.14548 -29.00936 -27.33793 -26.28184 -25.45273 -23.78599 -23.53674 -22.88503 -22.50633 -21.88822 -20.63599 -20.48048 -18.78384 -18.66698 -18.40994 -17.69774 -17.46472 -17.25062 -16.88901 -16.63271 -16.36032 -16.30692 -16.00196 -15.93162 -15.70602 -15.52076 -15.32099 -15.19449 -14.72620 -14.61957 -14.44597 -14.36597 -14.14855 -13.94204 -13.92524 -13.72798 -13.65813 -13.48861 -13.28060 -12.70221 -12.61079 -12.48506 -12.35291 -12.13428 -12.03269 -11.98852 -11.81814 -11.69996 -11.58660 -11.14057 -10.45596 -10.42996 -10.24264 -9.84551 -9.63560 -9.04933 -8.55647 -5.04917 0.25017 0.36040 0.47486 0.75946 1.29705 1.32501 1.38744 1.63679 1.75866 1.95221 2.05268 2.68254 2.96690 3.08162 3.09802 3.28821 3.30705 3.42224 3.49022 3.59081 3.62454 3.72293 3.75186 3.82903 3.93001 3.99413 4.03990 4.07353 4.17647 4.29029 4.33683 4.35258 4.41233 4.41907 4.55743 4.56154 4.59736 4.68926 4.73790 4.77027 4.86606 4.87767 4.96087 4.99335 5.08263 5.20273 5.22788 5.51216 5.59601 5.61895 5.62335 5.77951 5.83350 5.87499 6.02968 6.05900 6.25707 6.33223 6.74028 6.92558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.028 4.028 3 Si 0.680 3.320 4 C -0.196 4.196 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.491 6.491 10 N -0.714 5.714 11 C 0.198 3.802 12 C -0.070 4.070 13 C -0.112 4.112 14 C -0.115 4.115 15 C -0.118 4.118 16 C -0.118 4.118 17 C -0.099 4.099 18 C -0.157 4.157 19 C 0.067 3.933 20 H 0.111 0.889 21 F -0.202 7.202 22 C -0.150 4.150 23 C 0.110 3.890 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.145 4.145 27 C -0.066 4.066 28 C -0.086 4.086 29 H 0.376 0.624 30 H 0.111 0.889 31 H -0.255 1.255 32 H -0.254 1.254 33 H 0.170 0.830 34 H 0.123 0.877 35 H 0.119 0.881 36 H 0.406 0.594 37 H 0.123 0.877 38 H 0.124 0.876 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.113 0.887 42 H 0.088 0.912 43 H 0.108 0.892 44 H 0.113 0.887 45 H 0.091 0.909 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.458 3.681 7.061 8.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.582 3.418 4 C -0.204 4.204 5 C -0.055 4.055 6 N -0.149 5.149 7 C -0.034 4.034 8 C 0.273 3.727 9 O -0.362 6.362 10 N -0.369 5.369 11 C 0.111 3.889 12 C -0.071 4.071 13 C -0.130 4.130 14 C -0.133 4.133 15 C -0.136 4.136 16 C -0.136 4.136 17 C -0.117 4.117 18 C -0.195 4.195 19 C 0.031 3.969 20 H 0.128 0.872 21 F -0.182 7.182 22 C -0.188 4.188 23 C 0.005 3.995 24 C -0.149 4.149 25 C -0.115 4.115 26 C -0.164 4.164 27 C -0.084 4.084 28 C -0.090 4.090 29 H 0.223 0.777 30 H 0.128 0.872 31 H -0.180 1.180 32 H -0.179 1.179 33 H 0.187 0.813 34 H 0.141 0.859 35 H 0.137 0.863 36 H 0.241 0.759 37 H 0.141 0.859 38 H 0.142 0.858 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.131 0.869 42 H 0.107 0.893 43 H 0.127 0.873 44 H 0.131 0.869 45 H 0.110 0.890 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.373 3.811 5.584 6.770 hybrid contribution 0.101 -0.481 0.324 0.588 sum -0.272 3.330 5.907 6.786 Atomic orbital electron populations 1.86503 1.17495 1.81754 1.48907 1.24321 0.84636 1.08721 0.96311 0.95466 0.81019 0.77579 0.87739 1.20631 1.09905 0.92397 0.97458 1.21484 1.00951 0.93811 0.89296 1.43174 1.52696 1.04682 1.14347 1.21580 0.90476 1.05952 0.85401 1.21069 0.89412 0.77832 0.84358 1.90864 1.74269 1.44016 1.27062 1.45674 1.06200 1.70949 1.14047 1.19621 0.79987 0.94028 0.95267 1.19477 0.94527 0.94874 0.98270 1.20948 0.94511 0.99594 0.97936 1.21141 1.00106 0.94394 0.97703 1.21206 0.95343 0.97293 0.99789 1.21138 0.95358 0.99521 0.97590 1.20786 0.99229 0.93827 0.97888 1.24064 1.04723 0.95169 0.95556 1.23163 0.89425 0.89174 0.95132 0.87163 1.92840 1.60150 1.75584 1.89631 1.24040 1.03546 0.95614 0.95599 1.18143 1.01226 0.85805 0.94296 1.19933 1.05089 0.89254 1.00586 1.20825 0.98295 0.97945 0.94479 1.20671 1.02407 0.96937 0.96422 1.20311 0.97967 0.90969 0.99167 1.18938 1.03330 0.92795 0.93960 0.77729 0.87195 1.18000 1.17874 0.81287 0.85888 0.86328 0.75863 0.85896 0.85782 0.85972 0.86097 0.86862 0.89341 0.87346 0.86873 0.89049 0.86819 0.85746 0.85942 0.85995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.79 12.88 -35.23 -0.45 -1.24 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.19 30.75 -169.99 -5.23 -5.42 16 4 C -0.20 -0.42 5.58 -102.71 -0.57 -0.99 16 5 C 0.07 0.01 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.17 2.27 -115.71 -0.26 -0.43 16 7 C 0.09 -0.33 6.48 -5.19 -0.03 -0.36 16 8 C 0.49 -0.56 6.48 -10.99 -0.07 -0.63 16 9 O -0.49 -1.99 14.92 5.55 0.08 -1.91 16 10 N -0.71 2.59 4.29 -47.92 -0.21 2.39 16 11 C 0.20 -0.31 0.92 -132.16 -0.12 -0.43 16 12 C -0.07 -0.05 4.51 -104.62 -0.47 -0.52 16 13 C -0.11 -0.13 8.94 -39.58 -0.35 -0.48 16 14 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 15 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 16 C -0.12 -0.15 10.05 -39.58 -0.40 -0.54 16 17 C -0.10 -0.10 8.65 -39.59 -0.34 -0.44 16 18 C -0.16 0.07 6.72 -25.92 -0.17 -0.11 16 19 C 0.07 -0.12 5.58 -25.78 -0.14 -0.26 16 20 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 21 F -0.20 -0.30 17.41 2.25 0.04 -0.26 16 22 C -0.15 0.44 7.21 -25.78 -0.19 0.26 16 23 C 0.11 0.32 6.80 -83.99 -0.57 -0.26 16 24 C -0.13 -0.27 10.00 -39.43 -0.39 -0.66 16 25 C -0.10 -0.20 10.01 -39.54 -0.40 -0.59 16 26 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 27 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 28 C -0.09 -0.34 6.35 -105.14 -0.67 -1.01 16 29 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 30 H 0.11 0.27 7.96 -51.93 -0.41 -0.14 16 31 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 32 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 33 H 0.17 -0.56 6.34 -52.48 -0.33 -0.90 16 34 H 0.12 -0.87 8.12 -51.93 -0.42 -1.29 16 35 H 0.12 -0.67 8.14 -51.93 -0.42 -1.09 16 36 H 0.41 -2.89 8.66 -40.82 -0.35 -3.24 16 37 H 0.12 -0.03 6.29 -52.49 -0.33 -0.36 16 38 H 0.12 -0.05 8.06 -52.49 -0.42 -0.48 16 39 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 40 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 41 H 0.11 -0.07 6.89 -52.49 -0.36 -0.43 16 42 H 0.09 0.09 7.57 -51.93 -0.39 -0.30 16 43 H 0.11 0.01 6.02 -51.93 -0.31 -0.31 16 44 H 0.11 -0.26 7.93 -51.93 -0.41 -0.67 16 45 H 0.09 -0.45 8.09 -51.93 -0.42 -0.87 16 46 H 0.11 0.00 8.06 -52.49 -0.42 -0.42 16 47 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.36 8.06 -52.49 -0.42 -0.07 16 LS Contribution 409.35 15.07 6.17 6.17 Total: 0.00 -11.93 409.35 -12.76 -24.69 By element: Atomic # 1 Polarization: -8.00 SS G_CDS: -6.36 Total: -14.35 kcal Atomic # 6 Polarization: -3.09 SS G_CDS: -6.55 Total: -9.63 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -0.47 Total: 1.96 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -0.37 Total: -3.15 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.26 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.23 Total: -5.42 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.93 -12.76 -24.69 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.347 kcal (2) G-P(sol) polarization free energy of solvation -11.928 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.689 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds