Wall clock time and date at job start Sat Mar 6 2021 20:42:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47084 * 2 1 4 4 C 1.50703 * 109.46760 * 119.99449 * 2 1 3 5 5 C 1.34237 * 126.50159 * 254.68753 * 4 2 1 6 6 N 1.36832 * 109.93666 * 179.83471 * 5 4 2 7 7 C 1.46500 * 125.06055 * 180.18683 * 6 5 4 8 8 C 1.50701 * 109.47094 * 265.30102 * 7 6 5 9 9 O 1.21284 * 120.00099 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99919 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00321 * 175.00967 * 10 8 7 12 12 C 1.50704 * 112.84671 * 65.10111 * 11 10 8 13 13 C 1.38241 * 119.99452 * 197.66482 * 12 11 10 14 14 C 1.38236 * 119.99395 * 179.81292 * 13 12 11 15 15 C 1.38236 * 120.00272 * 0.39277 * 14 13 12 16 16 C 1.38238 * 119.99815 * 359.86044 * 15 14 13 17 17 C 1.38230 * 120.00288 * 17.93713 * 12 11 10 18 18 C 1.53780 * 113.61175 * 293.91194 * 11 10 8 19 19 C 1.53778 * 87.07856 * 270.88029 * 18 11 10 20 20 H 1.08998 * 113.61708 * 89.20143 * 19 18 11 21 21 F 1.39901 * 113.61931 * 220.01790 * 19 18 11 22 22 C 1.53780 * 113.61782 * 196.30055 * 11 10 8 23 23 C 1.37693 * 109.87631 * 0.44965 * 6 5 4 24 24 C 1.39079 * 133.51307 * 179.68863 * 23 6 5 25 25 C 1.37792 * 119.77620 * 180.02562 * 24 23 6 26 26 C 1.38792 * 120.66589 * 359.97438 * 25 24 23 27 27 C 1.36658 * 120.52852 * 0.02811 * 26 25 24 28 28 C 1.39587 * 119.76298 * 359.97317 * 27 26 25 29 29 H 0.96691 * 114.00215 * 300.00268 * 1 2 3 30 30 H 1.08996 * 109.47463 * 239.99891 * 2 1 3 31 31 H 1.48503 * 110.00042 * 178.68017 * 3 2 1 32 32 H 1.48508 * 109.99622 * 299.99677 * 3 2 1 33 33 H 1.08009 * 125.02893 * 0.02562 * 5 4 2 34 34 H 1.09005 * 109.47200 * 25.29941 * 7 6 5 35 35 H 1.08998 * 109.47161 * 145.29961 * 7 6 5 36 36 H 0.97000 * 120.00486 * 355.00153 * 10 8 7 37 37 H 1.07995 * 120.00051 * 359.97438 * 13 12 11 38 38 H 1.08000 * 119.99621 * 180.22426 * 14 13 12 39 39 H 1.07998 * 119.99993 * 179.83100 * 15 14 13 40 40 H 1.08000 * 119.99692 * 179.97438 * 16 15 14 41 41 H 1.08002 * 120.00187 * 359.97438 * 17 12 11 42 42 H 1.08997 * 113.61699 * 25.42277 * 18 11 10 43 43 H 1.08994 * 113.61920 * 156.33189 * 18 11 10 44 44 H 1.08997 * 113.61365 * 203.66431 * 22 11 10 45 45 H 1.08998 * 113.61228 * 334.56293 * 22 11 10 46 46 H 1.07994 * 120.11291 * 0.05283 * 24 23 6 47 47 H 1.07995 * 119.66503 * 180.02562 * 25 24 23 48 48 H 1.07997 * 119.73391 * 180.02562 * 26 25 24 49 49 H 1.07998 * 120.11746 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4660 -0.1378 2.3206 6 7 2.8026 -1.0988 3.2347 7 6 3.4073 -0.8401 4.5438 8 6 4.9056 -0.9624 4.4381 9 8 5.4180 -1.2380 3.3739 10 7 5.6762 -0.7654 5.5261 11 6 7.1218 -0.9908 5.4505 12 6 7.8160 -0.0298 4.5201 13 6 9.0841 -0.3169 4.0502 14 6 9.7192 0.5628 3.1937 15 6 9.0898 1.7333 2.8135 16 6 7.8239 2.0228 3.2875 17 6 7.1871 1.1413 4.1410 18 6 7.5044 -2.4615 5.2146 19 6 7.5052 -2.6246 6.7437 20 1 6.5349 -2.9050 7.1535 21 9 8.5484 -3.4252 7.2214 22 6 7.7989 -1.1146 6.8257 23 6 2.4938 -2.3455 2.7386 24 6 2.6297 -3.6360 3.2392 25 6 2.2162 -4.7106 2.4823 26 6 1.6640 -4.5192 1.2234 27 6 1.5213 -3.2599 0.7122 28 6 1.9335 -2.1569 1.4618 29 1 -0.3933 0.4417 0.7649 30 1 1.7924 -0.5138 -0.8899 31 1 3.5346 1.7703 0.0321 32 1 1.5615 2.4678 -1.2086 33 1 2.6067 0.9243 2.4573 34 1 3.1472 0.1664 4.8717 35 1 3.0336 -1.5655 5.2664 36 1 5.2738 -0.4743 6.3593 37 1 9.5773 -1.2296 4.3503 38 1 10.7084 0.3368 2.8238 39 1 9.5872 2.4219 2.1465 40 1 7.3323 2.9375 2.9908 41 1 6.1981 1.3675 4.5112 42 1 6.7277 -3.0399 4.7143 43 1 8.4873 -2.5897 4.7613 44 1 8.8621 -0.8751 6.8120 45 1 7.2598 -0.6062 7.6250 46 1 3.0573 -3.7952 4.2179 47 1 2.3222 -5.7119 2.8729 48 1 1.3447 -5.3723 0.6432 49 1 1.0912 -3.1186 -0.2683 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:42:23 Heat of formation + Delta-G solvation = 24.254048 kcal Electronic energy + Delta-G solvation = -35565.371532 eV Core-core repulsion = 30954.456487 eV Total energy + Delta-G solvation = -4610.915045 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -48.64210 -42.57588 -41.82122 -39.82044 -38.63906 -38.07726 -37.55290 -34.53731 -33.88898 -32.02123 -31.80600 -31.35435 -30.23313 -28.95521 -27.19798 -26.25279 -25.42026 -23.83650 -23.57049 -22.90123 -22.50190 -21.80335 -20.66055 -20.38400 -18.67518 -18.63750 -18.35528 -17.70298 -17.36765 -17.22651 -16.82938 -16.59163 -16.44014 -16.25898 -15.99515 -15.92591 -15.71867 -15.52121 -15.35869 -15.17913 -14.79573 -14.70653 -14.45217 -14.35974 -14.09664 -14.05488 -13.92694 -13.64696 -13.55358 -13.41429 -13.10574 -12.71849 -12.63744 -12.57685 -12.32022 -12.27218 -12.12698 -11.98562 -11.82695 -11.70511 -11.46036 -11.11114 -10.55130 -10.31696 -10.30241 -9.88514 -9.64280 -9.15380 -8.62169 -5.07513 0.14042 0.33892 0.43542 0.62610 1.32735 1.39872 1.48073 1.63197 1.74955 1.99081 2.10004 2.70149 2.94056 3.13571 3.21018 3.40608 3.48749 3.59978 3.64119 3.69944 3.74108 3.81220 3.87942 3.98367 4.02165 4.05065 4.14090 4.18877 4.19384 4.21262 4.29873 4.47212 4.47742 4.54623 4.55442 4.55998 4.65587 4.68351 4.71317 4.78044 4.78947 4.87824 4.98149 5.00598 5.10277 5.12790 5.31839 5.48674 5.49849 5.56104 5.64227 5.65387 5.72543 5.75005 6.03069 6.19870 6.23867 6.47414 6.88724 7.16571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.041 4.041 3 Si 0.801 3.199 4 C -0.226 4.226 5 C 0.083 3.917 6 N -0.463 5.463 7 C 0.087 3.913 8 C 0.492 3.508 9 O -0.549 6.549 10 N -0.694 5.694 11 C 0.202 3.798 12 C -0.077 4.077 13 C -0.129 4.129 14 C -0.131 4.131 15 C -0.135 4.135 16 C -0.132 4.132 17 C -0.108 4.108 18 C -0.165 4.165 19 C 0.068 3.932 20 H 0.136 0.864 21 F -0.221 7.221 22 C -0.138 4.138 23 C 0.094 3.906 24 C -0.131 4.131 25 C -0.110 4.110 26 C -0.155 4.155 27 C -0.093 4.093 28 C -0.117 4.117 29 H 0.393 0.607 30 H 0.085 0.915 31 H -0.294 1.294 32 H -0.299 1.299 33 H 0.208 0.792 34 H 0.170 0.830 35 H 0.146 0.854 36 H 0.427 0.573 37 H 0.127 0.873 38 H 0.133 0.867 39 H 0.132 0.868 40 H 0.135 0.865 41 H 0.131 0.869 42 H 0.071 0.929 43 H 0.094 0.906 44 H 0.105 0.895 45 H 0.122 0.878 46 H 0.135 0.865 47 H 0.144 0.856 48 H 0.133 0.867 49 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.230 5.115 10.072 11.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.707 3.293 4 C -0.234 4.234 5 C -0.043 4.043 6 N -0.146 5.146 7 C -0.037 4.037 8 C 0.277 3.723 9 O -0.425 6.425 10 N -0.350 5.350 11 C 0.114 3.886 12 C -0.078 4.078 13 C -0.147 4.147 14 C -0.149 4.149 15 C -0.153 4.153 16 C -0.149 4.149 17 C -0.126 4.126 18 C -0.203 4.203 19 C 0.032 3.968 20 H 0.154 0.846 21 F -0.202 7.202 22 C -0.175 4.175 23 C -0.011 4.011 24 C -0.151 4.151 25 C -0.129 4.129 26 C -0.174 4.174 27 C -0.111 4.111 28 C -0.121 4.121 29 H 0.243 0.757 30 H 0.103 0.897 31 H -0.222 1.222 32 H -0.227 1.227 33 H 0.224 0.776 34 H 0.187 0.813 35 H 0.164 0.836 36 H 0.267 0.733 37 H 0.145 0.855 38 H 0.151 0.849 39 H 0.150 0.850 40 H 0.153 0.847 41 H 0.149 0.851 42 H 0.089 0.911 43 H 0.113 0.887 44 H 0.123 0.877 45 H 0.140 0.860 46 H 0.153 0.847 47 H 0.162 0.838 48 H 0.151 0.849 49 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -1.175 5.234 8.684 10.207 hybrid contribution 0.378 -0.967 -0.664 1.232 sum -0.797 4.267 8.019 9.119 Atomic orbital electron populations 1.86452 1.17746 1.82386 1.50225 1.24564 0.84727 1.10370 0.95426 0.94199 0.76635 0.73504 0.84971 1.20763 1.12005 0.91904 0.98698 1.22033 0.98605 0.95327 0.88314 1.43409 1.51941 1.03649 1.15572 1.22037 0.88206 1.09521 0.83924 1.21511 0.90478 0.76493 0.83777 1.90865 1.75411 1.46834 1.29355 1.45484 1.05124 1.69852 1.14534 1.19520 0.81049 0.92471 0.95583 1.19747 0.94395 0.95283 0.98352 1.21159 0.95259 0.99904 0.98375 1.21378 1.00771 0.94707 0.98039 1.21444 0.95869 0.97652 1.00340 1.21433 0.95475 1.00305 0.97737 1.21047 0.99965 0.93772 0.97834 1.24053 1.03505 0.96149 0.96638 1.23406 0.89833 0.89723 0.93835 0.84637 1.92800 1.61346 1.76325 1.89756 1.23970 1.03399 0.94704 0.95464 1.18336 1.01449 0.87088 0.94235 1.20235 1.04433 0.89037 1.01404 1.21114 0.98353 0.99103 0.94316 1.20890 1.02468 0.96914 0.97092 1.20428 0.99415 0.91932 0.99348 1.19356 1.03964 0.93841 0.94982 0.75680 0.89698 1.22165 1.22666 0.77592 0.81306 0.83606 0.73309 0.85517 0.84949 0.84972 0.84710 0.85083 0.91057 0.88746 0.87703 0.85954 0.84697 0.83847 0.84916 0.86852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.26 12.88 -148.98 -1.92 -4.18 16 2 C -0.04 -0.17 3.06 71.24 0.22 0.05 16 3 Si 0.80 -0.51 30.75 68.60 2.11 1.60 16 4 C -0.23 -1.14 5.58 -18.62 -0.10 -1.24 16 5 C 0.08 -0.08 9.89 83.00 0.82 0.74 16 6 N -0.46 0.38 2.27 -519.99 -1.18 -0.80 16 7 C 0.09 -0.92 6.48 85.63 0.56 -0.37 16 8 C 0.49 -2.11 6.48 87.66 0.57 -1.54 16 9 O -0.55 -4.37 14.92 -3.04 -0.05 -4.42 16 10 N -0.69 6.83 4.29 -423.91 -1.82 5.01 16 11 C 0.20 -0.84 0.92 3.38 0.00 -0.84 16 12 C -0.08 -0.11 4.51 -19.86 -0.09 -0.20 16 13 C -0.13 -0.44 8.94 22.27 0.20 -0.24 16 14 C -0.13 -0.50 10.05 22.27 0.22 -0.27 16 15 C -0.14 -0.46 10.05 22.27 0.22 -0.23 16 16 C -0.13 -0.32 10.05 22.27 0.22 -0.10 16 17 C -0.11 -0.13 8.65 22.27 0.19 0.06 16 18 C -0.16 0.07 6.72 31.12 0.21 0.28 16 19 C 0.07 -0.31 5.58 31.21 0.17 -0.14 16 20 H 0.14 -1.33 8.14 -2.39 -0.02 -1.35 16 21 F -0.22 -0.62 17.41 44.97 0.78 0.16 16 22 C -0.14 1.05 7.21 31.21 0.23 1.27 16 23 C 0.09 0.55 6.80 39.03 0.27 0.82 16 24 C -0.13 -0.55 10.00 22.37 0.22 -0.32 16 25 C -0.11 -0.53 10.01 22.30 0.22 -0.31 16 26 C -0.15 -1.11 9.97 22.03 0.22 -0.89 16 27 C -0.09 -0.95 10.05 22.23 0.22 -0.72 16 28 C -0.12 -1.13 6.35 -20.20 -0.13 -1.26 16 29 H 0.39 -2.09 8.70 -74.06 -0.64 -2.74 16 30 H 0.09 0.69 7.96 -2.39 -0.02 0.68 16 31 H -0.29 -1.71 7.11 99.48 0.71 -1.01 16 32 H -0.30 -1.98 7.11 99.48 0.71 -1.27 16 33 H 0.21 -2.01 6.34 -2.91 -0.02 -2.03 16 34 H 0.17 -3.31 8.12 -2.38 -0.02 -3.33 16 35 H 0.15 -2.27 8.14 -2.39 -0.02 -2.29 16 36 H 0.43 -7.85 8.66 -92.71 -0.80 -8.66 16 37 H 0.13 0.18 6.29 -2.91 -0.02 0.16 16 38 H 0.13 0.09 8.06 -2.91 -0.02 0.06 16 39 H 0.13 0.02 8.06 -2.91 -0.02 -0.01 16 40 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 41 H 0.13 -0.45 6.89 -2.91 -0.02 -0.47 16 42 H 0.07 0.21 7.57 -2.39 -0.02 0.20 16 43 H 0.09 0.19 6.02 -2.39 -0.01 0.17 16 44 H 0.10 -0.56 7.93 -2.39 -0.02 -0.58 16 45 H 0.12 -1.67 8.09 -2.39 -0.02 -1.69 16 46 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 47 H 0.14 -0.02 8.06 -2.91 -0.02 -0.04 16 48 H 0.13 0.47 8.06 -2.91 -0.02 0.44 16 49 H 0.11 1.13 8.06 -2.91 -0.02 1.10 16 Total: 0.00 -33.28 409.35 2.20 -31.08 By element: Atomic # 1 Polarization: -22.62 SS G_CDS: -0.40 Total: -23.02 kcal Atomic # 6 Polarization: -10.11 SS G_CDS: 4.67 Total: -5.44 kcal Atomic # 7 Polarization: 7.21 SS G_CDS: -3.00 Total: 4.21 kcal Atomic # 8 Polarization: -6.63 SS G_CDS: -1.96 Total: -8.60 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.78 Total: 0.16 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: 2.11 Total: 1.60 kcal Total: -33.28 2.20 -31.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.337 kcal (2) G-P(sol) polarization free energy of solvation -33.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds