Wall clock time and date at job start Sat Mar 6 2021 20:42:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36766 * 125.80323 * 2 1 4 4 C 1.47267 * 126.94191 * 359.97438 * 3 2 1 5 5 O 1.21630 * 119.99650 * 359.71990 * 4 3 2 6 6 N 1.34774 * 119.99899 * 179.71077 * 4 3 2 7 7 C 1.46506 * 120.00022 * 185.14302 * 6 4 3 8 8 C 1.50705 * 112.84843 * 65.78301 * 7 6 4 9 9 C 1.38233 * 119.99753 * 7.03785 * 8 7 6 10 10 C 1.38237 * 119.99455 * 180.27278 * 9 8 7 11 11 C 1.38231 * 120.00094 * 359.47054 * 10 9 8 12 12 C 1.38233 * 120.00181 * 0.25202 * 11 10 9 13 13 C 1.38230 * 119.99586 * 186.75577 * 8 7 6 14 14 C 1.53787 * 113.68994 * 294.52163 * 7 6 4 15 15 C 1.53783 * 87.07559 * 270.87282 * 14 7 6 16 16 H 1.08994 * 113.62225 * 89.12018 * 15 14 7 17 17 F 1.39911 * 113.68649 * 220.00793 * 15 14 7 18 18 C 1.53779 * 87.08460 * 334.56576 * 15 14 7 19 19 C 1.46682 * 106.11747 * 179.72105 * 3 2 1 20 20 C 1.34487 * 106.33140 * 0.23958 * 19 3 2 21 21 C 1.50700 * 125.57102 * 180.02562 * 20 19 3 22 22 O 1.42904 * 109.46699 * 299.99221 * 21 20 19 23 23 Si 1.86308 * 109.47057 * 179.97438 * 21 20 19 24 24 N 1.34653 * 125.80107 * 180.12796 * 2 1 3 25 25 H 1.08995 * 109.46780 * 90.00154 * 1 2 3 26 26 H 1.08993 * 109.46972 * 210.00832 * 1 2 3 27 27 H 1.09003 * 109.46610 * 330.00453 * 1 2 3 28 28 H 0.96999 * 120.00489 * 5.14752 * 6 4 3 29 29 H 1.08002 * 120.00273 * 0.02562 * 9 8 7 30 30 H 1.08003 * 120.00063 * 179.73984 * 10 9 8 31 31 H 1.08004 * 120.00079 * 180.27715 * 11 10 9 32 32 H 1.07997 * 120.00063 * 180.02562 * 12 11 10 33 33 H 1.07999 * 120.00876 * 0.02562 * 13 8 7 34 34 H 1.08997 * 113.61278 * 25.41263 * 14 7 6 35 35 H 1.08991 * 113.61317 * 156.32266 * 14 7 6 36 36 H 1.08997 * 113.61499 * 270.88852 * 18 15 14 37 37 H 1.08995 * 113.61534 * 139.98332 * 18 15 14 38 38 H 1.08001 * 126.83433 * 180.21573 * 19 3 2 39 39 H 1.08995 * 109.47325 * 59.99457 * 21 20 19 40 40 H 0.96694 * 114.00173 * 299.99641 * 22 21 20 41 41 H 1.48493 * 109.99850 * 179.97438 * 23 21 20 42 42 H 1.48493 * 109.99705 * 301.31588 * 23 21 20 43 43 H 0.97006 * 124.85272 * 0.06602 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0062 6 7 2.7851 3.5053 0.0054 7 6 2.3537 4.9009 0.1187 8 6 1.7149 5.2099 1.4482 9 6 1.7206 4.2623 2.4546 10 6 1.1297 4.5437 3.6722 11 6 0.5428 5.7766 3.8871 12 6 0.5421 6.7263 2.8826 13 6 1.1285 6.4430 1.6632 14 6 1.5366 5.3948 -1.0869 15 6 2.8742 5.8045 -1.7256 16 1 3.3370 5.0134 -2.3154 17 9 2.8223 7.0276 -2.4030 18 6 3.4326 5.9148 -0.2970 19 6 3.6882 0.6151 0.0069 20 6 3.6096 -0.7275 0.0050 21 6 4.7819 -1.6743 0.0108 22 8 5.5824 -1.4483 -1.1513 23 14 4.1614 -3.4310 0.0061 24 7 2.2947 -1.0921 -0.0024 25 1 -0.3633 0.0000 -1.0276 26 1 -0.3633 -0.8899 0.5139 27 1 -0.3633 0.8901 0.5138 28 1 3.7291 3.2938 -0.0653 29 1 2.1832 3.3006 2.2882 30 1 1.1305 3.8018 4.4571 31 1 0.0851 5.9981 4.8399 32 1 0.0839 7.6897 3.0506 33 1 1.1276 7.1849 0.8783 34 1 1.0233 4.5965 -1.6230 35 1 0.8859 6.2384 -0.8572 36 1 3.3001 6.9007 0.1487 37 1 4.4497 5.5365 -0.1953 38 1 4.5890 1.2109 0.0120 39 1 5.3823 -1.5038 0.9043 40 1 5.1116 -1.5822 -1.9852 41 1 5.3080 -4.3746 0.0111 42 1 3.3019 -3.6691 1.1933 43 1 1.9734 -2.0074 -0.0054 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:42:28 Heat of formation + Delta-G solvation = -10.287989 kcal Electronic energy + Delta-G solvation = -28730.530981 eV Core-core repulsion = 24658.334121 eV Total energy + Delta-G solvation = -4072.196859 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -48.47790 -42.59509 -41.62345 -39.41147 -38.37709 -37.83713 -34.28820 -32.85623 -32.20521 -31.72583 -31.49106 -29.01765 -27.09011 -26.37056 -25.31667 -23.74552 -23.25649 -22.36702 -21.66452 -20.71494 -20.16503 -18.77834 -18.43695 -17.75972 -17.26977 -17.13823 -16.75742 -16.57292 -16.46804 -15.89627 -15.73137 -15.58889 -15.46338 -15.14503 -14.84617 -14.58757 -14.50583 -14.17709 -14.16546 -13.93107 -13.85156 -13.74841 -13.52094 -13.45419 -13.17170 -12.77156 -12.65030 -12.50050 -12.31835 -12.22233 -11.84631 -11.59874 -11.38840 -10.83756 -10.55306 -10.12634 -9.91554 -9.71155 -9.49532 -9.20457 -5.37053 0.49472 0.60680 0.72079 0.95672 1.16908 1.32251 1.67534 1.88667 2.25541 2.58476 2.84523 3.20413 3.23021 3.29755 3.50682 3.54360 3.65057 3.76815 3.80072 3.99253 4.14104 4.15308 4.16291 4.25588 4.30042 4.32652 4.44148 4.54978 4.59033 4.63724 4.64975 4.69131 4.71035 4.79806 4.95179 4.98866 5.08507 5.13299 5.21850 5.23411 5.48706 5.64345 5.64925 5.72155 5.79250 5.84181 6.17077 6.25436 6.37411 6.60497 7.41755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.127 3.873 3 C -0.243 4.243 4 C 0.596 3.404 5 O -0.530 6.530 6 N -0.713 5.713 7 C 0.200 3.800 8 C -0.071 4.071 9 C -0.097 4.097 10 C -0.119 4.119 11 C -0.120 4.120 12 C -0.118 4.118 13 C -0.112 4.112 14 C -0.153 4.153 15 C 0.066 3.934 16 H 0.111 0.889 17 F -0.204 7.204 18 C -0.153 4.153 19 C -0.129 4.129 20 C -0.028 4.028 21 C -0.033 4.033 22 O -0.533 6.533 23 Si 0.671 3.329 24 N -0.545 5.545 25 H 0.083 0.917 26 H 0.066 0.934 27 H 0.104 0.896 28 H 0.404 0.596 29 H 0.117 0.883 30 H 0.120 0.880 31 H 0.121 0.879 32 H 0.123 0.877 33 H 0.123 0.877 34 H 0.093 0.907 35 H 0.105 0.895 36 H 0.112 0.888 37 H 0.089 0.911 38 H 0.147 0.853 39 H 0.125 0.875 40 H 0.381 0.619 41 H -0.243 1.243 42 H -0.252 1.252 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.720 -3.886 -0.669 4.009 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.008 3.992 3 C -0.253 4.253 4 C 0.386 3.614 5 O -0.407 6.407 6 N -0.365 5.365 7 C 0.112 3.888 8 C -0.072 4.072 9 C -0.115 4.115 10 C -0.137 4.137 11 C -0.138 4.138 12 C -0.136 4.136 13 C -0.130 4.130 14 C -0.191 4.191 15 C 0.029 3.971 16 H 0.128 0.872 17 F -0.184 7.184 18 C -0.191 4.191 19 C -0.153 4.153 20 C -0.136 4.136 21 C -0.145 4.145 22 O -0.338 6.338 23 Si 0.572 3.428 24 N -0.144 5.144 25 H 0.101 0.899 26 H 0.085 0.915 27 H 0.123 0.877 28 H 0.240 0.760 29 H 0.135 0.865 30 H 0.138 0.862 31 H 0.139 0.861 32 H 0.141 0.859 33 H 0.141 0.859 34 H 0.112 0.888 35 H 0.123 0.877 36 H 0.130 0.870 37 H 0.108 0.892 38 H 0.164 0.836 39 H 0.143 0.857 40 H 0.229 0.771 41 H -0.167 1.167 42 H -0.177 1.177 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.319 -4.474 0.186 4.489 hybrid contribution 0.623 -0.094 0.355 0.723 sum 0.942 -4.568 0.541 4.695 Atomic orbital electron populations 1.20665 0.86516 1.04617 1.03960 1.20402 0.93777 0.85240 0.99798 1.20061 0.93057 0.91852 1.20302 1.17272 0.85287 0.83763 0.75104 1.90793 1.16301 1.84119 1.49490 1.45457 1.10205 1.04242 1.76586 1.19556 0.95541 0.81432 0.92264 1.19562 0.99133 0.94437 0.94063 1.20912 0.98972 0.98757 0.92889 1.21138 0.98320 0.97039 0.97217 1.21184 0.99550 0.93829 0.99243 1.21116 0.99565 0.99533 0.93355 1.20904 0.98430 0.96173 0.97542 1.24021 0.96620 1.02804 0.95661 1.23138 0.98945 0.83449 0.91523 0.87160 1.92828 1.97180 1.46218 1.82211 1.24016 0.99188 1.00593 0.95307 1.21788 0.95626 0.92616 1.05293 1.20540 0.84358 0.95729 1.12991 1.24402 0.91622 1.06510 0.91970 1.86547 1.38937 1.92982 1.15345 0.95396 0.84192 0.75665 0.87530 1.41728 1.05564 1.08489 1.58662 0.89891 0.91516 0.87749 0.76023 0.86523 0.86237 0.86086 0.85862 0.85930 0.88828 0.87696 0.87008 0.89242 0.83564 0.85750 0.77143 1.16683 1.17676 0.74728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.88 36.01 0.36 0.43 16 2 C 0.13 0.01 7.17 -81.88 -0.59 -0.58 16 3 C -0.24 -0.23 6.29 -103.35 -0.65 -0.88 16 4 C 0.60 1.21 5.77 -12.59 -0.07 1.13 16 5 O -0.53 -2.56 13.06 5.25 0.07 -2.49 16 6 N -0.71 0.12 4.43 -49.03 -0.22 -0.10 16 7 C 0.20 0.09 0.95 -132.15 -0.13 -0.03 16 8 C -0.07 -0.15 4.88 -104.62 -0.51 -0.66 16 9 C -0.10 -0.27 8.64 -39.58 -0.34 -0.61 16 10 C -0.12 -0.28 10.05 -39.58 -0.40 -0.68 16 11 C -0.12 -0.22 10.05 -39.59 -0.40 -0.62 16 12 C -0.12 -0.19 10.05 -39.58 -0.40 -0.59 16 13 C -0.11 -0.19 8.45 -39.58 -0.33 -0.53 16 14 C -0.15 -0.17 6.68 -25.91 -0.17 -0.34 16 15 C 0.07 0.00 5.58 -25.92 -0.14 -0.14 16 16 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 17 F -0.20 -0.56 17.41 2.25 0.04 -0.52 16 18 C -0.15 0.16 7.16 -25.92 -0.19 -0.03 16 19 C -0.13 0.05 10.44 -37.50 -0.39 -0.34 16 20 C -0.03 0.04 6.11 -81.87 -0.50 -0.46 16 21 C -0.03 0.07 2.98 36.01 0.11 0.18 16 22 O -0.53 0.85 12.87 -35.23 -0.45 0.40 16 23 Si 0.67 -2.09 30.95 -169.99 -5.26 -7.35 16 24 N -0.54 1.02 5.41 -5.42 -0.03 0.99 16 25 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 27 H 0.10 0.15 6.47 -51.93 -0.34 -0.19 16 28 H 0.40 -0.94 7.80 -40.82 -0.32 -1.26 16 29 H 0.12 0.31 6.22 -52.49 -0.33 -0.02 16 30 H 0.12 0.10 8.06 -52.48 -0.42 -0.32 16 31 H 0.12 0.01 8.06 -52.48 -0.42 -0.42 16 32 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 33 H 0.12 0.02 6.74 -52.49 -0.35 -0.33 16 34 H 0.09 0.23 7.22 -51.93 -0.37 -0.14 16 35 H 0.10 0.12 6.55 -51.93 -0.34 -0.22 16 36 H 0.11 -0.11 7.42 -51.93 -0.39 -0.49 16 37 H 0.09 -0.23 8.09 -51.93 -0.42 -0.65 16 38 H 0.15 -0.26 7.71 -52.49 -0.40 -0.66 16 39 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 40 H 0.38 -1.97 8.70 45.56 0.40 -1.58 16 41 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 42 H -0.25 0.24 7.11 56.52 0.40 0.64 16 43 H 0.41 -1.76 6.70 -40.82 -0.27 -2.03 16 LS Contribution 355.62 15.07 5.36 5.36 Total: 0.00 -8.07 355.62 -10.52 -18.60 By element: Atomic # 1 Polarization: -4.86 SS G_CDS: -5.28 Total: -10.14 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -4.75 Total: -4.75 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.25 Total: 0.89 kcal Atomic # 8 Polarization: -1.71 SS G_CDS: -0.38 Total: -2.10 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: -5.26 Total: -7.35 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -8.07 -10.52 -18.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.311 kcal (2) G-P(sol) polarization free energy of solvation -8.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds