Wall clock time and date at job start Sat Mar 6 2021 20:42:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36766 * 125.80323 * 2 1 4 4 C 1.47267 * 126.94191 * 359.97438 * 3 2 1 5 5 O 1.21630 * 119.99650 * 359.71990 * 4 3 2 6 6 N 1.34774 * 119.99899 * 179.71077 * 4 3 2 7 7 C 1.46506 * 120.00022 * 185.14302 * 6 4 3 8 8 C 1.50705 * 112.84843 * 65.78301 * 7 6 4 9 9 C 1.38233 * 119.99753 * 7.03785 * 8 7 6 10 10 C 1.38237 * 119.99455 * 180.27278 * 9 8 7 11 11 C 1.38231 * 120.00094 * 359.47054 * 10 9 8 12 12 C 1.38233 * 120.00181 * 0.25202 * 11 10 9 13 13 C 1.38230 * 119.99586 * 186.75577 * 8 7 6 14 14 C 1.53787 * 113.68994 * 294.52163 * 7 6 4 15 15 C 1.53783 * 87.07559 * 270.87282 * 14 7 6 16 16 H 1.08994 * 113.62225 * 89.12018 * 15 14 7 17 17 F 1.39911 * 113.68649 * 220.00793 * 15 14 7 18 18 C 1.53779 * 87.08460 * 334.56576 * 15 14 7 19 19 C 1.46682 * 106.11747 * 179.72105 * 3 2 1 20 20 C 1.34487 * 106.33140 * 0.23958 * 19 3 2 21 21 C 1.50700 * 125.57102 * 180.02562 * 20 19 3 22 22 O 1.42904 * 109.46699 * 299.99221 * 21 20 19 23 23 Si 1.86308 * 109.47057 * 179.97438 * 21 20 19 24 24 N 1.34653 * 125.80107 * 180.12796 * 2 1 3 25 25 H 1.08995 * 109.46780 * 90.00154 * 1 2 3 26 26 H 1.08993 * 109.46972 * 210.00832 * 1 2 3 27 27 H 1.09003 * 109.46610 * 330.00453 * 1 2 3 28 28 H 0.96999 * 120.00489 * 5.14752 * 6 4 3 29 29 H 1.08002 * 120.00273 * 0.02562 * 9 8 7 30 30 H 1.08003 * 120.00063 * 179.73984 * 10 9 8 31 31 H 1.08004 * 120.00079 * 180.27715 * 11 10 9 32 32 H 1.07997 * 120.00063 * 180.02562 * 12 11 10 33 33 H 1.07999 * 120.00876 * 0.02562 * 13 8 7 34 34 H 1.08997 * 113.61278 * 25.41263 * 14 7 6 35 35 H 1.08991 * 113.61317 * 156.32266 * 14 7 6 36 36 H 1.08997 * 113.61499 * 270.88852 * 18 15 14 37 37 H 1.08995 * 113.61534 * 139.98332 * 18 15 14 38 38 H 1.08001 * 126.83433 * 180.21573 * 19 3 2 39 39 H 1.08995 * 109.47325 * 59.99457 * 21 20 19 40 40 H 0.96694 * 114.00173 * 299.99641 * 22 21 20 41 41 H 1.48493 * 109.99850 * 179.97438 * 23 21 20 42 42 H 1.48493 * 109.99705 * 301.31588 * 23 21 20 43 43 H 0.97006 * 124.85272 * 0.06602 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0062 6 7 2.7851 3.5053 0.0054 7 6 2.3537 4.9009 0.1187 8 6 1.7149 5.2099 1.4482 9 6 1.7206 4.2623 2.4546 10 6 1.1297 4.5437 3.6722 11 6 0.5428 5.7766 3.8871 12 6 0.5421 6.7263 2.8826 13 6 1.1285 6.4430 1.6632 14 6 1.5366 5.3948 -1.0869 15 6 2.8742 5.8045 -1.7256 16 1 3.3370 5.0134 -2.3154 17 9 2.8223 7.0276 -2.4030 18 6 3.4326 5.9148 -0.2970 19 6 3.6882 0.6151 0.0069 20 6 3.6096 -0.7275 0.0050 21 6 4.7819 -1.6743 0.0108 22 8 5.5824 -1.4483 -1.1513 23 14 4.1614 -3.4310 0.0061 24 7 2.2947 -1.0921 -0.0024 25 1 -0.3633 0.0000 -1.0276 26 1 -0.3633 -0.8899 0.5139 27 1 -0.3633 0.8901 0.5138 28 1 3.7291 3.2938 -0.0653 29 1 2.1832 3.3006 2.2882 30 1 1.1305 3.8018 4.4571 31 1 0.0851 5.9981 4.8399 32 1 0.0839 7.6897 3.0506 33 1 1.1276 7.1849 0.8783 34 1 1.0233 4.5965 -1.6230 35 1 0.8859 6.2384 -0.8572 36 1 3.3001 6.9007 0.1487 37 1 4.4497 5.5365 -0.1953 38 1 4.5890 1.2109 0.0120 39 1 5.3823 -1.5038 0.9043 40 1 5.1116 -1.5822 -1.9852 41 1 5.3080 -4.3746 0.0111 42 1 3.3019 -3.6691 1.1933 43 1 1.9734 -2.0074 -0.0054 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:42:27 Heat of formation + Delta-G solvation = -7.442346 kcal Electronic energy + Delta-G solvation = -28730.407584 eV Core-core repulsion = 24658.334121 eV Total energy + Delta-G solvation = -4072.073463 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.60617 -42.54862 -41.67142 -39.52334 -38.45117 -37.70150 -34.36618 -32.79322 -32.21457 -31.81375 -31.55394 -28.91747 -27.10949 -26.39528 -25.29407 -23.78951 -23.32958 -22.44265 -21.58201 -20.73036 -20.22845 -18.68092 -18.51076 -17.70970 -17.31085 -17.12852 -16.74166 -16.62632 -16.44592 -15.97124 -15.79580 -15.66872 -15.45649 -15.15064 -14.87113 -14.57640 -14.49776 -14.27473 -14.06790 -13.99119 -13.88379 -13.83712 -13.50169 -13.37118 -13.25622 -12.68762 -12.56776 -12.55690 -12.29845 -12.25007 -11.94951 -11.65060 -11.42648 -10.89738 -10.48610 -10.21586 -9.86431 -9.84724 -9.60484 -9.15709 -5.14671 0.37564 0.46950 0.70191 1.12859 1.27283 1.49147 1.82429 1.97026 2.29393 2.51743 2.74491 3.20248 3.25698 3.43534 3.45155 3.60123 3.71425 3.82162 3.86207 3.96150 4.06509 4.11177 4.21976 4.22419 4.26558 4.45354 4.50763 4.53161 4.58811 4.60149 4.68515 4.72015 4.73479 4.77354 4.87395 5.02370 5.03131 5.05613 5.14917 5.25565 5.42284 5.53352 5.59515 5.68879 5.73829 5.85863 6.06625 6.41303 6.61513 6.72442 7.35132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.120 3.880 3 C -0.263 4.263 4 C 0.594 3.406 5 O -0.565 6.565 6 N -0.701 5.701 7 C 0.199 3.801 8 C -0.079 4.079 9 C -0.112 4.112 10 C -0.133 4.133 11 C -0.130 4.130 12 C -0.125 4.125 13 C -0.122 4.122 14 C -0.156 4.156 15 C 0.067 3.933 16 H 0.126 0.874 17 F -0.219 7.219 18 C -0.142 4.142 19 C -0.137 4.137 20 C -0.024 4.024 21 C -0.036 4.036 22 O -0.548 6.548 23 Si 0.761 3.239 24 N -0.535 5.535 25 H 0.087 0.913 26 H 0.086 0.914 27 H 0.080 0.920 28 H 0.415 0.585 29 H 0.112 0.888 30 H 0.129 0.871 31 H 0.137 0.863 32 H 0.141 0.859 33 H 0.135 0.865 34 H 0.075 0.925 35 H 0.101 0.899 36 H 0.113 0.887 37 H 0.111 0.889 38 H 0.157 0.843 39 H 0.122 0.878 40 H 0.396 0.604 41 H -0.291 1.291 42 H -0.277 1.277 43 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.392 -4.215 -0.832 4.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.000 4.000 3 C -0.273 4.273 4 C 0.385 3.615 5 O -0.445 6.445 6 N -0.354 5.354 7 C 0.111 3.889 8 C -0.080 4.080 9 C -0.131 4.131 10 C -0.151 4.151 11 C -0.148 4.148 12 C -0.143 4.143 13 C -0.140 4.140 14 C -0.195 4.195 15 C 0.031 3.969 16 H 0.144 0.856 17 F -0.199 7.199 18 C -0.179 4.179 19 C -0.161 4.161 20 C -0.132 4.132 21 C -0.148 4.148 22 O -0.355 6.355 23 Si 0.666 3.334 24 N -0.135 5.135 25 H 0.105 0.895 26 H 0.105 0.895 27 H 0.099 0.901 28 H 0.253 0.747 29 H 0.130 0.870 30 H 0.147 0.853 31 H 0.155 0.845 32 H 0.159 0.841 33 H 0.152 0.848 34 H 0.094 0.906 35 H 0.119 0.881 36 H 0.131 0.869 37 H 0.129 0.871 38 H 0.175 0.825 39 H 0.139 0.861 40 H 0.247 0.753 41 H -0.218 1.218 42 H -0.204 1.204 43 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 1.010 -4.794 0.002 4.899 hybrid contribution 0.425 -0.027 0.419 0.597 sum 1.435 -4.821 0.421 5.048 Atomic orbital electron populations 1.20606 0.86224 1.04399 1.04163 1.20523 0.94173 0.85627 0.99669 1.20137 0.94066 0.91554 1.21534 1.17494 0.85006 0.84522 0.74521 1.90772 1.17736 1.84673 1.51298 1.45345 1.10557 1.03761 1.75705 1.19554 0.96075 0.81964 0.91282 1.19769 0.99181 0.94503 0.94531 1.20995 0.99714 0.98850 0.93494 1.21361 0.98517 0.97707 0.97473 1.21440 0.99564 0.93688 1.00111 1.21416 0.99347 1.00302 0.93253 1.21131 0.98393 0.96409 0.98068 1.24002 0.97144 1.02178 0.96141 1.23273 0.98341 0.83061 0.92190 0.85645 1.92797 1.97219 1.47302 1.82610 1.23971 0.99796 1.00188 0.93983 1.21956 0.95387 0.93170 1.05579 1.20678 0.84667 0.95676 1.12182 1.24536 0.91209 1.07040 0.91978 1.86515 1.39658 1.93057 1.16250 0.94332 0.80991 0.72460 0.85635 1.41690 1.05217 1.08776 1.57834 0.89475 0.89476 0.90145 0.74697 0.86977 0.85344 0.84509 0.84134 0.84760 0.90599 0.88074 0.86866 0.87062 0.82510 0.86077 0.75339 1.21806 1.20378 0.73303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.88 71.24 0.70 0.79 16 2 C 0.12 0.05 7.17 41.78 0.30 0.35 16 3 C -0.26 -0.67 6.29 -19.04 -0.12 -0.79 16 4 C 0.59 3.15 5.77 86.62 0.50 3.65 16 5 O -0.56 -6.62 13.06 -4.13 -0.05 -6.68 16 6 N -0.70 -0.19 4.43 -427.27 -1.89 -2.08 16 7 C 0.20 0.30 0.95 3.39 0.00 0.30 16 8 C -0.08 -0.40 4.88 -19.87 -0.10 -0.50 16 9 C -0.11 -0.76 8.64 22.27 0.19 -0.57 16 10 C -0.13 -0.75 10.05 22.27 0.22 -0.53 16 11 C -0.13 -0.53 10.05 22.27 0.22 -0.31 16 12 C -0.13 -0.44 10.05 22.27 0.22 -0.22 16 13 C -0.12 -0.49 8.45 22.27 0.19 -0.30 16 14 C -0.16 -0.51 6.68 31.12 0.21 -0.30 16 15 C 0.07 0.01 5.58 31.12 0.17 0.18 16 16 H 0.13 -0.39 8.14 -2.39 -0.02 -0.41 16 17 F -0.22 -1.22 17.41 44.97 0.78 -0.43 16 18 C -0.14 0.36 7.16 31.12 0.22 0.58 16 19 C -0.14 0.14 10.44 23.62 0.25 0.39 16 20 C -0.02 0.08 6.11 40.98 0.25 0.33 16 21 C -0.04 0.18 2.98 71.24 0.21 0.39 16 22 O -0.55 2.25 12.87 -148.98 -1.92 0.33 16 23 Si 0.76 -5.14 30.95 68.60 2.12 -3.01 16 24 N -0.53 2.31 5.41 -171.07 -0.93 1.39 16 25 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 27 H 0.08 0.38 6.47 -2.39 -0.02 0.37 16 28 H 0.42 -1.97 7.80 -92.71 -0.72 -2.70 16 29 H 0.11 0.77 6.22 -2.91 -0.02 0.75 16 30 H 0.13 0.35 8.06 -2.91 -0.02 0.32 16 31 H 0.14 0.01 8.06 -2.91 -0.02 -0.02 16 32 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 33 H 0.13 0.11 6.74 -2.91 -0.02 0.09 16 34 H 0.08 0.52 7.22 -2.39 -0.02 0.51 16 35 H 0.10 0.36 6.55 -2.39 -0.02 0.35 16 36 H 0.11 -0.27 7.42 -2.39 -0.02 -0.29 16 37 H 0.11 -0.75 8.09 -2.39 -0.02 -0.77 16 38 H 0.16 -0.63 7.71 -2.91 -0.02 -0.65 16 39 H 0.12 -0.51 7.96 -2.39 -0.02 -0.53 16 40 H 0.40 -4.59 8.70 -74.06 -0.64 -5.23 16 41 H -0.29 -0.42 7.11 99.48 0.71 0.29 16 42 H -0.28 0.69 7.11 99.48 0.71 1.40 16 43 H 0.43 -4.07 6.70 -92.70 -0.62 -4.69 16 Total: 0.00 -19.98 355.62 0.90 -19.08 By element: Atomic # 1 Polarization: -11.16 SS G_CDS: -0.87 Total: -12.03 kcal Atomic # 6 Polarization: -0.22 SS G_CDS: 3.65 Total: 3.43 kcal Atomic # 7 Polarization: 2.13 SS G_CDS: -2.82 Total: -0.69 kcal Atomic # 8 Polarization: -4.38 SS G_CDS: -1.97 Total: -6.35 kcal Atomic # 9 Polarization: -1.22 SS G_CDS: 0.78 Total: -0.43 kcal Atomic # 14 Polarization: -5.14 SS G_CDS: 2.12 Total: -3.01 kcal Total: -19.98 0.90 -19.08 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.638 kcal (2) G-P(sol) polarization free energy of solvation -19.984 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.903 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds