Wall clock time and date at job start Sat Mar 6 2021 20:46:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42894 * 114.00325 * 2 1 4 4 C 1.53000 * 109.47143 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.90773 * 43.74690 * 4 3 2 6 6 C 1.53782 * 113.61671 * 175.00404 * 4 3 2 7 7 C 1.53775 * 87.17457 * 140.01818 * 6 4 3 8 8 H 1.09007 * 113.61210 * 89.16043 * 7 6 4 9 9 N 1.46497 * 113.61634 * 219.97556 * 7 6 4 10 10 C 1.34782 * 120.00125 * 205.00304 * 9 7 6 11 11 O 1.21279 * 119.99910 * 0.02562 * 10 9 7 12 12 C 1.50700 * 119.99954 * 179.97438 * 10 9 7 13 13 C 1.53003 * 109.47272 * 295.00160 * 12 10 9 14 14 O 1.42899 * 109.47252 * 174.99906 * 12 10 9 15 15 C 1.35898 * 117.00348 * 204.95040 * 14 12 10 16 16 C 1.38721 * 120.05727 * 174.27557 * 15 14 12 17 17 C 1.38150 * 119.94569 * 179.74628 * 16 15 14 18 18 C 1.38272 * 120.05165 * 0.50295 * 17 16 15 19 19 C 1.50698 * 119.94260 * 179.74410 * 18 17 16 20 20 O 1.42902 * 109.47054 * 120.02360 * 19 18 17 21 21 Si 1.86298 * 109.47141 * 0.03033 * 19 18 17 22 22 C 1.38264 * 120.11058 * 359.77252 * 18 17 16 23 23 C 1.38140 * 120.05783 * 359.97303 * 22 18 17 24 24 C 1.53780 * 87.08395 * 334.52559 * 7 6 4 25 25 H 1.08994 * 109.47466 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.46514 * 299.99931 * 1 2 3 27 27 H 1.08997 * 109.47267 * 59.98995 * 1 2 3 28 28 H 1.08997 * 109.47040 * 60.00440 * 3 2 1 29 29 H 1.08999 * 109.47300 * 300.00478 * 3 2 1 30 30 H 1.09005 * 113.61366 * 25.42924 * 6 4 3 31 31 H 1.09002 * 113.61241 * 254.61636 * 6 4 3 32 32 H 0.97006 * 119.99794 * 24.99756 * 9 7 6 33 33 H 1.09001 * 109.47460 * 54.99654 * 12 10 9 34 34 H 1.09009 * 109.46769 * 300.00231 * 13 12 10 35 35 H 1.08998 * 109.47380 * 59.99659 * 13 12 10 36 36 H 1.09000 * 109.47472 * 180.02562 * 13 12 10 37 37 H 1.07999 * 120.03224 * 359.97438 * 16 15 14 38 38 H 1.07992 * 119.97615 * 180.27653 * 17 16 15 39 39 H 1.08995 * 109.47471 * 240.02344 * 19 18 17 40 40 H 0.96696 * 114.00253 * 180.02562 * 20 19 18 41 41 H 1.48503 * 110.00033 * 298.67690 * 21 19 18 42 42 H 1.48497 * 110.00456 * 59.99664 * 21 19 18 43 43 H 1.08002 * 119.96733 * 179.97438 * 22 18 17 44 44 H 1.07997 * 120.03156 * 179.97438 * 23 22 18 45 45 H 1.09003 * 113.61489 * 139.97660 * 24 7 6 46 46 H 1.09000 * 113.60955 * 270.88397 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 -0.0006 5 1 3.9009 0.4280 -0.6952 6 6 4.2605 2.5351 -0.1234 7 6 5.2698 2.0006 0.9063 8 1 6.1093 1.4682 0.4591 9 7 5.6900 3.0013 1.8903 10 6 6.8804 2.8783 2.5103 11 8 7.6039 1.9395 2.2533 12 6 7.3129 3.9081 3.5221 13 6 7.5055 5.2571 2.8265 14 8 8.5451 3.5002 4.1200 15 6 8.8179 3.9820 5.3611 16 6 9.9364 3.5352 6.0494 17 6 10.2144 4.0304 7.3088 18 6 9.3732 4.9628 7.8875 19 6 9.6757 5.4970 9.2637 20 8 9.8494 6.9139 9.1972 21 14 11.2371 4.7096 9.9062 22 6 8.2547 5.4054 7.2058 23 6 7.9752 4.9173 5.9441 24 6 4.1485 1.0758 1.4085 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3632 0.5139 0.8901 27 1 -0.3634 0.5140 -0.8899 28 1 1.6888 1.8463 0.8900 29 1 1.6886 1.8464 -0.8899 30 1 3.6741 3.3799 0.2379 31 1 4.6930 2.7106 -1.1085 32 1 5.1115 3.7524 2.0955 33 1 6.5487 4.0030 4.2935 34 1 8.2698 5.1623 2.0550 35 1 6.5657 5.5682 2.3704 36 1 7.8188 6.0018 3.5582 37 1 10.5913 2.8036 5.5997 38 1 11.0874 3.6863 7.8433 39 1 8.8486 5.2635 9.9341 40 1 10.0477 7.3263 10.0490 41 1 11.0587 3.2390 10.0103 42 1 12.3725 5.0206 9.0010 43 1 7.5990 6.1335 7.6601 44 1 7.1012 5.2629 5.4122 45 1 4.4903 0.0717 1.6598 46 1 3.5314 1.5217 2.1886 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:46:49 Heat of formation + Delta-G solvation = -90.439582 kcal Electronic energy + Delta-G solvation = -26593.205715 eV Core-core repulsion = 22644.189527 eV Total energy + Delta-G solvation = -3949.016188 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.83112 -41.02584 -39.88923 -38.88692 -38.16298 -37.21458 -34.91061 -33.15585 -32.12690 -31.48522 -29.69668 -27.12524 -26.82619 -26.62536 -25.57761 -24.31811 -23.28618 -22.16460 -21.52951 -20.67763 -19.49197 -18.59578 -18.30893 -17.73411 -17.30074 -16.92785 -16.84836 -16.78945 -16.73472 -16.09339 -16.05323 -15.81020 -15.40388 -15.27112 -14.90936 -14.54188 -14.38207 -14.11241 -13.88462 -13.83782 -13.63362 -13.51181 -13.41445 -13.28904 -13.08851 -12.94972 -12.48683 -12.35950 -12.16074 -12.13736 -11.87345 -11.83275 -11.77821 -11.48257 -10.78911 -10.65247 -10.32796 -10.13974 -10.05782 -9.17767 -4.97251 0.22112 0.34177 1.29196 1.45490 1.47847 1.64610 1.98461 2.43433 2.62060 2.71451 3.30484 3.39749 3.41089 3.47002 3.55478 3.65331 3.75201 3.77902 3.79275 3.79898 3.90679 4.19241 4.20785 4.22118 4.25605 4.32519 4.35245 4.41671 4.44953 4.46681 4.52652 4.56862 4.57668 4.63112 4.71189 4.73321 4.88637 4.90704 4.96450 4.98225 5.15605 5.16057 5.28134 5.43163 5.47354 5.63349 6.14530 6.22867 6.37945 6.61380 7.08062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.073 3.927 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.137 4.137 7 C 0.124 3.876 8 H 0.120 0.880 9 N -0.716 5.716 10 C 0.520 3.480 11 O -0.511 6.511 12 C 0.066 3.934 13 C -0.177 4.177 14 O -0.283 6.283 15 C 0.135 3.865 16 C -0.140 4.140 17 C -0.082 4.082 18 C -0.113 4.113 19 C -0.066 4.066 20 O -0.547 6.547 21 Si 0.680 3.320 22 C -0.047 4.047 23 C -0.210 4.210 24 C -0.144 4.144 25 H 0.087 0.913 26 H 0.041 0.959 27 H 0.042 0.958 28 H 0.050 0.950 29 H 0.052 0.948 30 H 0.089 0.911 31 H 0.082 0.918 32 H 0.402 0.598 33 H 0.100 0.900 34 H 0.077 0.923 35 H 0.080 0.920 36 H 0.079 0.921 37 H 0.137 0.863 38 H 0.125 0.875 39 H 0.073 0.927 40 H 0.382 0.618 41 H -0.254 1.254 42 H -0.250 1.250 43 H 0.132 0.868 44 H 0.133 0.867 45 H 0.077 0.923 46 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.139 4.900 2.625 7.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.175 4.175 7 C 0.019 3.981 8 H 0.137 0.863 9 N -0.369 5.369 10 C 0.304 3.696 11 O -0.384 6.384 12 C 0.005 3.995 13 C -0.235 4.235 14 O -0.195 6.195 15 C 0.090 3.910 16 C -0.159 4.159 17 C -0.100 4.100 18 C -0.114 4.114 19 C -0.177 4.177 20 O -0.353 6.353 21 Si 0.581 3.419 22 C -0.065 4.065 23 C -0.229 4.229 24 C -0.183 4.183 25 H 0.106 0.894 26 H 0.060 0.940 27 H 0.060 0.940 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.107 0.893 31 H 0.100 0.900 32 H 0.236 0.764 33 H 0.118 0.882 34 H 0.096 0.904 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.155 0.845 38 H 0.142 0.858 39 H 0.091 0.909 40 H 0.229 0.771 41 H -0.179 1.179 42 H -0.175 1.175 43 H 0.149 0.851 44 H 0.151 0.849 45 H 0.096 0.904 46 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -3.822 3.222 1.517 5.224 hybrid contribution -1.231 0.734 -0.218 1.450 sum -5.053 3.956 1.299 6.547 Atomic orbital electron populations 1.22766 0.80759 1.03063 1.00011 1.87901 1.19866 1.27755 1.95399 1.22502 0.92737 0.84966 1.00211 1.22381 0.93171 0.98361 0.98670 0.87659 1.23364 0.96961 0.97155 1.00054 1.22558 0.96415 0.89979 0.89138 0.86257 1.45848 1.19367 1.28729 1.42989 1.20114 0.81524 0.86137 0.81803 1.90775 1.52706 1.32212 1.62710 1.22217 0.87417 0.94267 0.95552 1.22356 1.04103 0.94630 1.02386 1.86223 1.37275 1.68159 1.27887 1.19026 0.94715 0.93131 0.84140 1.20341 0.97770 1.03252 0.94501 1.20686 0.98013 0.96727 0.94550 1.19261 0.96788 0.99347 0.95964 1.24596 1.09684 0.86666 0.96704 1.86486 1.94259 1.18357 1.36207 0.95416 0.77673 0.80378 0.88435 1.20770 0.95756 0.96929 0.93055 1.21326 1.01953 1.01547 0.98035 1.23590 0.97024 1.01001 0.96678 0.89416 0.94045 0.93967 0.93166 0.93002 0.89270 0.89961 0.76364 0.88239 0.90390 0.90154 0.90238 0.84480 0.85798 0.90871 0.77069 1.17943 1.17477 0.85058 0.84887 0.90421 0.89598 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.70 10.70 -35.23 -0.38 -1.08 16 3 C 0.07 -0.05 5.78 37.16 0.21 0.16 16 4 C -0.11 0.12 4.02 -89.66 -0.36 -0.24 16 5 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 6 C -0.14 0.36 7.38 -25.92 -0.19 0.17 16 7 C 0.12 -0.08 4.24 -67.12 -0.28 -0.36 16 8 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 9 N -0.72 0.87 5.32 -53.02 -0.28 0.59 16 10 C 0.52 1.17 7.18 -10.98 -0.08 1.09 16 11 O -0.51 -3.66 16.11 -14.30 -0.23 -3.89 16 12 C 0.07 0.03 2.64 -27.88 -0.07 -0.04 16 13 C -0.18 0.29 9.13 37.16 0.34 0.63 16 14 O -0.28 -1.15 9.34 -39.28 -0.37 -1.52 16 15 C 0.14 0.45 6.60 -39.22 -0.26 0.20 16 16 C -0.14 -0.51 9.99 -39.44 -0.39 -0.90 16 17 C -0.08 -0.27 8.66 -39.60 -0.34 -0.61 16 18 C -0.11 -0.30 5.42 -104.60 -0.57 -0.86 16 19 C -0.07 -0.01 2.81 36.00 0.10 0.09 16 20 O -0.55 -0.12 12.74 -35.23 -0.45 -0.57 16 21 Si 0.68 -0.45 29.78 -169.99 -5.06 -5.51 16 22 C -0.05 -0.09 9.60 -39.61 -0.38 -0.47 16 23 C -0.21 -0.31 8.24 -39.43 -0.33 -0.63 16 24 C -0.14 0.07 7.44 -25.77 -0.19 -0.12 16 25 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.05 -0.08 7.85 -51.93 -0.41 -0.49 16 29 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.40 -1.78 8.51 -40.82 -0.35 -2.12 16 33 H 0.10 -0.19 6.31 -51.93 -0.33 -0.51 16 34 H 0.08 -0.01 8.14 -51.92 -0.42 -0.44 16 35 H 0.08 -0.35 7.93 -51.93 -0.41 -0.76 16 36 H 0.08 -0.13 6.91 -51.93 -0.36 -0.49 16 37 H 0.14 0.39 8.06 -52.49 -0.42 -0.03 16 38 H 0.12 0.31 4.87 -52.49 -0.26 0.05 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 40 H 0.38 -1.83 8.74 45.56 0.40 -1.43 16 41 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 42 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 43 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 44 H 0.13 -0.17 5.43 -52.49 -0.28 -0.46 16 45 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 46 H 0.09 -0.10 7.91 -51.93 -0.41 -0.51 16 LS Contribution 377.57 15.07 5.69 5.69 Total: 0.00 -10.22 377.57 -9.81 -20.03 By element: Atomic # 1 Polarization: -5.87 SS G_CDS: -7.05 Total: -12.93 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -1.68 Total: -0.81 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.28 Total: 0.59 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.42 Total: -7.06 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.06 Total: -5.51 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -10.22 -9.81 -20.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.406 kcal (2) G-P(sol) polarization free energy of solvation -10.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.812 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.440 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds