Wall clock time and date at job start Sat Mar 6 2021 20:46:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42901 * 114.00267 * 2 1 4 4 C 1.52996 * 109.47127 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.85169 * 314.66668 * 4 3 2 6 6 C 1.53782 * 113.61578 * 85.86323 * 4 3 2 7 7 C 1.53958 * 87.01835 * 139.95206 * 6 4 3 8 8 H 1.09001 * 113.53815 * 89.18604 * 7 6 4 9 9 N 1.46503 * 113.74063 * 220.05634 * 7 6 4 10 10 C 1.34778 * 119.99885 * 252.59535 * 9 7 6 11 11 O 1.21720 * 119.99765 * 0.02562 * 10 9 7 12 12 C 1.46563 * 119.99720 * 179.97438 * 10 9 7 13 13 C 1.40861 * 126.57705 * 179.97438 * 12 10 9 14 14 C 1.40089 * 132.86462 * 0.02562 * 13 12 10 15 15 C 1.36448 * 119.25502 * 179.97438 * 14 13 12 16 16 C 1.50696 * 120.29840 * 179.97438 * 15 14 13 17 17 O 1.42891 * 109.47325 * 239.99874 * 16 15 14 18 18 Si 1.86298 * 109.47024 * 120.00001 * 16 15 14 19 19 C 1.40161 * 119.40760 * 359.97438 * 15 14 13 20 20 C 1.35186 * 120.32081 * 359.97438 * 19 15 14 21 21 N 1.36242 * 120.70549 * 0.03653 * 20 19 15 22 22 N 1.40019 * 132.01765 * 180.02562 * 21 20 19 23 23 C 1.30739 * 109.60521 * 179.68653 * 22 21 20 24 24 C 1.53777 * 87.11068 * 334.63766 * 7 6 4 25 25 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46938 * 59.99878 * 1 2 3 27 27 H 1.09004 * 109.46926 * 299.99999 * 1 2 3 28 28 H 1.09001 * 109.46707 * 299.99906 * 3 2 1 29 29 H 1.08999 * 109.46695 * 60.00012 * 3 2 1 30 30 H 1.09001 * 113.61200 * 254.52661 * 6 4 3 31 31 H 1.08992 * 113.61361 * 25.42976 * 6 4 3 32 32 H 0.96999 * 119.99973 * 72.59687 * 9 7 6 33 33 H 1.08001 * 120.37171 * 359.94580 * 14 13 12 34 34 H 1.08998 * 109.46876 * 0.02562 * 16 15 14 35 35 H 0.96704 * 114.00579 * 300.00341 * 17 16 15 36 36 H 1.48500 * 110.00341 * 58.68080 * 18 16 15 37 37 H 1.48504 * 110.00005 * 180.02562 * 18 16 15 38 38 H 1.08004 * 119.84040 * 179.97438 * 19 15 14 39 39 H 1.07998 * 119.65276 * 179.97438 * 20 19 15 40 40 H 1.08001 * 125.62379 * 180.24096 * 23 22 21 41 41 H 1.09001 * 113.61792 * 270.81436 * 24 7 6 42 42 H 1.08999 * 113.61735 * 139.91392 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.9020 0.4471 0.7134 6 6 4.1410 1.0348 -1.4063 7 6 5.2653 1.9749 -0.9345 8 1 6.1056 1.4530 -0.4766 9 7 5.6833 2.9487 -1.9461 10 6 6.8711 2.8075 -2.5671 11 8 7.5963 1.8707 -2.2878 12 6 7.2889 3.7814 -3.5795 13 6 8.4934 3.7687 -4.3098 14 6 9.5951 2.9034 -4.3159 15 6 10.6391 3.1590 -5.1564 16 6 11.8362 2.2440 -5.1819 17 8 13.0086 2.9836 -4.8349 18 14 12.0357 1.5300 -6.8910 19 6 10.5883 4.2803 -5.9958 20 6 9.5144 5.1012 -5.9737 21 7 8.4672 4.8545 -5.1379 22 7 7.2604 5.5310 -4.9225 23 6 6.5615 4.9029 -4.0136 24 6 4.2607 2.5379 0.0846 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5139 0.8900 28 1 1.6887 1.8463 -0.8900 29 1 1.6887 1.8463 0.8900 30 1 4.4811 0.0236 -1.6297 31 1 3.5207 1.4581 -2.1962 32 1 5.1052 3.6950 -2.1688 33 1 9.6179 2.0438 -3.6624 34 1 11.6909 1.4356 -4.4654 35 1 13.1998 3.7204 -5.4314 36 1 12.2025 2.6232 -7.8820 37 1 13.2127 0.6252 -6.9292 38 1 11.4110 4.4895 -6.6635 39 1 9.4867 5.9624 -6.6248 40 1 5.5875 5.1991 -3.6529 41 1 3.6732 3.3729 -0.2970 42 1 4.6973 2.7385 1.0630 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:46:59 Heat of formation + Delta-G solvation = 20.945568 kcal Electronic energy + Delta-G solvation = -25790.614722 eV Core-core repulsion = 21933.344265 eV Total energy + Delta-G solvation = -3857.270458 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.30147 -40.99029 -39.64657 -39.20502 -38.08337 -37.34049 -34.47954 -34.14725 -32.11518 -30.58156 -29.45333 -27.40038 -26.89564 -26.59094 -25.15963 -24.19087 -23.18482 -22.57152 -21.30341 -20.56122 -19.02260 -18.64704 -18.05058 -17.60084 -17.40527 -17.06764 -16.95459 -16.79147 -16.53642 -16.02366 -15.82939 -15.69673 -15.51007 -15.37604 -14.85680 -14.65778 -14.27043 -13.94438 -13.84839 -13.54186 -13.50447 -13.26984 -13.17109 -12.96954 -12.48205 -12.37667 -12.12481 -12.02001 -11.90585 -11.66943 -11.54618 -11.36143 -10.91371 -10.70882 -10.57941 -10.37197 -9.91515 -8.76701 -5.05600 -0.56213 -0.16605 0.98670 1.07190 1.11665 1.47825 1.80418 2.05799 2.29007 2.60329 2.79407 3.05460 3.14070 3.27228 3.41383 3.48983 3.60857 3.62345 3.84162 3.85014 3.91266 3.98281 4.11524 4.24022 4.27687 4.34365 4.35825 4.42389 4.49997 4.53631 4.54201 4.66234 4.70734 4.75040 4.78615 4.86724 5.04426 5.07319 5.10764 5.15700 5.24864 5.35047 5.62843 5.66281 6.21446 6.21533 6.30516 6.65396 7.43126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.104 0.896 6 C -0.143 4.143 7 C 0.127 3.873 8 H 0.118 0.882 9 N -0.719 5.719 10 C 0.602 3.398 11 O -0.548 6.548 12 C -0.315 4.315 13 C 0.169 3.831 14 C -0.089 4.089 15 C -0.066 4.066 16 C -0.076 4.076 17 O -0.521 6.521 18 Si 0.696 3.304 19 C -0.162 4.162 20 C 0.123 3.877 21 N -0.267 5.267 22 N -0.314 5.314 23 C 0.120 3.880 24 C -0.138 4.138 25 H 0.087 0.913 26 H 0.041 0.959 27 H 0.041 0.959 28 H 0.050 0.950 29 H 0.051 0.949 30 H 0.076 0.924 31 H 0.084 0.916 32 H 0.398 0.602 33 H 0.166 0.834 34 H 0.127 0.873 35 H 0.375 0.625 36 H -0.253 1.253 37 H -0.247 1.247 38 H 0.156 0.844 39 H 0.177 0.823 40 H 0.198 0.802 41 H 0.088 0.912 42 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.811 2.052 -2.154 4.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.122 0.878 6 C -0.182 4.182 7 C 0.022 3.978 8 H 0.136 0.864 9 N -0.369 5.369 10 C 0.391 3.609 11 O -0.427 6.427 12 C -0.330 4.330 13 C 0.049 3.951 14 C -0.109 4.109 15 C -0.072 4.072 16 C -0.184 4.184 17 O -0.327 6.327 18 Si 0.594 3.406 19 C -0.183 4.183 20 C -0.003 4.003 21 N -0.031 5.031 22 N -0.134 5.134 23 C -0.061 4.061 24 C -0.177 4.177 25 H 0.105 0.895 26 H 0.059 0.941 27 H 0.060 0.940 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.095 0.905 31 H 0.103 0.897 32 H 0.232 0.768 33 H 0.183 0.817 34 H 0.144 0.856 35 H 0.223 0.777 36 H -0.177 1.177 37 H -0.171 1.171 38 H 0.174 0.826 39 H 0.194 0.806 40 H 0.215 0.785 41 H 0.106 0.894 42 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -1.726 1.798 -2.948 3.860 hybrid contribution -0.190 1.169 0.615 1.335 sum -1.916 2.967 -2.333 4.233 Atomic orbital electron populations 1.22761 0.80863 1.02991 0.99980 1.87900 1.19771 1.27831 1.95396 1.22517 0.92896 0.84884 1.00152 1.22336 0.93036 0.98334 0.98932 0.87816 1.23554 0.97200 1.00946 0.96505 1.22498 0.96248 0.90336 0.88704 0.86377 1.45673 1.19949 1.29799 1.41482 1.16856 0.80745 0.83638 0.79643 1.90783 1.53596 1.32939 1.65364 1.19644 0.97611 1.04658 1.11083 1.19302 0.95538 0.88722 0.91586 1.20704 0.90416 1.00186 0.99589 1.20414 0.96714 0.95566 0.94500 1.25077 0.82812 0.96471 1.14081 1.86707 1.43110 1.47544 1.55382 0.94389 0.88535 0.83949 0.73699 1.20705 0.98939 0.96020 1.02674 1.21512 0.84640 1.00873 0.93296 1.46077 1.13777 1.17763 1.25473 1.77639 0.91934 1.20026 1.23783 1.24060 0.98828 0.91355 0.91865 1.23364 0.97175 0.96959 1.00176 0.89478 0.94062 0.94026 0.93183 0.93109 0.90527 0.89706 0.76775 0.81703 0.85555 0.77721 1.17691 1.17119 0.82609 0.80583 0.78513 0.89385 0.90128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.78 10.70 -35.23 -0.38 -1.16 16 3 C 0.07 -0.03 5.76 37.16 0.21 0.19 16 4 C -0.11 0.08 4.00 -89.81 -0.36 -0.28 16 5 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 6 C -0.14 0.02 7.45 -25.82 -0.19 -0.17 16 7 C 0.13 -0.02 4.24 -67.03 -0.28 -0.30 16 8 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 9 N -0.72 0.16 5.35 -54.26 -0.29 -0.13 16 10 C 0.60 1.78 7.78 -12.90 -0.10 1.68 16 11 O -0.55 -3.37 15.30 5.17 0.08 -3.29 16 12 C -0.32 -0.74 6.17 -104.68 -0.65 -1.38 16 13 C 0.17 0.45 6.76 -84.07 -0.57 -0.11 16 14 C -0.09 -0.13 9.35 -39.53 -0.37 -0.50 16 15 C -0.07 0.04 4.53 -104.55 -0.47 -0.43 16 16 C -0.08 0.10 2.84 36.00 0.10 0.20 16 17 O -0.52 -0.01 12.87 -35.23 -0.45 -0.46 16 18 Si 0.70 -1.52 31.97 -169.99 -5.43 -6.95 16 19 C -0.16 0.33 8.38 -39.95 -0.33 0.00 16 20 C 0.12 -0.12 11.17 -16.68 -0.19 -0.31 16 21 N -0.27 -0.52 3.86 -10.54 -0.04 -0.56 16 22 N -0.31 -0.78 12.57 30.75 0.39 -0.39 16 23 C 0.12 0.06 11.44 -17.15 -0.20 -0.13 16 24 C -0.14 0.29 7.40 -25.92 -0.19 0.10 16 25 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 28 H 0.05 -0.06 7.87 -51.93 -0.41 -0.47 16 29 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 31 H 0.08 -0.05 7.92 -51.93 -0.41 -0.46 16 32 H 0.40 -1.22 7.65 -40.82 -0.31 -1.54 16 33 H 0.17 0.29 7.01 -52.49 -0.37 -0.08 16 34 H 0.13 -0.20 7.70 -51.93 -0.40 -0.60 16 35 H 0.37 -1.35 8.08 45.56 0.37 -0.98 16 36 H -0.25 0.29 7.05 56.52 0.40 0.69 16 37 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 38 H 0.16 -0.75 7.26 -52.48 -0.38 -1.14 16 39 H 0.18 -0.65 8.06 -52.49 -0.42 -1.08 16 40 H 0.20 -0.74 7.46 -52.49 -0.39 -1.14 16 41 H 0.09 -0.30 8.08 -51.93 -0.42 -0.72 16 42 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 356.62 15.07 5.37 5.37 Total: 0.00 -9.92 356.62 -8.92 -18.84 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -5.69 Total: -10.91 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -2.47 Total: -0.36 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: 0.06 Total: -1.08 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.75 Total: -4.91 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.43 Total: -6.95 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.92 -8.92 -18.84 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.787 kcal (2) G-P(sol) polarization free energy of solvation -9.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.924 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.841 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds