Wall clock time and date at job start Sat Mar 6 2021 20:47:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42903 * 113.99802 * 2 1 4 4 C 1.53006 * 109.47056 * 179.97438 * 3 2 1 5 5 H 1.09002 * 112.84845 * 43.80903 * 4 3 2 6 6 C 1.53784 * 113.61161 * 175.00179 * 4 3 2 7 7 C 1.53788 * 87.07838 * 139.98292 * 6 4 3 8 8 H 1.08997 * 113.60939 * 89.11435 * 7 6 4 9 9 N 1.46499 * 113.61073 * 220.01815 * 7 6 4 10 10 C 1.34776 * 119.99642 * 204.99879 * 9 7 6 11 11 O 1.21697 * 119.99984 * 0.02562 * 10 9 7 12 12 C 1.46676 * 120.00055 * 180.02562 * 10 9 7 13 13 C 1.37876 * 126.23422 * 179.71720 * 12 10 9 14 14 C 1.50698 * 126.45676 * 0.02562 * 13 12 10 15 15 C 1.39841 * 107.08355 * 179.85084 * 13 12 10 16 16 C 1.50700 * 126.06351 * 180.16284 * 15 13 12 17 17 O 1.42906 * 109.46889 * 306.87288 * 16 15 13 18 18 Si 1.86293 * 109.47476 * 66.87938 * 16 15 13 19 19 C 1.35449 * 107.86321 * 0.41127 * 15 13 12 20 20 C 1.50707 * 125.56134 * 179.71837 * 19 15 13 21 21 N 1.35538 * 108.87531 * 359.74832 * 19 15 13 22 22 C 1.53781 * 113.61347 * 272.50005 * 4 3 2 23 23 H 1.09002 * 109.46959 * 59.99846 * 1 2 3 24 24 H 1.08999 * 109.46816 * 179.97438 * 1 2 3 25 25 H 1.08994 * 109.47156 * 299.99210 * 1 2 3 26 26 H 1.08997 * 109.47456 * 299.99987 * 3 2 1 27 27 H 1.09000 * 109.46973 * 60.00603 * 3 2 1 28 28 H 1.09000 * 113.61447 * 254.53012 * 6 4 3 29 29 H 1.08997 * 113.61275 * 25.43992 * 6 4 3 30 30 H 0.97002 * 120.00422 * 25.00415 * 9 7 6 31 31 H 1.08995 * 109.47204 * 90.02322 * 14 13 12 32 32 H 1.08998 * 109.47053 * 210.02989 * 14 13 12 33 33 H 1.08999 * 109.47189 * 330.02377 * 14 13 12 34 34 H 1.09001 * 109.46431 * 186.88194 * 16 15 13 35 35 H 0.96697 * 113.99919 * 179.97438 * 17 16 15 36 36 H 1.48501 * 110.00030 * 302.97323 * 18 16 15 37 37 H 1.48497 * 110.00190 * 64.29035 * 18 16 15 38 38 H 1.08997 * 109.46929 * 268.72043 * 20 19 15 39 39 H 1.08996 * 109.46792 * 28.71774 * 20 19 15 40 40 H 1.08996 * 109.46660 * 148.71435 * 20 19 15 41 41 H 0.96998 * 125.67622 * 180.02562 * 21 19 15 42 42 H 1.08996 * 113.61465 * 334.56949 * 22 4 3 43 43 H 1.08996 * 113.61294 * 105.47455 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.9004 0.4286 -0.6944 6 6 4.2603 2.5354 -0.1221 7 6 5.2671 1.9996 0.9096 8 1 6.1065 1.4658 0.4639 9 7 5.6856 2.9994 1.8952 10 6 6.8745 2.8754 2.5178 11 8 7.6005 1.9331 2.2609 12 6 7.2933 3.8761 3.5050 13 6 8.4731 3.8729 4.2185 14 6 9.5704 2.8439 4.1299 15 6 8.4611 5.0067 5.0371 16 6 9.5488 5.4213 5.9942 17 8 9.8541 4.3330 6.8687 18 14 11.0740 5.8936 5.0344 19 6 7.2962 5.6630 4.8209 20 6 6.8686 6.9373 5.5024 21 7 6.5775 4.9862 3.8922 22 6 4.1441 1.0751 1.4086 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5137 0.8900 26 1 1.6886 1.8464 -0.8899 27 1 1.6886 1.8464 0.8900 28 1 4.6949 2.7099 -1.1064 29 1 3.6735 3.3802 0.2386 30 1 5.1071 3.7507 2.0997 31 1 10.2869 3.1418 3.3645 32 1 10.0768 2.7689 5.0922 33 1 9.1412 1.8765 3.8689 34 1 9.2100 6.2749 6.5813 35 1 10.5479 4.5289 7.5131 36 1 11.5043 4.7614 4.1752 37 1 10.7979 7.0893 4.1983 38 1 6.2987 6.6959 6.3996 39 1 7.7505 7.5161 5.7768 40 1 6.2474 7.5215 4.8235 41 1 5.7043 5.2419 3.5560 42 1 3.5255 1.5207 2.1876 43 1 4.4848 0.0707 1.6600 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:47:02 Heat of formation + Delta-G solvation = -50.646010 kcal Electronic energy + Delta-G solvation = -23949.432125 eV Core-core repulsion = 20383.623937 eV Total energy + Delta-G solvation = -3565.808188 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.65886 -41.02448 -39.46494 -38.18822 -37.58883 -34.83198 -33.69109 -32.98958 -29.85825 -29.23134 -27.60802 -26.97755 -26.72073 -26.21555 -23.67077 -22.11138 -21.13699 -20.49314 -19.92007 -19.19533 -18.22172 -17.70210 -17.21201 -16.93711 -16.74022 -16.44261 -15.91548 -15.86071 -15.52512 -15.15514 -15.03613 -14.64205 -14.29071 -14.15221 -13.90115 -13.83822 -13.69692 -13.63339 -13.29129 -13.22481 -13.03907 -13.03452 -12.57176 -12.43853 -12.31678 -12.12837 -11.76947 -11.62248 -11.47224 -10.82967 -10.65499 -10.49832 -10.12423 -9.45680 -8.98595 -4.87214 0.42006 1.24255 1.67077 1.82475 1.92936 2.06128 2.22935 2.38827 2.71241 3.34583 3.48464 3.52368 3.70773 3.73673 3.79471 3.81955 3.99428 4.18401 4.20871 4.25668 4.31425 4.34984 4.40096 4.43721 4.46333 4.49117 4.52865 4.62824 4.64730 4.73105 4.75183 4.76421 4.91169 4.99947 5.01796 5.11294 5.17507 5.39135 5.41721 5.50225 5.72975 5.94584 6.14527 6.26392 6.46378 6.80379 7.18464 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.073 3.927 4 C -0.106 4.106 5 H 0.106 0.894 6 C -0.138 4.138 7 C 0.125 3.875 8 H 0.121 0.879 9 N -0.724 5.724 10 C 0.593 3.407 11 O -0.520 6.520 12 C -0.070 4.070 13 C -0.039 4.039 14 C -0.099 4.099 15 C -0.171 4.171 16 C -0.024 4.024 17 O -0.544 6.544 18 Si 0.668 3.332 19 C 0.078 3.922 20 C -0.096 4.096 21 N -0.535 5.535 22 C -0.144 4.144 23 H 0.041 0.959 24 H 0.088 0.912 25 H 0.041 0.959 26 H 0.051 0.949 27 H 0.049 0.951 28 H 0.081 0.919 29 H 0.086 0.914 30 H 0.393 0.607 31 H 0.064 0.936 32 H 0.079 0.921 33 H 0.081 0.919 34 H 0.066 0.934 35 H 0.379 0.621 36 H -0.246 1.246 37 H -0.265 1.265 38 H 0.083 0.917 39 H 0.087 0.913 40 H 0.071 0.929 41 H 0.416 0.584 42 H 0.084 0.916 43 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.974 6.195 1.996 7.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.308 6.308 3 C -0.004 4.004 4 C -0.125 4.125 5 H 0.124 0.876 6 C -0.177 4.177 7 C 0.020 3.980 8 H 0.139 0.861 9 N -0.374 5.374 10 C 0.381 3.619 11 O -0.396 6.396 12 C -0.180 4.180 13 C -0.048 4.048 14 C -0.155 4.155 15 C -0.178 4.178 16 C -0.135 4.135 17 O -0.349 6.349 18 Si 0.568 3.432 19 C -0.041 4.041 20 C -0.153 4.153 21 N -0.133 5.133 22 C -0.182 4.182 23 H 0.060 0.940 24 H 0.106 0.894 25 H 0.059 0.941 26 H 0.070 0.930 27 H 0.067 0.933 28 H 0.100 0.900 29 H 0.105 0.895 30 H 0.226 0.774 31 H 0.082 0.918 32 H 0.097 0.903 33 H 0.100 0.900 34 H 0.084 0.916 35 H 0.227 0.773 36 H -0.170 1.170 37 H -0.190 1.190 38 H 0.101 0.899 39 H 0.106 0.894 40 H 0.090 0.910 41 H 0.254 0.746 42 H 0.102 0.898 43 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.582 5.141 0.546 5.779 hybrid contribution -1.822 0.848 -0.183 2.018 sum -4.404 5.989 0.364 7.443 Atomic orbital electron populations 1.22765 0.80781 1.03072 0.99983 1.87904 1.19846 1.27708 1.95390 1.22507 0.92796 0.84978 1.00134 1.22337 0.93135 0.98308 0.98736 0.87619 1.23371 0.97073 0.97106 1.00108 1.22540 0.96447 0.89957 0.89039 0.86118 1.45855 1.19856 1.28501 1.43203 1.17010 0.81016 0.84191 0.79675 1.90840 1.53239 1.31869 1.63646 1.20113 0.96628 0.93725 1.07566 1.19846 0.94378 0.96004 0.94527 1.20527 0.95321 0.97189 1.02499 1.18490 0.95907 0.98699 1.04668 1.23866 1.02594 0.91920 0.95096 1.86512 1.60936 1.37859 1.49634 0.96464 0.81392 0.80120 0.85178 1.20264 0.92146 0.97095 0.94561 1.20515 1.03022 0.91612 1.00143 1.41768 1.17779 1.20304 1.33476 1.23531 0.97058 1.01083 0.96556 0.93991 0.89394 0.94064 0.93037 0.93263 0.89984 0.89524 0.77356 0.91770 0.90254 0.90021 0.91577 0.77344 1.17022 1.19047 0.89879 0.89442 0.91025 0.74649 0.89778 0.90345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.83 10.70 -35.23 -0.38 -1.20 16 3 C 0.07 -0.02 5.78 37.16 0.21 0.19 16 4 C -0.11 0.06 4.01 -89.80 -0.36 -0.30 16 5 H 0.11 0.01 8.14 -51.93 -0.42 -0.42 16 6 C -0.14 0.26 7.39 -25.91 -0.19 0.07 16 7 C 0.12 0.03 4.24 -67.11 -0.28 -0.26 16 8 H 0.12 0.24 7.46 -51.93 -0.39 -0.15 16 9 N -0.72 -0.20 5.35 -54.32 -0.29 -0.49 16 10 C 0.59 2.35 7.79 -12.85 -0.10 2.25 16 11 O -0.52 -3.87 14.40 5.19 0.07 -3.80 16 12 C -0.07 -0.24 7.06 -81.98 -0.58 -0.82 16 13 C -0.04 -0.19 5.87 -104.16 -0.61 -0.80 16 14 C -0.10 -0.52 8.32 36.00 0.30 -0.22 16 15 C -0.17 -0.52 4.46 -105.02 -0.47 -0.99 16 16 C -0.02 -0.01 2.74 36.01 0.10 0.08 16 17 O -0.54 -0.43 11.43 -35.23 -0.40 -0.83 16 18 Si 0.67 0.18 31.92 -169.99 -5.43 -5.24 16 19 C 0.08 0.07 7.13 -81.95 -0.58 -0.52 16 20 C -0.10 0.24 10.03 36.01 0.36 0.60 16 21 N -0.54 -0.08 5.99 -5.69 -0.03 -0.11 16 22 C -0.14 -0.03 7.43 -25.92 -0.19 -0.22 16 23 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.05 -0.06 7.84 -51.93 -0.41 -0.46 16 28 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.09 -0.28 8.08 -51.93 -0.42 -0.70 16 30 H 0.39 -1.07 7.86 -40.82 -0.32 -1.39 16 31 H 0.06 0.35 7.49 -51.93 -0.39 -0.03 16 32 H 0.08 0.36 6.68 -51.93 -0.35 0.02 16 33 H 0.08 0.52 6.49 -51.93 -0.34 0.19 16 34 H 0.07 -0.10 6.64 -51.93 -0.34 -0.45 16 35 H 0.38 -1.63 8.74 45.56 0.40 -1.23 16 36 H -0.25 -0.92 6.10 56.52 0.34 -0.57 16 37 H -0.27 -0.83 7.11 56.52 0.40 -0.43 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.09 -0.27 7.14 -51.93 -0.37 -0.64 16 40 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 41 H 0.42 -1.44 8.19 -40.82 -0.33 -1.78 16 42 H 0.08 -0.02 7.89 -51.93 -0.41 -0.43 16 43 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 LS Contribution 350.04 15.07 5.28 5.28 Total: 0.00 -9.74 350.04 -9.19 -18.93 By element: Atomic # 1 Polarization: -5.98 SS G_CDS: -6.73 Total: -12.71 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -1.28 Total: 0.18 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.32 Total: -0.60 kcal Atomic # 8 Polarization: -5.13 SS G_CDS: -0.71 Total: -5.83 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: -5.43 Total: -5.24 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -9.74 -9.19 -18.93 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.711 kcal (2) G-P(sol) polarization free energy of solvation -9.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.452 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.935 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.646 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds