Wall clock time and date at job start Sat Mar 6 2021 20:47:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42905 * 114.00160 * 2 1 4 4 C 1.52996 * 109.47037 * 180.02562 * 3 2 1 5 5 H 1.09000 * 112.85027 * 43.80973 * 4 3 2 6 6 C 1.53782 * 113.61424 * 175.00324 * 4 3 2 7 7 C 1.53776 * 87.08339 * 140.06514 * 6 4 3 8 8 H 1.09004 * 113.61073 * 89.20232 * 7 6 4 9 9 N 1.46497 * 113.61625 * 220.01665 * 7 6 4 10 10 C 1.34770 * 120.00094 * 205.00115 * 9 7 6 11 11 O 1.21615 * 120.00243 * 0.02562 * 10 9 7 12 12 C 1.47312 * 120.00115 * 180.02562 * 10 9 7 13 13 C 1.40295 * 120.13515 * 179.97438 * 12 10 9 14 14 O 1.35654 * 120.11944 * 359.70387 * 13 12 10 15 15 C 1.42903 * 116.99911 * 179.97438 * 14 13 12 16 16 C 1.38441 * 119.75692 * 179.72709 * 13 12 10 17 17 C 1.38684 * 120.03472 * 0.02562 * 16 13 12 18 18 O 1.35714 * 119.86524 * 179.97438 * 17 16 13 19 19 C 1.42903 * 116.99675 * 0.02562 * 18 17 16 20 20 C 1.39183 * 120.27196 * 0.02562 * 17 16 13 21 21 C 1.50701 * 119.87970 * 179.97438 * 20 17 16 22 22 O 1.42901 * 109.47253 * 74.99864 * 21 20 17 23 23 Si 1.86305 * 109.47034 * 195.00019 * 21 20 17 24 24 C 1.37544 * 120.24428 * 359.95121 * 20 17 16 25 25 C 1.53773 * 87.08136 * 334.56953 * 7 6 4 26 26 H 1.09005 * 109.46903 * 299.99632 * 1 2 3 27 27 H 1.09005 * 109.47576 * 59.99603 * 1 2 3 28 28 H 1.09001 * 109.47517 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46673 * 60.00625 * 3 2 1 30 30 H 1.09001 * 109.47288 * 300.00794 * 3 2 1 31 31 H 1.09001 * 113.61258 * 25.51435 * 6 4 3 32 32 H 1.09000 * 113.61373 * 254.61600 * 6 4 3 33 33 H 0.97005 * 120.00037 * 25.00766 * 9 7 6 34 34 H 1.09003 * 109.46991 * 60.00255 * 15 14 13 35 35 H 1.08997 * 109.47359 * 179.97438 * 15 14 13 36 36 H 1.08998 * 109.46735 * 300.00083 * 15 14 13 37 37 H 1.07998 * 119.97842 * 180.02562 * 16 13 12 38 38 H 1.09004 * 109.46810 * 179.97438 * 19 18 17 39 39 H 1.08998 * 109.47257 * 299.99704 * 19 18 17 40 40 H 1.09001 * 109.47118 * 60.00297 * 19 18 17 41 41 H 1.09002 * 109.47192 * 314.99804 * 21 20 17 42 42 H 0.96698 * 113.99683 * 60.00474 * 22 21 20 43 43 H 1.48498 * 109.99796 * 179.97438 * 23 21 20 44 44 H 1.48498 * 110.00130 * 301.31572 * 23 21 20 45 45 H 1.07995 * 120.02519 * 180.02562 * 24 20 17 46 46 H 1.08999 * 113.61859 * 139.97675 * 25 7 6 47 47 H 1.09000 * 113.61841 * 270.88261 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1846 -0.0006 5 1 3.8998 0.4287 -0.6963 6 6 4.2603 2.5353 -0.1234 7 6 5.2691 1.9983 0.9055 8 1 6.1083 1.4660 0.4574 9 7 5.6900 2.9969 1.8912 10 6 6.8801 2.8720 2.5112 11 8 7.6050 1.9306 2.2519 12 6 7.3030 3.8760 3.5028 13 6 8.5411 3.7484 4.1502 14 8 9.3508 2.6968 3.8697 15 6 10.5964 2.6330 4.5672 16 6 8.9332 4.6995 5.0767 17 6 8.1036 5.7733 5.3627 18 8 8.4912 6.7034 6.2719 19 6 9.7639 6.5124 6.8930 20 6 6.8745 5.9006 4.7220 21 6 5.9797 7.0707 5.0401 22 8 6.4984 8.2493 4.4205 23 14 4.2644 6.7339 4.3957 24 6 6.4739 4.9626 3.7993 25 6 4.1471 1.0734 1.4059 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 1.6887 1.8463 0.8901 30 1 1.6885 1.8465 -0.8899 31 1 3.6744 3.3798 0.2392 32 1 4.6928 2.7107 -1.1085 33 1 5.1119 3.7481 2.0978 34 1 10.4100 2.5811 5.6399 35 1 11.1450 1.7458 4.2509 36 1 11.1842 3.5232 4.3432 37 1 9.8857 4.6051 5.5768 38 1 9.9508 7.3245 7.5957 39 1 9.7690 5.5617 7.4262 40 1 10.5429 6.5057 6.1306 41 1 5.9403 7.2151 6.1197 42 1 6.5615 8.1920 3.4572 43 1 3.3720 7.8802 4.7035 44 1 4.3088 6.5037 2.9293 45 1 5.5197 5.0650 3.3040 46 1 4.4881 0.0687 1.6554 47 1 3.5302 1.5182 2.1867 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:47:05 Heat of formation + Delta-G solvation = -121.372494 kcal Electronic energy + Delta-G solvation = -30039.947513 eV Core-core repulsion = 25770.907781 eV Total energy + Delta-G solvation = -4269.039732 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.06246 -40.96918 -40.10766 -39.35057 -38.50160 -38.07248 -36.99882 -34.47459 -32.22936 -31.73555 -29.60847 -29.07804 -28.22996 -26.95801 -26.62558 -26.12348 -24.86569 -23.45403 -22.39763 -21.42815 -20.68576 -19.99181 -18.77455 -18.14612 -17.95718 -17.51929 -17.22123 -17.12794 -16.81174 -16.61686 -16.52159 -16.35754 -15.99493 -15.88033 -15.73841 -15.55304 -15.48777 -15.25374 -14.55559 -14.27025 -14.02202 -13.99100 -13.56962 -13.50790 -13.28207 -13.13402 -12.94089 -12.76747 -12.61692 -12.54684 -12.36620 -12.22563 -12.02849 -11.81866 -11.69555 -11.62841 -11.36120 -10.64409 -10.57280 -10.55722 -9.94304 -9.87758 -9.12657 -5.04625 -0.18890 0.12239 1.21464 1.44249 1.84827 1.90817 2.05587 2.15323 2.21474 2.70480 2.79969 3.40198 3.42667 3.47747 3.59208 3.61628 3.73188 3.80874 3.86635 3.90786 3.99111 4.05489 4.10896 4.14094 4.14957 4.23995 4.29257 4.35030 4.42656 4.43097 4.50776 4.52678 4.54662 4.57567 4.66252 4.74539 4.78890 4.79152 4.82280 4.96434 5.03737 5.05150 5.11247 5.30421 5.33752 5.64263 6.01371 6.22014 6.30109 6.44664 6.61026 7.41275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.104 0.896 6 C -0.140 4.140 7 C 0.126 3.874 8 H 0.119 0.881 9 N -0.723 5.723 10 C 0.567 3.433 11 O -0.517 6.517 12 C -0.209 4.209 13 C 0.235 3.765 14 O -0.274 6.274 15 C 0.018 3.982 16 C -0.314 4.314 17 C 0.223 3.777 18 O -0.296 6.296 19 C 0.021 3.979 20 C -0.195 4.195 21 C -0.057 4.057 22 O -0.524 6.524 23 Si 0.680 3.320 24 C -0.013 4.013 25 C -0.143 4.143 26 H 0.041 0.959 27 H 0.041 0.959 28 H 0.087 0.913 29 H 0.051 0.949 30 H 0.051 0.949 31 H 0.087 0.913 32 H 0.080 0.920 33 H 0.396 0.604 34 H 0.058 0.942 35 H 0.107 0.893 36 H 0.057 0.943 37 H 0.145 0.855 38 H 0.107 0.893 39 H 0.060 0.940 40 H 0.059 0.941 41 H 0.118 0.882 42 H 0.372 0.628 43 H -0.253 1.253 44 H -0.257 1.257 45 H 0.140 0.860 46 H 0.076 0.924 47 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.156 1.394 2.080 2.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.005 4.005 4 C -0.126 4.126 5 H 0.122 0.878 6 C -0.178 4.178 7 C 0.021 3.979 8 H 0.137 0.863 9 N -0.375 5.375 10 C 0.355 3.645 11 O -0.393 6.393 12 C -0.213 4.213 13 C 0.185 3.815 14 O -0.184 6.184 15 C -0.077 4.077 16 C -0.334 4.334 17 C 0.175 3.825 18 O -0.207 6.207 19 C -0.073 4.073 20 C -0.196 4.196 21 C -0.167 4.167 22 O -0.330 6.330 23 Si 0.582 3.418 24 C -0.032 4.032 25 C -0.182 4.182 26 H 0.060 0.940 27 H 0.059 0.941 28 H 0.105 0.895 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.106 0.894 32 H 0.099 0.901 33 H 0.231 0.769 34 H 0.077 0.923 35 H 0.125 0.875 36 H 0.076 0.924 37 H 0.162 0.838 38 H 0.125 0.875 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.136 0.864 42 H 0.219 0.781 43 H -0.178 1.178 44 H -0.182 1.182 45 H 0.157 0.843 46 H 0.095 0.905 47 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -1.219 1.009 1.920 2.488 hybrid contribution 0.725 1.187 -0.354 1.436 sum -0.494 2.196 1.566 2.742 Atomic orbital electron populations 1.22760 0.80864 1.02989 0.99985 1.87901 1.19772 1.27809 1.95395 1.22520 0.92857 0.84901 1.00183 1.22333 0.93044 0.98331 0.98878 0.87779 1.23381 0.97186 0.97089 1.00149 1.22482 0.96261 0.90048 0.89118 0.86323 1.45880 1.19948 1.28577 1.43125 1.17837 0.81099 0.85028 0.80569 1.90845 1.52871 1.32101 1.63521 1.19063 0.95760 1.00451 1.06048 1.18733 0.88537 0.85099 0.89107 1.86405 1.29097 1.41144 1.61715 1.23244 0.83734 1.03754 0.96929 1.21305 1.04333 0.99428 1.08309 1.18708 0.91422 0.86024 0.86326 1.86160 1.36918 1.45644 1.51937 1.23216 0.82917 1.03558 0.97649 1.19357 0.96164 1.01002 1.03112 1.24793 1.04672 0.84105 1.03168 1.86655 1.85348 1.36489 1.24478 0.95243 0.76731 0.88124 0.81722 1.20883 0.97669 0.90989 0.93630 1.23534 0.97139 1.01032 0.96513 0.94018 0.94059 0.89484 0.93096 0.93128 0.89448 0.90120 0.76913 0.92347 0.87457 0.92433 0.83773 0.87506 0.92184 0.92278 0.86369 0.78061 1.17762 1.18247 0.84325 0.90476 0.89552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.79 10.70 -35.23 -0.38 -1.17 16 3 C 0.07 -0.02 5.78 37.16 0.21 0.19 16 4 C -0.11 0.06 4.01 -89.81 -0.36 -0.30 16 5 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 6 C -0.14 0.24 7.39 -25.92 -0.19 0.05 16 7 C 0.13 0.04 4.24 -67.13 -0.28 -0.25 16 8 H 0.12 0.24 7.46 -51.93 -0.39 -0.14 16 9 N -0.72 -0.32 5.30 -54.14 -0.29 -0.61 16 10 C 0.57 2.05 7.76 -12.57 -0.10 1.95 16 11 O -0.52 -3.84 14.75 -16.66 -0.25 -4.09 16 12 C -0.21 -0.48 5.89 -104.83 -0.62 -1.10 16 13 C 0.23 0.63 6.69 -38.73 -0.26 0.37 16 14 O -0.27 -0.99 8.56 -40.59 -0.35 -1.34 16 15 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 16 C -0.31 -0.25 8.01 -39.34 -0.31 -0.57 16 17 C 0.22 0.27 6.67 -39.07 -0.26 0.01 16 18 O -0.30 -0.33 9.80 -18.85 -0.18 -0.52 16 19 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 20 C -0.20 -0.09 5.27 -104.52 -0.55 -0.64 16 21 C -0.06 0.00 2.37 36.01 0.09 0.09 16 22 O -0.52 -0.76 12.88 -35.23 -0.45 -1.21 16 23 Si 0.68 -1.22 30.24 -169.99 -5.14 -6.36 16 24 C -0.01 0.00 8.14 -39.23 -0.32 -0.32 16 25 C -0.14 0.00 7.43 -25.92 -0.19 -0.20 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 29 H 0.05 -0.07 7.85 -51.93 -0.41 -0.47 16 30 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 -0.26 8.08 -51.93 -0.42 -0.68 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.40 -0.85 6.75 -40.82 -0.28 -1.12 16 34 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 35 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 37 H 0.14 -0.20 4.50 -52.49 -0.24 -0.44 16 38 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 40 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 41 H 0.12 0.01 7.82 -51.93 -0.41 -0.40 16 42 H 0.37 -0.61 8.70 45.56 0.40 -0.21 16 43 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 44 H -0.26 0.35 6.68 56.52 0.38 0.73 16 45 H 0.14 -0.35 3.16 -52.49 -0.17 -0.51 16 46 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 47 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 LS Contribution 382.39 15.07 5.76 5.76 Total: 0.00 -9.57 382.39 -8.26 -17.83 By element: Atomic # 1 Polarization: -3.68 SS G_CDS: -6.93 Total: -10.61 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -0.05 Total: 2.32 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.29 Total: -0.61 kcal Atomic # 8 Polarization: -6.72 SS G_CDS: -1.61 Total: -8.33 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.14 Total: -6.36 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -9.57 -8.26 -17.83 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.543 kcal (2) G-P(sol) polarization free energy of solvation -9.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds