Wall clock time and date at job start Sat Mar 6 2021 20:47:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42895 * 114.00315 * 2 1 4 4 C 1.52998 * 109.47766 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.84385 * 43.80289 * 4 3 2 6 6 C 1.53773 * 113.62001 * 175.00221 * 4 3 2 7 7 C 1.53780 * 87.08374 * 140.06655 * 6 4 3 8 8 H 1.09003 * 113.61514 * 89.20162 * 7 6 4 9 9 N 1.46501 * 113.61593 * 220.02141 * 7 6 4 10 10 C 1.34773 * 119.99753 * 205.00128 * 9 7 6 11 11 O 1.21569 * 120.00436 * 359.97438 * 10 9 7 12 12 C 1.47697 * 119.99679 * 179.97438 * 10 9 7 13 13 C 1.39827 * 120.16751 * 180.02562 * 12 10 9 14 14 F 1.35109 * 120.10604 * 359.95663 * 13 12 10 15 15 C 1.38313 * 119.78135 * 179.97438 * 13 12 10 16 16 C 1.38203 * 120.11627 * 359.74927 * 15 13 12 17 17 C 1.38465 * 120.34014 * 0.50939 * 16 15 13 18 18 C 1.50699 * 119.89177 * 179.76624 * 17 16 15 19 19 O 1.42901 * 109.46830 * 119.72260 * 18 17 16 20 20 Si 1.86298 * 109.46950 * 359.72697 * 18 17 16 21 21 C 1.37849 * 120.21356 * 359.48665 * 17 16 15 22 22 C 1.53784 * 87.08112 * 334.56866 * 7 6 4 23 23 H 1.09005 * 109.47136 * 179.97438 * 1 2 3 24 24 H 1.08995 * 109.47079 * 299.99465 * 1 2 3 25 25 H 1.09000 * 109.47115 * 59.99387 * 1 2 3 26 26 H 1.09007 * 109.46669 * 59.99891 * 3 2 1 27 27 H 1.08998 * 109.47528 * 300.00650 * 3 2 1 28 28 H 1.09007 * 113.61579 * 25.51513 * 6 4 3 29 29 H 1.09005 * 113.69245 * 254.62791 * 6 4 3 30 30 H 0.96995 * 119.99897 * 24.99955 * 9 7 6 31 31 H 1.08000 * 119.94080 * 180.02562 * 15 13 12 32 32 H 1.08000 * 119.82881 * 180.25763 * 16 15 13 33 33 H 1.08991 * 109.47351 * 239.72408 * 18 17 16 34 34 H 0.96708 * 114.00246 * 299.99864 * 19 18 17 35 35 H 1.48506 * 109.99834 * 180.02562 * 20 18 17 36 36 H 1.48502 * 110.00011 * 301.31529 * 20 18 17 37 37 H 1.08001 * 120.05856 * 180.23401 * 21 17 16 38 38 H 1.08996 * 113.61391 * 139.97891 * 22 7 6 39 39 H 1.08999 * 113.61363 * 270.88713 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1847 -0.0006 5 1 3.8998 0.4287 -0.6962 6 6 4.2604 2.5352 -0.1234 7 6 5.2692 1.9982 0.9055 8 1 6.1084 1.4660 0.4575 9 7 5.6900 2.9969 1.8913 10 6 6.8801 2.8720 2.5112 11 8 7.6044 1.9304 2.2527 12 6 7.3046 3.8792 3.5047 13 6 8.5389 3.7534 4.1496 14 9 9.3479 2.7089 3.8667 15 6 8.9286 4.7015 5.0781 16 6 8.1032 5.7724 5.3640 17 6 6.8775 5.8990 4.7322 18 6 5.9832 7.0681 5.0554 19 8 5.7506 7.8317 3.8702 20 14 6.8051 8.1434 6.3356 21 6 6.4754 4.9622 3.8044 22 6 4.1471 1.0734 1.4059 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 1.6886 1.8463 0.8901 27 1 1.6886 1.8464 -0.8899 28 1 3.6745 3.3799 0.2392 29 1 4.6932 2.7121 -1.1081 30 1 5.1120 3.7480 2.0978 31 1 9.8816 4.6071 5.5775 32 1 8.4139 6.5123 6.0868 33 1 5.0330 6.7021 5.4442 34 1 6.5543 8.1898 3.4688 35 1 5.9329 9.2997 6.6635 36 1 7.0814 7.3524 7.5618 37 1 5.5205 5.0655 3.3103 38 1 4.4882 0.0687 1.6555 39 1 3.5302 1.5183 2.1867 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:47:07 Heat of formation + Delta-G solvation = -100.124416 kcal Electronic energy + Delta-G solvation = -23530.016567 eV Core-core repulsion = 19740.883868 eV Total energy + Delta-G solvation = -3789.132700 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.85347 -41.51527 -40.54605 -39.45109 -38.18849 -37.58888 -34.78967 -32.68275 -32.33858 -29.67041 -27.06909 -26.76458 -26.72067 -25.61388 -23.89700 -22.55757 -21.60070 -20.71899 -19.21528 -18.37602 -18.31225 -17.70923 -17.32954 -17.02392 -16.85992 -16.78618 -16.35683 -16.09204 -15.94691 -15.79041 -15.59165 -15.46364 -14.84203 -14.45727 -14.35939 -14.05269 -13.76557 -13.58397 -13.29291 -13.25034 -13.00541 -12.88194 -12.44244 -12.29474 -12.10977 -11.96389 -11.73228 -11.44127 -11.01202 -10.63240 -10.60990 -10.43273 -10.06484 -9.84534 -5.19616 -0.52743 -0.12220 1.09922 1.46840 1.65178 1.83056 1.99403 2.46680 2.73967 3.00658 3.19866 3.33245 3.37403 3.43506 3.52035 3.54343 3.76044 3.83256 3.86300 3.98943 4.23679 4.25785 4.29585 4.38430 4.41845 4.47463 4.50096 4.57852 4.63362 4.68067 4.70741 4.75688 4.80542 4.84174 4.95950 5.01523 5.02735 5.21587 5.48277 5.53241 6.17764 6.36815 6.38627 7.13661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.106 4.106 5 H 0.105 0.895 6 C -0.138 4.138 7 C 0.123 3.877 8 H 0.120 0.880 9 N -0.715 5.715 10 C 0.559 3.441 11 O -0.519 6.519 12 C -0.175 4.175 13 C 0.167 3.833 14 F -0.111 7.111 15 C -0.156 4.156 16 C -0.061 4.061 17 C -0.141 4.141 18 C -0.067 4.067 19 O -0.539 6.539 20 Si 0.688 3.312 21 C -0.031 4.031 22 C -0.144 4.144 23 H 0.087 0.913 24 H 0.041 0.959 25 H 0.042 0.958 26 H 0.050 0.950 27 H 0.052 0.948 28 H 0.088 0.912 29 H 0.082 0.918 30 H 0.400 0.600 31 H 0.150 0.850 32 H 0.142 0.858 33 H 0.118 0.882 34 H 0.381 0.619 35 H -0.252 1.252 36 H -0.255 1.255 37 H 0.139 0.861 38 H 0.077 0.923 39 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.730 5.739 0.358 6.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.005 4.005 4 C -0.125 4.125 5 H 0.123 0.877 6 C -0.176 4.176 7 C 0.018 3.982 8 H 0.138 0.862 9 N -0.366 5.366 10 C 0.346 3.654 11 O -0.395 6.395 12 C -0.179 4.179 13 C 0.146 3.854 14 F -0.088 7.088 15 C -0.175 4.175 16 C -0.078 4.078 17 C -0.142 4.142 18 C -0.177 4.177 19 O -0.344 6.344 20 Si 0.590 3.410 21 C -0.050 4.050 22 C -0.183 4.183 23 H 0.106 0.894 24 H 0.059 0.941 25 H 0.060 0.940 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.107 0.893 29 H 0.101 0.899 30 H 0.236 0.764 31 H 0.168 0.832 32 H 0.159 0.841 33 H 0.135 0.865 34 H 0.229 0.771 35 H -0.176 1.176 36 H -0.180 1.180 37 H 0.156 0.844 38 H 0.096 0.904 39 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -1.729 5.026 1.089 5.426 hybrid contribution -0.808 -0.094 -0.037 0.814 sum -2.537 4.932 1.053 5.645 Atomic orbital electron populations 1.22763 0.80804 1.03027 1.00003 1.87899 1.19825 1.27769 1.95398 1.22511 0.92783 0.84942 1.00215 1.22329 0.93138 0.98364 0.98697 0.87674 1.23368 0.96995 0.97125 1.00096 1.22564 0.96429 0.90024 0.89140 0.86199 1.45861 1.19552 1.28610 1.42611 1.18013 0.81559 0.85016 0.80805 1.90872 1.53038 1.32107 1.63531 1.20098 0.96159 0.99113 1.02513 1.17761 0.87721 0.85312 0.94577 1.91636 1.70982 1.54478 1.91744 1.21174 1.02396 0.94646 0.99286 1.21098 0.92524 0.96728 0.97491 1.20330 0.96188 0.98502 0.99136 1.25042 1.02788 0.93804 0.96097 1.86515 1.36461 1.70095 1.41361 0.94733 0.87188 0.80707 0.78373 1.21008 0.98410 0.90718 0.94872 1.23535 0.97057 1.01002 0.96668 0.89445 0.94056 0.93985 0.93181 0.93002 0.89307 0.89935 0.76386 0.83223 0.84116 0.86475 0.77108 1.17646 1.18007 0.84369 0.90418 0.89659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.82 10.70 -35.23 -0.38 -1.19 16 3 C 0.07 -0.02 5.78 37.16 0.21 0.19 16 4 C -0.11 0.07 4.01 -89.81 -0.36 -0.29 16 5 H 0.11 0.00 8.14 -51.93 -0.42 -0.43 16 6 C -0.14 0.28 7.39 -25.92 -0.19 0.09 16 7 C 0.12 0.00 4.24 -67.12 -0.28 -0.28 16 8 H 0.12 0.21 7.46 -51.93 -0.39 -0.18 16 9 N -0.71 0.07 5.31 -54.00 -0.29 -0.21 16 10 C 0.56 1.73 7.77 -12.40 -0.10 1.63 16 11 O -0.52 -3.77 14.94 5.30 0.08 -3.69 16 12 C -0.17 -0.23 5.88 -104.91 -0.62 -0.85 16 13 C 0.17 0.34 7.29 -38.96 -0.28 0.05 16 14 F -0.11 -0.54 15.55 2.25 0.04 -0.51 16 15 C -0.16 0.15 10.01 -39.57 -0.40 -0.25 16 16 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 17 C -0.14 0.30 5.38 -104.68 -0.56 -0.26 16 18 C -0.07 0.18 2.82 36.01 0.10 0.28 16 19 O -0.54 1.28 12.76 -35.23 -0.45 0.83 16 20 Si 0.69 -2.14 29.78 -169.99 -5.06 -7.20 16 21 C -0.03 0.04 9.09 -39.19 -0.36 -0.31 16 22 C -0.14 0.00 7.43 -25.92 -0.19 -0.20 16 23 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 26 H 0.05 -0.06 7.85 -51.92 -0.41 -0.46 16 27 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.09 -0.29 8.08 -51.93 -0.42 -0.71 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.40 -1.12 6.76 -40.82 -0.28 -1.40 16 31 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 32 H 0.14 -0.66 4.86 -52.49 -0.25 -0.92 16 33 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 34 H 0.38 -2.28 8.70 45.56 0.40 -1.89 16 35 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 36 H -0.26 0.21 7.11 56.52 0.40 0.61 16 37 H 0.14 -0.45 6.41 -52.49 -0.34 -0.79 16 38 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 39 H 0.08 -0.04 7.90 -51.93 -0.41 -0.45 16 LS Contribution 331.04 15.07 4.99 4.99 Total: 0.00 -8.62 331.04 -8.42 -17.03 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -5.09 Total: -10.76 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: -2.26 Total: 0.72 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.29 Total: -0.21 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.75 Total: -4.06 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.51 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: -5.06 Total: -7.20 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -8.62 -8.42 -17.03 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.091 kcal (2) G-P(sol) polarization free energy of solvation -8.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.416 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.034 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds