Wall clock time and date at job start Sat Mar 6 2021 20:47:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42895 * 114.00315 * 2 1 4 4 C 1.52998 * 109.47766 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.84385 * 43.80289 * 4 3 2 6 6 C 1.53773 * 113.62001 * 175.00221 * 4 3 2 7 7 C 1.53780 * 87.08374 * 140.06655 * 6 4 3 8 8 H 1.09003 * 113.61514 * 89.20162 * 7 6 4 9 9 N 1.46501 * 113.61593 * 220.02141 * 7 6 4 10 10 C 1.34773 * 119.99753 * 205.00128 * 9 7 6 11 11 O 1.21569 * 120.00436 * 359.97438 * 10 9 7 12 12 C 1.47697 * 119.99679 * 179.97438 * 10 9 7 13 13 C 1.39827 * 120.16751 * 180.02562 * 12 10 9 14 14 F 1.35109 * 120.10604 * 359.95663 * 13 12 10 15 15 C 1.38313 * 119.78135 * 179.97438 * 13 12 10 16 16 C 1.38203 * 120.11627 * 359.74927 * 15 13 12 17 17 C 1.38465 * 120.34014 * 0.50939 * 16 15 13 18 18 C 1.50699 * 119.89177 * 179.76624 * 17 16 15 19 19 O 1.42901 * 109.46830 * 119.72260 * 18 17 16 20 20 Si 1.86298 * 109.46950 * 359.72697 * 18 17 16 21 21 C 1.37849 * 120.21356 * 359.48665 * 17 16 15 22 22 C 1.53784 * 87.08112 * 334.56866 * 7 6 4 23 23 H 1.09005 * 109.47136 * 179.97438 * 1 2 3 24 24 H 1.08995 * 109.47079 * 299.99465 * 1 2 3 25 25 H 1.09000 * 109.47115 * 59.99387 * 1 2 3 26 26 H 1.09007 * 109.46669 * 59.99891 * 3 2 1 27 27 H 1.08998 * 109.47528 * 300.00650 * 3 2 1 28 28 H 1.09007 * 113.61579 * 25.51513 * 6 4 3 29 29 H 1.09005 * 113.69245 * 254.62791 * 6 4 3 30 30 H 0.96995 * 119.99897 * 24.99955 * 9 7 6 31 31 H 1.08000 * 119.94080 * 180.02562 * 15 13 12 32 32 H 1.08000 * 119.82881 * 180.25763 * 16 15 13 33 33 H 1.08991 * 109.47351 * 239.72408 * 18 17 16 34 34 H 0.96708 * 114.00246 * 299.99864 * 19 18 17 35 35 H 1.48506 * 109.99834 * 180.02562 * 20 18 17 36 36 H 1.48502 * 110.00011 * 301.31529 * 20 18 17 37 37 H 1.08001 * 120.05856 * 180.23401 * 21 17 16 38 38 H 1.08996 * 113.61391 * 139.97891 * 22 7 6 39 39 H 1.08999 * 113.61363 * 270.88713 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1847 -0.0006 5 1 3.8998 0.4287 -0.6962 6 6 4.2604 2.5352 -0.1234 7 6 5.2692 1.9982 0.9055 8 1 6.1084 1.4660 0.4575 9 7 5.6900 2.9969 1.8913 10 6 6.8801 2.8720 2.5112 11 8 7.6044 1.9304 2.2527 12 6 7.3046 3.8792 3.5047 13 6 8.5389 3.7534 4.1496 14 9 9.3479 2.7089 3.8667 15 6 8.9286 4.7015 5.0781 16 6 8.1032 5.7724 5.3640 17 6 6.8775 5.8990 4.7322 18 6 5.9832 7.0681 5.0554 19 8 5.7506 7.8317 3.8702 20 14 6.8051 8.1434 6.3356 21 6 6.4754 4.9622 3.8044 22 6 4.1471 1.0734 1.4059 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 1.6886 1.8463 0.8901 27 1 1.6886 1.8464 -0.8899 28 1 3.6745 3.3799 0.2392 29 1 4.6932 2.7121 -1.1081 30 1 5.1120 3.7480 2.0978 31 1 9.8816 4.6071 5.5775 32 1 8.4139 6.5123 6.0868 33 1 5.0330 6.7021 5.4442 34 1 6.5543 8.1898 3.4688 35 1 5.9329 9.2997 6.6635 36 1 7.0814 7.3524 7.5618 37 1 5.5205 5.0655 3.3103 38 1 4.4882 0.0687 1.6555 39 1 3.5302 1.5183 2.1867 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:47:07 Heat of formation + Delta-G solvation = -100.878496 kcal Electronic energy + Delta-G solvation = -23530.049267 eV Core-core repulsion = 19740.883868 eV Total energy + Delta-G solvation = -3789.165399 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -50.02552 -41.58474 -40.48366 -39.53121 -38.22371 -37.42291 -34.93050 -32.63438 -32.24298 -29.63846 -27.04146 -26.69376 -26.61961 -25.60575 -23.84779 -22.51494 -21.70804 -20.69233 -19.19927 -18.35960 -18.29499 -17.68650 -17.30365 -17.04286 -16.96925 -16.79137 -16.29350 -16.05945 -15.96677 -15.75027 -15.68127 -15.43669 -14.74686 -14.47900 -14.37943 -14.05106 -13.64983 -13.49224 -13.24587 -13.23537 -12.99016 -12.84634 -12.43588 -12.15209 -12.10492 -11.85782 -11.69247 -11.44965 -11.17053 -10.60933 -10.47802 -10.41485 -10.10993 -9.81735 -4.95774 -0.51368 -0.04013 1.31997 1.57484 1.67457 1.93769 2.02751 2.46051 2.79644 3.03940 3.35282 3.39406 3.47932 3.56749 3.58939 3.66218 3.76749 3.86629 4.00164 4.10001 4.29023 4.36310 4.44233 4.46932 4.50887 4.56934 4.58417 4.66958 4.72729 4.75749 4.78797 4.83886 4.84580 4.94020 4.96504 5.02366 5.12770 5.18933 5.48707 5.58845 6.22772 6.34829 6.79894 7.02799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.419 6.419 3 C 0.070 3.930 4 C -0.105 4.105 5 H 0.093 0.907 6 C -0.118 4.118 7 C 0.115 3.885 8 H 0.096 0.904 9 N -0.697 5.697 10 C 0.553 3.447 11 O -0.574 6.574 12 C -0.189 4.189 13 C 0.132 3.868 14 F -0.138 7.138 15 C -0.152 4.152 16 C -0.051 4.051 17 C -0.134 4.134 18 C -0.065 4.065 19 O -0.551 6.551 20 Si 0.770 3.230 21 C -0.024 4.024 22 C -0.144 4.144 23 H 0.089 0.911 24 H 0.049 0.951 25 H 0.051 0.949 26 H 0.061 0.939 27 H 0.063 0.937 28 H 0.112 0.888 29 H 0.089 0.911 30 H 0.416 0.584 31 H 0.167 0.833 32 H 0.168 0.832 33 H 0.119 0.881 34 H 0.398 0.602 35 H -0.302 1.302 36 H -0.282 1.282 37 H 0.159 0.841 38 H 0.055 0.945 39 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.736 7.859 0.647 8.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.339 6.339 3 C -0.006 4.006 4 C -0.124 4.124 5 H 0.112 0.888 6 C -0.156 4.156 7 C 0.011 3.989 8 H 0.114 0.886 9 N -0.349 5.349 10 C 0.341 3.659 11 O -0.454 6.454 12 C -0.193 4.193 13 C 0.112 3.888 14 F -0.116 7.116 15 C -0.170 4.170 16 C -0.069 4.069 17 C -0.134 4.134 18 C -0.176 4.176 19 O -0.359 6.359 20 Si 0.676 3.324 21 C -0.043 4.043 22 C -0.182 4.182 23 H 0.108 0.892 24 H 0.068 0.932 25 H 0.069 0.931 26 H 0.080 0.920 27 H 0.081 0.919 28 H 0.130 0.870 29 H 0.107 0.893 30 H 0.255 0.745 31 H 0.185 0.815 32 H 0.185 0.815 33 H 0.137 0.863 34 H 0.248 0.752 35 H -0.230 1.230 36 H -0.208 1.208 37 H 0.176 0.824 38 H 0.074 0.926 39 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.757 7.169 1.349 7.798 hybrid contribution -0.565 -0.676 -0.077 0.884 sum -3.322 6.493 1.272 7.404 Atomic orbital electron populations 1.22884 0.79776 1.03535 1.00846 1.87861 1.21159 1.29295 1.95605 1.22625 0.92430 0.84313 1.01277 1.22283 0.93429 0.99010 0.97700 0.88840 1.23299 0.95704 0.96955 0.99646 1.22544 0.96017 0.90467 0.89920 0.88631 1.45752 1.18749 1.28746 1.41648 1.18415 0.81804 0.84738 0.80944 1.90838 1.54754 1.34371 1.65443 1.20067 0.96705 0.99746 1.02755 1.18238 0.88265 0.85845 0.96496 1.91561 1.71803 1.55965 1.92261 1.21389 1.03300 0.94044 0.98299 1.21391 0.91928 0.96401 0.97166 1.20486 0.96278 0.98266 0.98398 1.25096 1.02727 0.93453 0.96300 1.86490 1.37994 1.70085 1.41341 0.93803 0.85375 0.76862 0.76313 1.21179 0.98610 0.89686 0.94813 1.23534 0.97219 0.99901 0.97571 0.89248 0.93215 0.93080 0.92035 0.91866 0.86996 0.89284 0.74545 0.81531 0.81536 0.86349 0.75205 1.23009 1.20831 0.82369 0.92562 0.88683 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 113.37 1.25 1.22 16 2 O -0.42 -1.84 10.70 -148.98 -1.59 -3.44 16 3 C 0.07 -0.08 5.78 71.98 0.42 0.33 16 4 C -0.11 0.10 4.01 -10.27 -0.04 0.06 16 5 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 6 C -0.12 0.56 7.39 31.12 0.23 0.79 16 7 C 0.12 0.13 4.24 45.52 0.19 0.32 16 8 H 0.10 0.61 7.46 -2.39 -0.02 0.59 16 9 N -0.70 -0.21 5.31 -443.04 -2.35 -2.56 16 10 C 0.55 4.41 7.77 86.74 0.67 5.09 16 11 O -0.57 -10.27 14.94 -3.93 -0.06 -10.33 16 12 C -0.19 -0.65 5.88 -20.05 -0.12 -0.77 16 13 C 0.13 0.71 7.29 22.67 0.17 0.87 16 14 F -0.14 -1.75 15.55 44.97 0.70 -1.05 16 15 C -0.15 0.35 10.01 22.28 0.22 0.57 16 16 C -0.05 0.34 8.66 22.32 0.19 0.53 16 17 C -0.13 0.81 5.38 -19.90 -0.11 0.70 16 18 C -0.07 0.49 2.82 71.24 0.20 0.69 16 19 O -0.55 3.86 12.76 -148.98 -1.90 1.96 16 20 Si 0.77 -5.95 29.78 68.60 2.04 -3.90 16 21 C -0.02 0.09 9.09 22.52 0.20 0.30 16 22 C -0.14 -0.16 7.43 31.12 0.23 0.07 16 23 H 0.09 -0.18 8.14 -2.38 -0.02 -0.20 16 24 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 25 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 26 H 0.06 -0.22 7.85 -2.38 -0.02 -0.24 16 27 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 28 H 0.11 -1.01 8.08 -2.38 -0.02 -1.03 16 29 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 30 H 0.42 -2.74 6.76 -92.71 -0.63 -3.37 16 31 H 0.17 -1.06 8.06 -2.91 -0.02 -1.08 16 32 H 0.17 -2.01 4.86 -2.91 -0.01 -2.03 16 33 H 0.12 -0.86 7.96 -2.39 -0.02 -0.88 16 34 H 0.40 -5.75 8.70 -74.05 -0.64 -6.39 16 35 H -0.30 -0.29 7.11 99.48 0.71 0.42 16 36 H -0.28 0.88 7.11 99.48 0.71 1.59 16 37 H 0.16 -1.35 6.41 -2.91 -0.02 -1.37 16 38 H 0.06 0.30 8.14 -2.39 -0.02 0.28 16 39 H 0.09 -0.09 7.90 -2.39 -0.02 -0.11 16 Total: 0.00 -23.75 331.04 0.41 -23.34 By element: Atomic # 1 Polarization: -14.66 SS G_CDS: -0.14 Total: -14.80 kcal Atomic # 6 Polarization: 7.07 SS G_CDS: 3.71 Total: 10.78 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -2.35 Total: -2.56 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -3.55 Total: -11.81 kcal Atomic # 9 Polarization: -1.75 SS G_CDS: 0.70 Total: -1.05 kcal Atomic # 14 Polarization: -5.95 SS G_CDS: 2.04 Total: -3.90 kcal Total: -23.75 0.41 -23.34 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.534 kcal (2) G-P(sol) polarization free energy of solvation -23.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.344 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds