Wall clock time and date at job start Sat Mar 6 2021 20:47:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42898 * 114.00037 * 2 1 4 4 C 1.52994 * 109.47447 * 179.97438 * 3 2 1 5 5 H 1.09002 * 112.90622 * 43.75327 * 4 3 2 6 6 C 1.53781 * 113.61794 * 175.00107 * 4 3 2 7 7 C 1.53780 * 87.17487 * 139.94043 * 6 4 3 8 8 H 1.09003 * 113.61139 * 89.15716 * 7 6 4 9 9 N 1.46495 * 113.61456 * 220.06173 * 7 6 4 10 10 C 1.34780 * 120.00114 * 204.99704 * 9 7 6 11 11 O 1.21280 * 119.99618 * 0.02562 * 10 9 7 12 12 C 1.50700 * 119.99979 * 179.97438 * 10 9 7 13 13 N 1.46504 * 109.46878 * 180.02562 * 12 10 9 14 14 C 1.35032 * 125.93083 * 124.71980 * 13 12 10 15 15 C 1.35090 * 107.98021 * 179.83276 * 14 13 12 16 16 C 1.50693 * 126.07486 * 180.19888 * 15 14 13 17 17 O 1.42901 * 109.47394 * 105.23292 * 16 15 14 18 18 Si 1.86299 * 109.47602 * 345.22852 * 16 15 14 19 19 C 1.40840 * 107.84551 * 0.42777 * 15 14 13 20 20 C 1.48422 * 126.03919 * 179.77473 * 19 15 14 21 21 C 1.39322 * 120.11350 * 316.94364 * 20 19 15 22 22 C 1.38025 * 119.87757 * 179.72032 * 21 20 19 23 23 C 1.38320 * 120.11751 * 0.55809 * 22 21 20 24 24 C 1.38316 * 120.24130 * 359.71750 * 23 22 21 25 25 C 1.38020 * 120.12191 * 359.97438 * 24 23 22 26 26 N 1.31622 * 107.92730 * 359.73394 * 19 15 14 27 27 C 1.53783 * 113.61639 * 272.49769 * 4 3 2 28 28 H 1.09005 * 109.46844 * 179.97438 * 1 2 3 29 29 H 1.08993 * 109.47113 * 299.99828 * 1 2 3 30 30 H 1.09003 * 109.46675 * 60.00008 * 1 2 3 31 31 H 1.09006 * 109.46879 * 59.99754 * 3 2 1 32 32 H 1.08997 * 109.47218 * 300.00123 * 3 2 1 33 33 H 1.08998 * 113.61172 * 254.53370 * 6 4 3 34 34 H 1.09005 * 113.61348 * 25.34845 * 6 4 3 35 35 H 0.97002 * 120.00288 * 24.99702 * 9 7 6 36 36 H 1.08997 * 109.47258 * 300.00648 * 12 10 9 37 37 H 1.09001 * 109.46874 * 60.00508 * 12 10 9 38 38 H 1.08002 * 126.01074 * 359.97002 * 14 13 12 39 39 H 1.09000 * 109.47016 * 225.23162 * 16 15 14 40 40 H 0.96700 * 113.99680 * 299.99859 * 17 16 15 41 41 H 1.48491 * 110.00303 * 180.02562 * 18 16 15 42 42 H 1.48504 * 110.00069 * 301.32468 * 18 16 15 43 43 H 1.08006 * 120.06715 * 359.97159 * 21 20 19 44 44 H 1.08000 * 119.94536 * 180.27107 * 22 21 20 45 45 H 1.08000 * 119.88183 * 179.74156 * 23 22 21 46 46 H 1.08000 * 119.94448 * 180.02562 * 24 23 22 47 47 H 1.08001 * 120.06462 * 180.02562 * 25 24 23 48 48 H 1.08994 * 113.61489 * 334.56924 * 27 4 3 49 49 H 1.09004 * 113.60911 * 105.46884 * 27 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.9014 0.4281 -0.6934 6 6 4.2604 2.5353 -0.1221 7 6 5.2678 2.0021 0.9103 8 1 6.1082 1.4693 0.4653 9 7 5.6843 3.0034 1.8952 10 6 6.8732 2.8819 2.5183 11 8 7.5984 1.9438 2.2633 12 6 7.3019 3.9122 3.5311 13 7 8.6211 3.5574 4.0603 14 6 9.7148 4.3493 4.0583 15 6 10.7263 3.6648 4.6356 16 6 12.1308 4.1680 4.8478 17 8 12.3182 4.4900 6.2274 18 14 12.4082 5.6910 3.8114 19 6 10.2363 2.3954 4.9990 20 6 11.0122 1.3160 5.6592 21 6 12.3085 1.0285 5.2372 22 6 13.0277 0.0276 5.8584 23 6 12.4596 -0.6972 6.8905 24 6 11.1710 -0.4197 7.3096 25 6 10.4451 0.5832 6.6996 26 7 8.9684 2.3356 4.6506 27 6 4.1442 1.0751 1.4086 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 1.6886 1.8464 0.8900 32 1 1.6886 1.8464 -0.8899 33 1 4.6949 2.7098 -1.1064 34 1 3.6731 3.3804 0.2371 35 1 5.1044 3.7538 2.0989 36 1 7.3532 4.8910 3.0542 37 1 6.5792 3.9428 4.3465 38 1 9.7705 5.3542 3.6664 39 1 12.8417 3.3951 4.5553 40 1 11.7177 5.1725 6.5570 41 1 13.7900 6.1967 4.0113 42 1 12.1853 5.3770 2.3772 43 1 12.7513 1.5905 4.4281 44 1 14.0343 -0.1932 5.5350 45 1 13.0244 -1.4823 7.3711 46 1 10.7323 -0.9884 8.1162 47 1 9.4392 0.7993 7.0279 48 1 3.5256 1.5207 2.1876 49 1 4.4848 0.0707 1.6600 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:47:48 Heat of formation + Delta-G solvation = 29.914586 kcal Electronic energy + Delta-G solvation = -31033.930856 eV Core-core repulsion = 26737.747945 eV Total energy + Delta-G solvation = -4296.182910 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.42756 -41.23759 -39.85598 -39.51238 -38.23685 -37.59501 -34.85758 -34.55757 -32.23308 -31.82141 -31.29218 -29.92475 -28.61053 -27.03028 -26.73063 -25.96206 -24.37471 -23.36029 -23.15553 -21.79016 -21.51019 -21.02513 -20.61179 -18.71247 -18.38972 -17.79404 -17.52157 -17.33920 -17.02106 -16.86869 -16.62720 -16.16669 -16.14095 -15.94818 -15.62402 -15.49912 -15.37629 -15.27647 -14.79324 -14.33200 -14.22575 -14.17214 -14.01611 -13.85781 -13.63986 -13.60998 -13.30451 -13.29487 -13.02247 -12.49230 -12.38112 -12.29308 -12.15486 -11.97836 -11.78729 -11.74710 -11.61590 -11.49036 -11.14018 -10.66088 -10.51393 -10.17397 -10.14136 -9.67613 -9.64859 -9.17253 -5.07236 0.30923 0.66953 0.83281 1.23960 1.37497 1.44048 1.65615 1.86483 2.00280 2.02695 2.69891 3.07161 3.25589 3.35145 3.46465 3.50815 3.60819 3.66170 3.69720 3.74882 3.78088 3.84832 4.12725 4.18923 4.20335 4.24362 4.25193 4.34737 4.35529 4.43114 4.46071 4.48974 4.51757 4.61660 4.64841 4.69842 4.70080 4.73136 4.87003 4.89804 4.91738 4.99094 5.13473 5.15053 5.27411 5.41745 5.44505 5.73395 5.76480 5.78664 5.85899 6.14345 6.20101 6.30461 6.70823 6.75486 7.06426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.073 3.927 4 C -0.107 4.107 5 H 0.104 0.896 6 C -0.137 4.137 7 C 0.124 3.876 8 H 0.117 0.883 9 N -0.720 5.720 10 C 0.498 3.502 11 O -0.503 6.503 12 C 0.116 3.884 13 N -0.359 5.359 14 C 0.063 3.937 15 C -0.251 4.251 16 C -0.028 4.028 17 O -0.538 6.538 18 Si 0.680 3.320 19 C 0.131 3.869 20 C -0.007 4.007 21 C -0.093 4.093 22 C -0.119 4.119 23 C -0.113 4.113 24 C -0.120 4.120 25 C -0.091 4.091 26 N -0.247 5.247 27 C -0.143 4.143 28 H 0.087 0.913 29 H 0.041 0.959 30 H 0.042 0.958 31 H 0.050 0.950 32 H 0.051 0.949 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.402 0.598 36 H 0.129 0.871 37 H 0.119 0.881 38 H 0.181 0.819 39 H 0.112 0.888 40 H 0.375 0.625 41 H -0.253 1.253 42 H -0.256 1.256 43 H 0.121 0.879 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.085 0.915 49 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.951 7.251 -0.696 9.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.122 0.878 6 C -0.175 4.175 7 C 0.020 3.980 8 H 0.135 0.865 9 N -0.372 5.372 10 C 0.282 3.718 11 O -0.375 6.375 12 C -0.010 4.010 13 N -0.140 5.140 14 C -0.081 4.081 15 C -0.262 4.262 16 C -0.140 4.140 17 O -0.342 6.342 18 Si 0.582 3.418 19 C -0.035 4.035 20 C -0.009 4.009 21 C -0.113 4.113 22 C -0.137 4.137 23 C -0.131 4.131 24 C -0.138 4.138 25 C -0.110 4.110 26 N -0.067 5.067 27 C -0.182 4.182 28 H 0.106 0.894 29 H 0.060 0.940 30 H 0.060 0.940 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.099 0.901 34 H 0.107 0.893 35 H 0.236 0.764 36 H 0.147 0.853 37 H 0.136 0.864 38 H 0.197 0.803 39 H 0.129 0.871 40 H 0.221 0.779 41 H -0.178 1.178 42 H -0.181 1.181 43 H 0.139 0.861 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.104 0.896 49 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -5.579 5.679 -1.690 8.138 hybrid contribution -0.032 0.539 0.013 0.540 sum -5.611 6.218 -1.677 8.541 Atomic orbital electron populations 1.22768 0.80752 1.03072 1.00006 1.87905 1.19873 1.27748 1.95397 1.22503 0.92737 0.84972 1.00189 1.22334 0.93202 0.98351 0.98737 0.87752 1.23359 0.97009 0.97153 0.99988 1.22543 0.96369 0.89993 0.89120 0.86488 1.45889 1.19703 1.28745 1.42906 1.20599 0.81867 0.87186 0.82182 1.90841 1.52566 1.31809 1.62318 1.21528 0.83022 0.98646 0.97786 1.47853 1.08346 1.11131 1.46701 1.22213 0.86621 0.97778 1.01491 1.20455 0.97853 0.95800 1.12118 1.24399 0.93158 1.06891 0.89543 1.86528 1.61657 1.61957 1.24066 0.95411 0.85310 0.82183 0.78916 1.20595 0.91259 0.93504 0.98172 1.17694 0.93017 0.94101 0.96051 1.21076 0.93231 0.97469 0.99501 1.21064 0.99977 0.96051 0.96639 1.21246 0.95466 0.99456 0.96968 1.21099 0.94769 0.97792 1.00173 1.21162 0.99642 0.94995 0.95225 1.77819 1.13920 0.99878 1.15125 1.23556 0.97025 1.01006 0.96610 0.89417 0.94020 0.93981 0.93161 0.93033 0.90085 0.89257 0.76363 0.85300 0.86358 0.80267 0.87091 0.77859 1.17775 1.18085 0.86121 0.85683 0.85844 0.85698 0.85870 0.89607 0.90502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.70 10.70 -35.23 -0.38 -1.08 16 3 C 0.07 -0.06 5.78 37.15 0.21 0.16 16 4 C -0.11 0.13 4.01 -89.81 -0.36 -0.24 16 5 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 6 C -0.14 0.41 7.39 -25.92 -0.19 0.21 16 7 C 0.12 -0.13 4.25 -67.03 -0.28 -0.41 16 8 H 0.12 0.16 7.47 -51.93 -0.39 -0.23 16 9 N -0.72 1.70 5.36 -52.93 -0.28 1.42 16 10 C 0.50 0.33 7.86 -10.98 -0.09 0.24 16 11 O -0.50 -3.20 15.30 5.56 0.09 -3.11 16 12 C 0.12 -0.30 6.99 -5.19 -0.04 -0.34 16 13 N -0.36 -0.57 3.40 -62.58 -0.21 -0.78 16 14 C 0.06 0.00 9.96 -17.26 -0.17 -0.18 16 15 C -0.25 -0.54 5.35 -104.76 -0.56 -1.10 16 16 C -0.03 -0.03 2.52 36.00 0.09 0.06 16 17 O -0.54 -0.78 12.88 -35.23 -0.45 -1.23 16 18 Si 0.68 -0.63 30.74 -169.99 -5.22 -5.85 16 19 C 0.13 0.64 6.66 -82.78 -0.55 0.09 16 20 C -0.01 -0.03 5.74 -104.89 -0.60 -0.64 16 21 C -0.09 -0.37 8.88 -39.26 -0.35 -0.72 16 22 C -0.12 -0.34 10.03 -39.63 -0.40 -0.74 16 23 C -0.11 -0.28 10.04 -39.52 -0.40 -0.68 16 24 C -0.12 -0.35 10.03 -39.63 -0.40 -0.75 16 25 C -0.09 -0.39 9.78 -39.26 -0.38 -0.77 16 26 N -0.25 -1.35 11.67 33.43 0.39 -0.96 16 27 C -0.14 0.08 7.44 -25.83 -0.19 -0.11 16 28 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.05 -0.09 7.84 -51.93 -0.41 -0.50 16 32 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 35 H 0.40 -2.38 8.73 -40.82 -0.36 -2.73 16 36 H 0.13 -0.90 8.07 -51.93 -0.42 -1.32 16 37 H 0.12 -0.56 8.14 -51.93 -0.42 -0.98 16 38 H 0.18 -0.82 6.40 -52.49 -0.34 -1.16 16 39 H 0.11 0.23 5.57 -51.93 -0.29 -0.06 16 40 H 0.37 -0.99 8.70 45.56 0.40 -0.60 16 41 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 42 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 43 H 0.12 0.34 6.24 -52.48 -0.33 0.02 16 44 H 0.13 0.09 8.06 -52.49 -0.42 -0.33 16 45 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 46 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 47 H 0.12 0.45 8.06 -52.49 -0.42 0.03 16 48 H 0.09 -0.11 7.89 -51.93 -0.41 -0.52 16 49 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 LS Contribution 410.32 15.07 6.18 6.18 Total: 0.00 -13.14 410.32 -10.66 -23.80 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -7.23 Total: -13.60 kcal Atomic # 6 Polarization: -1.25 SS G_CDS: -3.54 Total: -4.80 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.11 Total: -0.32 kcal Atomic # 8 Polarization: -4.68 SS G_CDS: -0.75 Total: -5.42 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.22 Total: -5.85 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -13.14 -10.66 -23.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.718 kcal (2) G-P(sol) polarization free energy of solvation -13.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.804 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.915 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds