Wall clock time and date at job start Sat Mar 6 2021 20:48:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42897 * 113.99805 * 2 1 4 4 C 1.52999 * 109.47348 * 179.97438 * 3 2 1 5 5 H 1.09006 * 112.85077 * 316.19622 * 4 3 2 6 6 C 1.53779 * 113.61678 * 87.49636 * 4 3 2 7 7 C 1.53782 * 87.08143 * 139.98458 * 6 4 3 8 8 H 1.09001 * 113.68887 * 89.13016 * 7 6 4 9 9 N 1.46497 * 113.61831 * 220.02233 * 7 6 4 10 10 C 1.34780 * 120.00098 * 252.49962 * 9 7 6 11 11 O 1.21510 * 120.00000 * 0.02562 * 10 9 7 12 12 C 1.48164 * 119.99746 * 179.97438 * 10 9 7 13 13 N 1.32718 * 119.72963 * 0.02562 * 12 10 9 14 14 C 1.31521 * 121.64463 * 179.74546 * 13 12 10 15 15 C 1.38553 * 120.90337 * 0.49760 * 14 13 12 16 16 C 1.50699 * 120.32283 * 179.76611 * 15 14 13 17 17 O 1.42903 * 109.47152 * 119.72486 * 16 15 14 18 18 Si 1.86293 * 109.47431 * 359.72377 * 16 15 14 19 19 C 1.38627 * 119.35252 * 359.49344 * 15 14 13 20 20 C 1.38587 * 118.48993 * 0.24979 * 19 15 14 21 21 C 1.53781 * 113.62061 * 185.00189 * 4 3 2 22 22 H 1.09002 * 109.47098 * 59.99876 * 1 2 3 23 23 H 1.08995 * 109.46960 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.46762 * 299.99903 * 1 2 3 25 25 H 1.09005 * 109.47450 * 60.00052 * 3 2 1 26 26 H 1.09000 * 109.47593 * 299.99702 * 3 2 1 27 27 H 1.09006 * 113.60950 * 25.43891 * 6 4 3 28 28 H 1.08998 * 113.61888 * 254.53277 * 6 4 3 29 29 H 0.97003 * 119.99996 * 72.49362 * 9 7 6 30 30 H 1.08001 * 119.54577 * 180.23622 * 14 13 12 31 31 H 1.09008 * 109.47393 * 239.71881 * 16 15 14 32 32 H 0.96700 * 114.00311 * 180.02562 * 17 16 15 33 33 H 1.48506 * 109.99973 * 59.99460 * 18 16 15 34 34 H 1.48493 * 110.00375 * 181.31561 * 18 16 15 35 35 H 1.08001 * 120.75673 * 180.23049 * 19 15 14 36 36 H 1.07998 * 120.47289 * 180.02562 * 20 19 15 37 37 H 1.08997 * 113.61970 * 105.46752 * 21 4 3 38 38 H 1.08998 * 113.68657 * 334.57332 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1848 0.0006 5 1 3.9000 0.4288 0.6962 6 6 4.1453 1.0745 -1.4067 7 6 5.2679 1.9992 -0.9071 8 1 6.1077 1.4668 -0.4606 9 7 5.6873 2.9987 -1.8927 10 6 6.8767 2.8745 -2.5143 11 8 7.6010 1.9332 -2.2576 12 6 7.3005 3.8850 -3.5115 13 7 6.5049 4.9107 -3.7881 14 6 6.8456 5.8319 -4.6628 15 6 8.0522 5.7588 -5.3399 16 6 8.4270 6.8188 -6.3433 17 8 9.6358 7.4595 -5.9304 18 14 7.0613 8.0810 -6.4528 19 6 8.9139 4.7041 -5.0810 20 6 8.5312 3.7509 -4.1506 21 6 4.2604 2.5354 0.1235 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 1.6886 1.8464 0.8900 26 1 1.6887 1.8464 -0.8900 27 1 3.5273 1.5199 -2.1864 28 1 4.4862 0.0701 -1.6575 29 1 5.1089 3.7499 -2.0980 30 1 6.1736 6.6543 -4.8591 31 1 8.5754 6.3583 -7.3201 32 1 9.9372 8.1551 -6.5307 33 1 6.8492 8.7162 -5.1273 34 1 7.4046 9.1147 -7.4622 35 1 9.8617 4.6269 -5.5929 36 1 9.1778 2.9162 -3.9240 37 1 4.6941 2.7103 1.1081 38 1 3.6749 3.3810 -0.2373 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:18 Heat of formation + Delta-G solvation = -45.044483 kcal Electronic energy + Delta-G solvation = -20960.666600 eV Core-core repulsion = 17577.950410 eV Total energy + Delta-G solvation = -3382.716190 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.130 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.84455 -40.83829 -39.49115 -38.19195 -37.98556 -34.76800 -33.67265 -32.98339 -29.77434 -27.94017 -26.90704 -26.60323 -25.00563 -24.31205 -22.88921 -21.59736 -20.80597 -19.06920 -18.76932 -18.18159 -17.51819 -17.07164 -16.92020 -16.77847 -16.30621 -16.17893 -15.77468 -15.64397 -15.57005 -15.00105 -14.61608 -14.28324 -14.06958 -14.04458 -13.88166 -13.51621 -13.19689 -12.98513 -12.60410 -12.40570 -12.14119 -12.06823 -11.67951 -11.39167 -11.26422 -11.07618 -10.77056 -10.59341 -10.56382 -10.25243 -9.94342 -5.13307 -0.53103 0.09956 1.06181 1.43949 1.66722 1.80207 2.06144 2.67993 2.77196 2.96154 3.14242 3.45174 3.53169 3.57587 3.69868 3.75737 3.81807 3.88811 3.91654 4.20002 4.21791 4.28740 4.34738 4.42734 4.51439 4.54309 4.55977 4.65413 4.73733 4.76979 4.78952 4.90777 4.98936 5.02941 5.07226 5.28400 5.38387 5.57551 6.21673 6.22691 6.38159 6.67382 7.19296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.119 0.881 9 N -0.700 5.700 10 C 0.574 3.426 11 O -0.529 6.529 12 C 0.079 3.921 13 N -0.452 5.452 14 C 0.106 3.894 15 C -0.103 4.103 16 C -0.076 4.076 17 O -0.535 6.535 18 Si 0.682 3.318 19 C -0.052 4.052 20 C -0.108 4.108 21 C -0.137 4.137 22 H 0.041 0.959 23 H 0.087 0.913 24 H 0.041 0.959 25 H 0.051 0.949 26 H 0.051 0.949 27 H 0.086 0.914 28 H 0.077 0.923 29 H 0.412 0.588 30 H 0.164 0.836 31 H 0.085 0.915 32 H 0.384 0.616 33 H -0.250 1.250 34 H -0.255 1.255 35 H 0.146 0.854 36 H 0.153 0.847 37 H 0.081 0.919 38 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.376 3.125 -3.108 5.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.005 4.005 4 C -0.125 4.125 5 H 0.123 0.877 6 C -0.181 4.181 7 C 0.015 3.985 8 H 0.137 0.863 9 N -0.351 5.351 10 C 0.359 3.641 11 O -0.404 6.404 12 C -0.059 4.059 13 N -0.163 5.163 14 C -0.054 4.054 15 C -0.105 4.105 16 C -0.186 4.186 17 O -0.343 6.343 18 Si 0.582 3.418 19 C -0.078 4.078 20 C -0.128 4.128 21 C -0.176 4.176 22 H 0.060 0.940 23 H 0.105 0.895 24 H 0.060 0.940 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.105 0.895 28 H 0.096 0.904 29 H 0.249 0.751 30 H 0.181 0.819 31 H 0.102 0.898 32 H 0.233 0.767 33 H -0.174 1.174 34 H -0.180 1.180 35 H 0.164 0.836 36 H 0.171 0.829 37 H 0.100 0.900 38 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.830 2.724 -1.862 5.055 hybrid contribution 1.448 1.085 -0.815 1.984 sum -2.382 3.810 -2.677 5.230 Atomic orbital electron populations 1.22761 0.80839 1.02987 1.00007 1.87898 1.19800 1.27821 1.95404 1.22519 0.92800 0.84895 1.00254 1.22334 0.93139 0.98366 0.98704 0.87722 1.23530 0.97056 1.00875 0.96684 1.22600 0.96465 0.90137 0.89294 0.86285 1.45817 1.19456 1.28422 1.41379 1.17879 0.81612 0.84253 0.80371 1.90812 1.53628 1.32020 1.63969 1.21178 0.92720 0.94256 0.97728 1.67523 1.33096 1.01461 1.14265 1.22536 0.94451 0.96767 0.91616 1.20534 0.95881 0.96065 0.98050 1.24733 0.95848 1.00039 0.97964 1.86577 1.39598 1.54743 1.53341 0.95111 0.84574 0.80285 0.81836 1.21528 0.99224 0.91757 0.95298 1.22216 0.96160 0.99748 0.94716 1.23364 0.97040 0.97166 0.99992 0.94024 0.89482 0.94022 0.93046 0.93078 0.89509 0.90446 0.75145 0.81894 0.89760 0.76700 1.17395 1.18013 0.83579 0.82930 0.90033 0.89170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.84 10.70 -35.23 -0.38 -1.22 16 3 C 0.07 -0.01 5.78 37.16 0.21 0.20 16 4 C -0.11 0.05 4.01 -89.81 -0.36 -0.31 16 5 H 0.10 0.00 8.14 -51.93 -0.42 -0.42 16 6 C -0.14 -0.03 7.43 -25.92 -0.19 -0.22 16 7 C 0.12 0.04 4.24 -67.12 -0.28 -0.24 16 8 H 0.12 0.20 7.46 -51.93 -0.39 -0.18 16 9 N -0.70 -0.68 5.34 -53.86 -0.29 -0.97 16 10 C 0.57 1.97 7.81 -12.18 -0.10 1.88 16 11 O -0.53 -3.34 15.92 5.36 0.09 -3.26 16 12 C 0.08 0.20 6.75 -83.01 -0.56 -0.36 16 13 N -0.45 -0.70 9.54 -9.80 -0.09 -0.79 16 14 C 0.11 0.01 9.84 -17.57 -0.17 -0.16 16 15 C -0.10 0.00 5.44 -104.36 -0.57 -0.57 16 16 C -0.08 0.14 2.82 36.01 0.10 0.24 16 17 O -0.53 0.24 12.75 -35.23 -0.45 -0.21 16 18 Si 0.68 -1.74 29.82 -169.99 -5.07 -6.81 16 19 C -0.05 -0.02 9.76 -39.31 -0.38 -0.40 16 20 C -0.11 -0.17 9.63 -39.05 -0.38 -0.55 16 21 C -0.14 0.21 7.39 -25.92 -0.19 0.02 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 24 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.05 7.84 -51.93 -0.41 -0.45 16 27 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 28 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 29 H 0.41 -0.22 8.06 -40.82 -0.33 -0.55 16 30 H 0.16 -0.38 4.89 -52.49 -0.26 -0.64 16 31 H 0.08 -0.31 7.96 -51.92 -0.41 -0.72 16 32 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 33 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 34 H -0.26 0.12 7.11 56.52 0.40 0.52 16 35 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 36 H 0.15 0.17 7.64 -52.49 -0.40 -0.23 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.09 -0.23 8.08 -51.93 -0.42 -0.65 16 LS Contribution 323.84 15.07 4.88 4.88 Total: 0.00 -7.68 323.84 -8.27 -15.95 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -5.21 Total: -8.20 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -1.76 Total: 0.63 kcal Atomic # 7 Polarization: -1.38 SS G_CDS: -0.38 Total: -1.76 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -0.74 Total: -4.69 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.07 Total: -6.81 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -7.68 -8.27 -15.95 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.090 kcal (2) G-P(sol) polarization free energy of solvation -7.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.044 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds