Wall clock time and date at job start Sat Mar 6 2021 20:48:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42906 * 114.00217 * 2 1 4 4 C 1.53001 * 109.47074 * 180.02562 * 3 2 1 5 5 H 1.09003 * 112.84746 * 43.80548 * 4 3 2 6 6 C 1.53781 * 113.61341 * 174.99918 * 4 3 2 7 7 C 1.53781 * 87.08070 * 140.06609 * 6 4 3 8 8 H 1.09002 * 113.61445 * 89.11830 * 7 6 4 9 9 N 1.46497 * 113.61305 * 219.93536 * 7 6 4 10 10 C 1.34780 * 119.99653 * 203.46742 * 9 7 6 11 11 O 1.21577 * 120.00375 * 0.02562 * 10 9 7 12 12 C 1.47612 * 119.99490 * 179.97438 * 10 9 7 13 13 C 1.39705 * 120.09085 * 359.73069 * 12 10 9 14 14 C 1.37724 * 119.91199 * 179.71790 * 13 12 10 15 15 C 1.50700 * 119.95714 * 180.25571 * 14 13 12 16 16 C 1.38977 * 120.08915 * 0.57645 * 14 13 12 17 17 O 1.35702 * 119.91777 * 179.69773 * 16 14 13 18 18 C 1.39023 * 120.17210 * 359.67697 * 16 14 13 19 19 C 1.50702 * 119.95484 * 180.02562 * 18 16 14 20 20 O 1.42892 * 109.46977 * 75.02128 * 19 18 16 21 21 Si 1.86307 * 109.46868 * 195.02135 * 19 18 16 22 22 C 1.37684 * 120.08913 * 0.04424 * 18 16 14 23 23 C 1.53786 * 87.17350 * 334.52830 * 7 6 4 24 24 H 1.08996 * 109.47445 * 180.02562 * 1 2 3 25 25 H 1.09007 * 109.46823 * 300.00318 * 1 2 3 26 26 H 1.09003 * 109.47138 * 59.99371 * 1 2 3 27 27 H 1.09002 * 109.46916 * 60.00174 * 3 2 1 28 28 H 1.08998 * 109.46991 * 300.00269 * 3 2 1 29 29 H 1.08999 * 113.61181 * 25.51665 * 6 4 3 30 30 H 1.09000 * 113.69133 * 254.62492 * 6 4 3 31 31 H 0.96995 * 120.00146 * 23.47603 * 9 7 6 32 32 H 1.08004 * 120.04252 * 359.97438 * 13 12 10 33 33 H 1.09001 * 109.47011 * 270.31988 * 15 14 13 34 34 H 1.08995 * 109.47597 * 30.32044 * 15 14 13 35 35 H 1.09004 * 109.47333 * 150.32677 * 15 14 13 36 36 H 0.96695 * 114.00145 * 269.98155 * 17 16 14 37 37 H 1.09005 * 109.46756 * 315.01928 * 19 18 16 38 38 H 0.96698 * 114.00535 * 299.99534 * 20 19 18 39 39 H 1.48501 * 109.99635 * 59.99966 * 21 19 18 40 40 H 1.48500 * 109.99518 * 181.31323 * 21 19 18 41 41 H 1.08002 * 120.04356 * 179.97438 * 22 18 16 42 42 H 1.08992 * 113.61675 * 140.02412 * 23 7 6 43 43 H 1.09000 * 113.60973 * 270.92699 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.8998 0.4286 -0.6963 6 6 4.2604 2.5353 -0.1235 7 6 5.2692 1.9982 0.9054 8 1 6.1076 1.4647 0.4576 9 7 5.6914 2.9975 1.8900 10 6 6.8679 2.8556 2.5321 11 8 7.5790 1.8986 2.2939 12 6 7.2936 3.8628 3.5237 13 6 6.4811 4.9667 3.7939 14 6 6.8792 5.9012 4.7241 15 6 6.0008 7.0893 5.0205 16 6 8.0929 5.7534 5.3848 17 8 8.4845 6.6794 6.2961 18 6 8.9067 4.6591 5.1148 19 6 10.2215 4.5034 5.8346 20 8 9.9821 4.0754 7.1767 21 14 11.2646 3.2349 4.9549 22 6 8.5132 3.7175 4.1905 23 6 4.1483 1.0732 1.4083 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 1.6886 1.8464 0.8900 28 1 1.6886 1.8464 -0.8900 29 1 3.6745 3.3798 0.2391 30 1 4.6932 2.7120 -1.1082 31 1 5.1243 3.7611 2.0798 32 1 5.5401 5.0849 3.2771 33 1 6.2584 7.9082 4.3489 34 1 4.9562 6.8145 4.8744 35 1 6.1526 7.4048 6.0528 36 1 9.0016 7.4056 5.9217 37 1 10.7449 5.4595 5.8459 38 1 9.4440 4.6891 7.6952 39 1 11.5207 3.6684 3.5578 40 1 12.5511 3.0490 5.6729 41 1 9.1462 2.8679 3.9811 42 1 4.4903 0.0692 1.6591 43 1 3.5318 1.5189 2.1890 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:23 Heat of formation + Delta-G solvation = -108.380945 kcal Electronic energy + Delta-G solvation = -25216.325765 eV Core-core repulsion = 21422.069200 eV Total energy + Delta-G solvation = -3794.256565 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.82092 -40.95868 -39.67751 -38.24348 -37.72130 -37.53996 -34.77535 -34.03211 -31.86265 -29.64950 -28.16421 -27.11067 -26.84313 -26.68834 -25.14279 -23.04907 -22.20482 -21.51236 -20.65760 -19.63405 -18.75119 -18.08738 -17.85595 -17.42731 -17.00468 -16.86637 -16.80607 -16.18691 -15.99864 -15.73994 -15.67572 -15.28742 -14.96303 -14.67694 -14.49945 -14.07068 -14.02353 -13.80661 -13.59420 -13.49081 -13.23347 -13.12309 -13.05269 -12.82171 -12.44414 -12.25568 -12.11274 -11.94245 -11.74601 -11.44304 -11.24906 -11.17549 -10.88133 -10.62715 -10.12019 -10.00165 -9.73384 -4.80523 -0.45041 0.02853 1.39135 1.61855 1.71196 2.01231 2.03489 2.54954 2.73722 2.91203 3.33507 3.37935 3.48367 3.52152 3.60247 3.75668 3.82400 3.86090 3.92714 4.05269 4.20321 4.23405 4.28744 4.30392 4.37712 4.45870 4.46809 4.49194 4.53479 4.56043 4.58153 4.66387 4.75183 4.75538 4.92211 4.95197 5.02247 5.03211 5.05986 5.18174 5.21801 5.42988 5.52092 6.17195 6.36716 6.41373 6.57286 7.15445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.138 4.138 7 C 0.123 3.877 8 H 0.120 0.880 9 N -0.716 5.716 10 C 0.561 3.439 11 O -0.528 6.528 12 C -0.134 4.134 13 C -0.069 4.069 14 C -0.113 4.113 15 C -0.115 4.115 16 C 0.142 3.858 17 O -0.492 6.492 18 C -0.143 4.143 19 C -0.070 4.070 20 O -0.532 6.532 21 Si 0.738 3.262 22 C -0.040 4.040 23 C -0.144 4.144 24 H 0.087 0.913 25 H 0.041 0.959 26 H 0.041 0.959 27 H 0.050 0.950 28 H 0.051 0.949 29 H 0.088 0.912 30 H 0.081 0.919 31 H 0.400 0.600 32 H 0.132 0.868 33 H 0.073 0.927 34 H 0.071 0.929 35 H 0.077 0.923 36 H 0.396 0.604 37 H 0.072 0.928 38 H 0.369 0.631 39 H -0.249 1.249 40 H -0.251 1.251 41 H 0.147 0.853 42 H 0.078 0.922 43 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.733 5.064 -1.761 7.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.005 4.005 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.176 4.176 7 C 0.018 3.982 8 H 0.138 0.862 9 N -0.368 5.368 10 C 0.349 3.651 11 O -0.405 6.405 12 C -0.138 4.138 13 C -0.088 4.088 14 C -0.113 4.113 15 C -0.171 4.171 16 C 0.096 3.904 17 O -0.303 6.303 18 C -0.144 4.144 19 C -0.178 4.178 20 O -0.338 6.338 21 Si 0.636 3.364 22 C -0.058 4.058 23 C -0.182 4.182 24 H 0.106 0.894 25 H 0.059 0.941 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.106 0.894 30 H 0.100 0.900 31 H 0.235 0.765 32 H 0.150 0.850 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.096 0.904 36 H 0.253 0.747 37 H 0.089 0.911 38 H 0.217 0.783 39 H -0.173 1.173 40 H -0.176 1.176 41 H 0.164 0.836 42 H 0.097 0.903 43 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -3.288 3.201 -2.146 5.066 hybrid contribution -0.807 2.671 0.297 2.806 sum -4.095 5.872 -1.849 7.394 Atomic orbital electron populations 1.22763 0.80806 1.03041 0.99986 1.87902 1.19820 1.27749 1.95394 1.22511 0.92813 0.84957 1.00172 1.22382 0.93107 0.98309 0.98764 0.87679 1.23358 0.97042 0.97138 1.00077 1.22560 0.96405 0.90060 0.89155 0.86223 1.45890 1.21099 1.27553 1.42217 1.18155 0.81104 0.85282 0.80587 1.90815 1.53499 1.31572 1.64584 1.19882 0.96741 0.96743 1.00388 1.21092 0.98887 0.92496 0.96316 1.20167 0.96091 0.98446 0.96630 1.20738 0.98375 0.94790 1.03209 1.18326 0.92389 0.90017 0.89634 1.84706 1.74641 1.37016 1.33970 1.20647 0.98371 0.96341 0.99003 1.25313 0.97490 1.07728 0.87307 1.86747 1.75226 1.50468 1.21366 0.92519 0.78631 0.87994 0.77254 1.20944 0.94761 0.97184 0.92958 1.23578 0.97034 1.01053 0.96558 0.89432 0.94053 0.94009 0.93179 0.93064 0.89386 0.89989 0.76466 0.84989 0.90866 0.90990 0.90394 0.74673 0.91067 0.78251 1.17321 1.17597 0.83599 0.90336 0.89644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.67 10.70 -35.23 -0.38 -1.04 16 3 C 0.07 -0.06 5.78 37.16 0.21 0.16 16 4 C -0.11 0.13 4.01 -89.67 -0.36 -0.23 16 5 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 7 C 0.12 -0.09 4.21 -67.12 -0.28 -0.37 16 8 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 9 N -0.72 0.64 5.31 -54.03 -0.29 0.36 16 10 C 0.56 1.17 7.76 -12.43 -0.10 1.08 16 11 O -0.53 -2.97 15.96 5.30 0.08 -2.88 16 12 C -0.13 -0.13 5.88 -104.96 -0.62 -0.75 16 13 C -0.07 0.08 9.18 -39.22 -0.36 -0.28 16 14 C -0.11 0.10 5.89 -104.54 -0.62 -0.51 16 15 C -0.11 0.31 9.78 36.01 0.35 0.67 16 16 C 0.14 -0.01 6.62 -39.02 -0.26 -0.27 16 17 O -0.49 0.78 11.41 -18.81 -0.21 0.56 16 18 C -0.14 -0.14 5.27 -104.53 -0.55 -0.69 16 19 C -0.07 -0.07 2.33 36.01 0.08 0.01 16 20 O -0.53 -1.14 12.65 -35.23 -0.45 -1.59 16 21 Si 0.74 0.96 30.17 -169.99 -5.13 -4.17 16 22 C -0.04 -0.07 8.20 -39.22 -0.32 -0.39 16 23 C -0.14 0.08 7.45 -25.77 -0.19 -0.11 16 24 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.05 -0.08 7.86 -51.93 -0.41 -0.49 16 28 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.09 -0.35 8.07 -51.93 -0.42 -0.77 16 30 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.40 -1.46 6.73 -40.82 -0.27 -1.73 16 32 H 0.13 -0.55 6.39 -52.48 -0.34 -0.88 16 33 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 35 H 0.08 -0.16 7.52 -51.93 -0.39 -0.55 16 36 H 0.40 -2.15 9.06 45.56 0.41 -1.74 16 37 H 0.07 -0.02 7.82 -51.93 -0.41 -0.42 16 38 H 0.37 0.04 8.60 45.56 0.39 0.43 16 39 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 40 H -0.25 -0.94 7.11 56.52 0.40 -0.53 16 41 H 0.15 0.23 4.70 -52.49 -0.25 -0.01 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.09 -0.09 7.91 -51.93 -0.41 -0.50 16 LS Contribution 356.56 15.07 5.37 5.37 Total: 0.00 -7.89 356.56 -8.55 -16.44 By element: Atomic # 1 Polarization: -7.15 SS G_CDS: -5.48 Total: -12.63 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -2.08 Total: -0.42 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.29 Total: 0.36 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -0.95 Total: -4.95 kcal Atomic # 14 Polarization: 0.96 SS G_CDS: -5.13 Total: -4.17 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -7.89 -8.55 -16.44 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.938 kcal (2) G-P(sol) polarization free energy of solvation -7.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.829 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds