Wall clock time and date at job start Sat Mar 6 2021 20:48:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42904 * 113.99839 * 2 1 4 4 C 1.53007 * 109.46885 * 179.97438 * 3 2 1 5 5 H 1.08994 * 112.85179 * 43.80105 * 4 3 2 6 6 C 1.53782 * 113.61178 * 175.00158 * 4 3 2 7 7 C 1.53781 * 87.08135 * 139.97838 * 6 4 3 8 8 H 1.08999 * 113.61362 * 89.20016 * 7 6 4 9 9 N 1.46500 * 113.61312 * 220.01619 * 7 6 4 10 10 C 1.34777 * 119.99554 * 205.00158 * 9 7 6 11 11 O 1.21281 * 120.00393 * 0.02562 * 10 9 7 12 12 C 1.50701 * 119.99624 * 180.02562 * 10 9 7 13 13 C 1.50708 * 109.46959 * 179.97438 * 12 10 9 14 14 C 1.38278 * 119.93266 * 269.71987 * 13 12 10 15 15 C 1.38119 * 120.06250 * 179.76471 * 14 13 12 16 16 C 1.38828 * 119.93326 * 0.53926 * 15 14 13 17 17 N 1.40206 * 120.06136 * 179.69911 * 16 15 14 18 18 C 1.36569 * 125.66431 * 236.10702 * 17 16 15 19 19 C 1.34851 * 108.19568 * 180.02562 * 18 17 16 20 20 C 1.40938 * 107.47135 * 359.97438 * 19 18 17 21 21 C 1.34853 * 107.46700 * 359.73678 * 20 19 18 22 22 C 1.50699 * 125.90102 * 180.25374 * 21 20 19 23 23 O 1.42901 * 109.47019 * 218.42290 * 22 21 20 24 24 Si 1.86299 * 109.47155 * 338.42085 * 22 21 20 25 25 C 1.38821 * 119.86898 * 359.71800 * 16 15 14 26 26 C 1.38119 * 119.93646 * 359.97438 * 25 16 15 27 27 C 1.53782 * 87.08092 * 334.56624 * 7 6 4 28 28 H 1.09004 * 109.47177 * 60.00523 * 1 2 3 29 29 H 1.09003 * 109.47288 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47612 * 300.00199 * 1 2 3 31 31 H 1.08993 * 109.47120 * 299.99254 * 3 2 1 32 32 H 1.08997 * 109.47070 * 59.99634 * 3 2 1 33 33 H 1.09005 * 113.61120 * 254.53053 * 6 4 3 34 34 H 1.08999 * 113.61317 * 25.42756 * 6 4 3 35 35 H 0.96998 * 119.99855 * 25.00222 * 9 7 6 36 36 H 1.08998 * 109.47347 * 299.99836 * 12 10 9 37 37 H 1.08995 * 109.47318 * 59.99960 * 12 10 9 38 38 H 1.07999 * 119.96578 * 0.02646 * 14 13 12 39 39 H 1.07999 * 120.02864 * 180.25640 * 15 14 13 40 40 H 1.07993 * 125.90068 * 0.02562 * 18 17 16 41 41 H 1.08002 * 126.26213 * 180.02562 * 19 18 17 42 42 H 1.08003 * 126.27048 * 179.97438 * 20 19 18 43 43 H 1.08992 * 109.47356 * 98.42087 * 22 21 20 44 44 H 0.96700 * 114.00093 * 65.22769 * 23 22 21 45 45 H 1.48503 * 109.99903 * 58.68041 * 24 22 21 46 46 H 1.48506 * 109.99998 * 179.97438 * 24 22 21 47 47 H 1.08001 * 120.03267 * 180.02562 * 25 16 15 48 48 H 1.07995 * 119.96988 * 179.97438 * 26 25 16 49 49 H 1.09002 * 113.61107 * 270.88073 * 27 7 6 50 50 H 1.08998 * 113.61387 * 139.98254 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.9004 0.4285 -0.6943 6 6 4.2604 2.5353 -0.1221 7 6 5.2671 1.9996 0.9096 8 1 6.1072 1.4670 0.4640 9 7 5.6856 2.9995 1.8952 10 6 6.8745 2.8754 2.5178 11 8 7.5980 1.9364 2.2618 12 6 7.3047 3.9037 3.5320 13 6 8.6609 3.5354 4.0764 14 6 8.7595 2.7329 5.1981 15 6 10.0011 2.3897 5.6965 16 6 11.1506 2.8606 5.0766 17 7 12.4123 2.5191 5.5840 18 6 13.3836 3.4012 5.9627 19 6 14.4483 2.6953 6.3946 20 6 14.1246 1.3284 6.2797 21 6 12.8717 1.2492 5.7873 22 6 12.1116 -0.0212 5.5056 23 8 11.3529 0.1340 4.3047 24 14 13.3122 -1.4314 5.3038 25 6 11.0484 3.6705 3.9538 26 6 9.8041 4.0051 3.4562 27 6 4.1440 1.0751 1.4087 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 1.6886 1.8463 -0.8900 32 1 1.6884 1.8464 0.8899 33 1 4.6949 2.7098 -1.1064 34 1 3.6735 3.3802 0.2384 35 1 5.1070 3.7507 2.0996 36 1 7.3574 4.8831 3.0566 37 1 6.5823 3.9341 4.3476 38 1 7.8648 2.3706 5.6825 39 1 10.0774 1.7595 6.5702 40 1 13.3114 4.4780 5.9232 41 1 15.3785 3.1029 6.7621 42 1 14.7617 0.4967 6.5419 43 1 11.4382 -0.2335 6.3360 44 1 11.8926 0.2457 3.5101 45 1 14.1294 -1.5828 6.5345 46 1 12.5750 -2.6903 5.0262 47 1 11.9409 4.0379 3.4693 48 1 9.7239 4.6354 2.5830 49 1 3.5255 1.5208 2.1877 50 1 4.4847 0.0708 1.6602 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:25 Heat of formation + Delta-G solvation = 0.786386 kcal Electronic energy + Delta-G solvation = -30973.182844 eV Core-core repulsion = 26741.162751 eV Total energy + Delta-G solvation = -4232.020093 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -42.69165 -41.32455 -40.24851 -39.34036 -38.18124 -37.72724 -34.86194 -34.55519 -32.15727 -31.82873 -31.06253 -29.70332 -27.87689 -26.88585 -26.56137 -26.06962 -24.01444 -23.96736 -22.78679 -21.53730 -21.44929 -20.68178 -20.52101 -19.26281 -18.03466 -17.80909 -17.44363 -17.23808 -17.07365 -16.84209 -16.54620 -16.22053 -15.96082 -15.81676 -15.66903 -15.59051 -15.37574 -14.79022 -14.67891 -14.50382 -14.42522 -14.22768 -14.03414 -13.91986 -13.45316 -13.38779 -13.26327 -13.19272 -13.09388 -12.84678 -12.63500 -12.37583 -12.18820 -12.05685 -12.04551 -11.95742 -11.64753 -11.40481 -10.95591 -10.75651 -10.60268 -10.24082 -10.01387 -9.98946 -9.23442 -9.09745 -5.00340 0.01099 0.34558 1.06210 1.31420 1.61209 1.64919 1.82849 1.96476 2.08268 2.17992 2.70511 2.84283 3.37099 3.47147 3.60957 3.62062 3.66542 3.75100 3.81792 3.87996 3.90466 4.02177 4.13585 4.24056 4.31798 4.32657 4.37726 4.38149 4.47612 4.49017 4.51570 4.54650 4.59158 4.61061 4.63677 4.71163 4.78206 4.81661 4.84068 4.85125 4.95981 5.01224 5.07166 5.18995 5.20483 5.22900 5.29557 5.35256 5.50104 5.60292 5.79393 5.92466 6.16945 6.23449 6.49656 6.59072 6.59582 7.30928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.421 6.421 3 C 0.070 3.930 4 C -0.109 4.109 5 H 0.089 0.911 6 C -0.118 4.118 7 C 0.119 3.881 8 H 0.090 0.910 9 N -0.708 5.708 10 C 0.511 3.489 11 O -0.578 6.578 12 C -0.098 4.098 13 C -0.066 4.066 14 C -0.100 4.100 15 C -0.110 4.110 16 C 0.118 3.882 17 N -0.395 5.395 18 C -0.014 4.014 19 C -0.200 4.200 20 C -0.203 4.203 21 C -0.021 4.021 22 C -0.058 4.058 23 O -0.549 6.549 24 Si 0.806 3.194 25 C -0.119 4.119 26 C -0.095 4.095 27 C -0.144 4.144 28 H 0.050 0.950 29 H 0.089 0.911 30 H 0.050 0.950 31 H 0.062 0.938 32 H 0.062 0.938 33 H 0.085 0.915 34 H 0.112 0.888 35 H 0.419 0.581 36 H 0.137 0.863 37 H 0.130 0.870 38 H 0.135 0.865 39 H 0.111 0.889 40 H 0.181 0.819 41 H 0.156 0.844 42 H 0.151 0.849 43 H 0.098 0.902 44 H 0.387 0.613 45 H -0.276 1.276 46 H -0.294 1.294 47 H 0.137 0.863 48 H 0.148 0.852 49 H 0.095 0.905 50 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.212 7.336 -2.543 8.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.341 6.341 3 C -0.006 4.006 4 C -0.128 4.128 5 H 0.108 0.892 6 C -0.156 4.156 7 C 0.014 3.986 8 H 0.108 0.892 9 N -0.360 5.360 10 C 0.299 3.701 11 O -0.457 6.457 12 C -0.137 4.137 13 C -0.067 4.067 14 C -0.119 4.119 15 C -0.130 4.130 16 C 0.029 3.971 17 N -0.068 5.068 18 C -0.141 4.141 19 C -0.224 4.224 20 C -0.227 4.227 21 C -0.131 4.131 22 C -0.167 4.167 23 O -0.355 6.355 24 Si 0.709 3.291 25 C -0.138 4.138 26 C -0.113 4.113 27 C -0.183 4.183 28 H 0.069 0.931 29 H 0.107 0.893 30 H 0.069 0.931 31 H 0.080 0.920 32 H 0.080 0.920 33 H 0.103 0.897 34 H 0.131 0.869 35 H 0.256 0.744 36 H 0.155 0.845 37 H 0.148 0.852 38 H 0.153 0.847 39 H 0.129 0.871 40 H 0.198 0.802 41 H 0.174 0.826 42 H 0.168 0.832 43 H 0.116 0.884 44 H 0.235 0.765 45 H -0.202 1.202 46 H -0.221 1.221 47 H 0.155 0.845 48 H 0.166 0.834 49 H 0.114 0.886 50 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -4.126 5.777 -2.133 7.413 hybrid contribution -0.749 0.372 0.706 1.094 sum -4.875 6.149 -1.427 7.976 Atomic orbital electron populations 1.22884 0.79770 1.03527 1.00864 1.87863 1.21186 1.29418 1.95606 1.22638 0.92537 0.84233 1.01219 1.22314 0.93382 0.99208 0.97908 0.89241 1.23285 0.95933 0.96743 0.99666 1.22362 0.95579 0.90590 0.90086 0.89163 1.45880 1.19717 1.28583 1.41865 1.21075 0.80946 0.86407 0.81722 1.90768 1.54559 1.35015 1.65391 1.20775 0.94584 0.99450 0.98885 1.19582 0.95176 0.97111 0.94824 1.21019 0.96999 0.97234 0.96618 1.20926 0.92011 1.00204 0.99827 1.17724 0.83117 1.00638 0.95657 1.41563 1.10902 1.05767 1.48590 1.22373 0.89047 0.96507 1.06211 1.21185 1.00033 0.93032 1.08130 1.20982 0.95288 0.98249 1.08192 1.21216 0.96238 0.86016 1.09629 1.25033 1.01532 1.00603 0.89487 1.86543 1.36619 1.95768 1.16536 0.93021 0.78496 0.71757 0.85801 1.21151 0.99264 0.99067 0.94314 1.21118 0.90878 0.99769 0.99551 1.23523 0.97564 0.99844 0.97326 0.93097 0.89288 0.93149 0.92011 0.91962 0.89682 0.86945 0.74355 0.84480 0.85236 0.84725 0.87126 0.80196 0.82604 0.83163 0.88419 0.76473 1.20171 1.22111 0.84507 0.83399 0.88629 0.93060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 113.37 1.25 1.21 16 2 O -0.42 -1.77 10.70 -148.98 -1.59 -3.37 16 3 C 0.07 -0.12 5.78 71.98 0.42 0.30 16 4 C -0.11 0.17 4.01 -10.26 -0.04 0.13 16 5 H 0.09 0.11 8.14 -2.39 -0.02 0.09 16 6 C -0.12 0.71 7.39 31.12 0.23 0.94 16 7 C 0.12 -0.12 4.24 45.52 0.19 0.07 16 8 H 0.09 0.44 7.46 -2.39 -0.02 0.42 16 9 N -0.71 2.94 5.35 -440.03 -2.36 0.58 16 10 C 0.51 0.73 7.82 87.66 0.69 1.42 16 11 O -0.58 -7.30 15.63 -3.03 -0.05 -7.35 16 12 C -0.10 0.52 5.83 29.10 0.17 0.69 16 13 C -0.07 -0.10 4.38 -19.84 -0.09 -0.19 16 14 C -0.10 -0.44 9.69 22.25 0.22 -0.23 16 15 C -0.11 -0.81 8.55 22.38 0.19 -0.62 16 16 C 0.12 0.79 4.69 38.08 0.18 0.97 16 17 N -0.40 -2.74 2.84 -333.41 -0.95 -3.69 16 18 C -0.01 -0.07 11.21 83.18 0.93 0.87 16 19 C -0.20 -0.94 10.86 22.15 0.24 -0.70 16 20 C -0.20 -1.15 9.39 22.15 0.21 -0.95 16 21 C -0.02 -0.14 6.12 41.04 0.25 0.11 16 22 C -0.06 -0.31 2.48 71.24 0.18 -0.14 16 23 O -0.55 -4.03 10.98 -148.98 -1.64 -5.66 16 24 Si 0.81 1.37 30.93 68.60 2.12 3.49 16 25 C -0.12 -0.43 9.77 22.38 0.22 -0.21 16 26 C -0.09 -0.14 9.69 22.25 0.22 0.08 16 27 C -0.14 0.01 7.43 31.12 0.23 0.24 16 28 H 0.05 -0.17 8.14 -2.38 -0.02 -0.19 16 29 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.06 -0.27 7.84 -2.39 -0.02 -0.29 16 33 H 0.08 -0.53 8.14 -2.38 -0.02 -0.55 16 34 H 0.11 -1.19 8.08 -2.39 -0.02 -1.21 16 35 H 0.42 -4.81 8.73 -92.71 -0.81 -5.62 16 36 H 0.14 -1.57 8.08 -2.39 -0.02 -1.59 16 37 H 0.13 -1.30 8.08 -2.39 -0.02 -1.32 16 38 H 0.13 0.19 8.06 -2.91 -0.02 0.17 16 39 H 0.11 0.93 8.06 -2.91 -0.02 0.91 16 40 H 0.18 0.01 8.06 -2.91 -0.02 -0.02 16 41 H 0.16 0.13 8.06 -2.91 -0.02 0.11 16 42 H 0.15 0.46 6.43 -2.91 -0.02 0.44 16 43 H 0.10 0.69 7.96 -2.39 -0.02 0.67 16 44 H 0.39 0.51 8.60 -74.06 -0.64 -0.12 16 45 H -0.28 -1.42 6.87 99.48 0.68 -0.74 16 46 H -0.29 -2.38 7.11 99.48 0.71 -1.68 16 47 H 0.14 0.14 8.06 -2.91 -0.02 0.12 16 48 H 0.15 -0.49 8.06 -2.91 -0.02 -0.51 16 49 H 0.10 -0.23 7.90 -2.39 -0.02 -0.24 16 50 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 Total: 0.00 -24.54 415.26 0.93 -23.61 By element: Atomic # 1 Polarization: -11.11 SS G_CDS: -0.48 Total: -11.59 kcal Atomic # 6 Polarization: -1.89 SS G_CDS: 5.87 Total: 3.98 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: -3.30 Total: -3.10 kcal Atomic # 8 Polarization: -13.10 SS G_CDS: -3.28 Total: -16.38 kcal Atomic # 14 Polarization: 1.37 SS G_CDS: 2.12 Total: 3.49 kcal Total: -24.54 0.93 -23.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.393 kcal (2) G-P(sol) polarization free energy of solvation -24.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.606 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds