Wall clock time and date at job start Sat Mar 6 2021 20:48:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42903 * 113.99629 * 2 1 4 4 C 1.53000 * 109.46726 * 180.02562 * 3 2 1 5 5 H 1.09000 * 112.85142 * 314.66284 * 4 3 2 6 6 C 1.53778 * 113.61854 * 85.86305 * 4 3 2 7 7 C 1.53950 * 87.02008 * 139.94859 * 6 4 3 8 8 H 1.08998 * 113.53938 * 89.19387 * 7 6 4 9 9 N 1.46502 * 113.66844 * 220.06759 * 7 6 4 10 10 C 1.34783 * 120.00132 * 252.56494 * 9 7 6 11 11 O 1.21593 * 119.99907 * 359.97438 * 10 9 7 12 12 C 1.47552 * 119.99838 * 179.97438 * 10 9 7 13 13 C 1.39826 * 120.00625 * 359.72405 * 12 10 9 14 14 C 1.36561 * 120.00281 * 179.78340 * 13 12 10 15 15 C 1.39818 * 120.00144 * 0.49153 * 14 13 12 16 16 C 1.47561 * 120.00357 * 179.71510 * 15 14 13 17 17 C 1.34979 * 125.27411 * 359.74620 * 16 15 14 18 18 C 1.37802 * 114.70034 * 179.78965 * 17 16 15 19 19 C 1.33740 * 115.07791 * 0.50076 * 18 17 16 20 20 C 1.50700 * 125.11522 * 179.75724 * 19 18 17 21 21 O 1.42902 * 109.47034 * 299.99071 * 20 19 18 22 22 Si 1.86301 * 109.47143 * 179.97438 * 20 19 18 23 23 S 1.75858 * 109.76496 * 359.72563 * 19 18 17 24 24 C 1.39827 * 119.99965 * 359.73812 * 15 14 13 25 25 C 1.36561 * 119.99970 * 0.02707 * 24 15 14 26 26 C 1.53777 * 87.11423 * 334.63767 * 7 6 4 27 27 H 1.09007 * 109.47484 * 299.99646 * 1 2 3 28 28 H 1.09004 * 109.47459 * 59.99983 * 1 2 3 29 29 H 1.09000 * 109.47196 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47382 * 59.99956 * 3 2 1 31 31 H 1.09001 * 109.46938 * 299.99942 * 3 2 1 32 32 H 1.09003 * 113.61363 * 254.53223 * 6 4 3 33 33 H 1.09005 * 113.61131 * 25.42909 * 6 4 3 34 34 H 0.97001 * 119.99966 * 72.56009 * 9 7 6 35 35 H 1.08008 * 119.99698 * 359.97438 * 13 12 10 36 36 H 1.08006 * 119.99961 * 180.20417 * 14 13 12 37 37 H 1.08001 * 122.64944 * 359.97438 * 17 16 15 38 38 H 1.07998 * 122.45745 * 180.23416 * 18 17 16 39 39 H 1.08991 * 109.47639 * 59.99357 * 20 19 18 40 40 H 0.96701 * 114.00166 * 300.01274 * 21 20 19 41 41 H 1.48493 * 110.00210 * 179.97438 * 22 20 19 42 42 H 1.48503 * 109.99741 * 301.31289 * 22 20 19 43 43 H 1.07999 * 119.99746 * 180.02562 * 24 15 14 44 44 H 1.07999 * 119.99858 * 179.97438 * 25 24 15 45 45 H 1.09001 * 113.61353 * 270.81253 * 26 7 6 46 46 H 1.08998 * 113.69291 * 139.91770 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9019 0.4473 0.7135 6 6 4.1409 1.0350 -1.4062 7 6 5.2651 1.9751 -0.9345 8 1 6.1055 1.4533 -0.4767 9 7 5.6816 2.9484 -1.9472 10 6 6.8692 2.8078 -2.5688 11 8 7.5951 1.8734 -2.2888 12 6 7.2883 3.7878 -3.5892 13 6 6.4510 4.8590 -3.9154 14 6 6.8410 5.7685 -4.8566 15 6 8.0730 5.6227 -5.5015 16 6 8.4915 6.6018 -6.5230 17 6 7.7698 7.6712 -6.9197 18 6 8.3724 8.4459 -7.8870 19 6 9.5723 8.0156 -8.2917 20 6 10.4254 8.6845 -9.3385 21 8 9.7140 8.7264 -10.5772 22 14 12.0045 7.7214 -9.5611 23 16 10.0051 6.5522 -7.4177 24 6 8.9082 4.5487 -5.1788 25 6 8.5204 3.6420 -4.2341 26 6 4.2605 2.5382 0.0846 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.6885 1.8465 0.8900 31 1 1.6885 1.8464 -0.8900 32 1 4.4810 0.0238 -1.6297 33 1 3.5205 1.4582 -2.1963 34 1 5.1026 3.6939 -2.1704 35 1 5.4972 4.9690 -3.4208 36 1 6.1956 6.5978 -5.1062 37 1 6.7982 7.9032 -6.5092 38 1 7.9079 9.3329 -8.2917 39 1 10.6613 9.7000 -9.0205 40 1 9.4708 7.8558 -10.9207 41 1 12.8544 8.3705 -10.5913 42 1 12.7380 7.6439 -8.2722 43 1 9.8600 4.4364 -5.6766 44 1 9.1654 2.8123 -3.9852 45 1 3.6729 3.3731 -0.2971 46 1 4.6958 2.7394 1.0634 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:35 Heat of formation + Delta-G solvation = -26.107218 kcal Electronic energy + Delta-G solvation = -27639.901217 eV Core-core repulsion = 23588.604566 eV Total energy + Delta-G solvation = -4051.296651 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.53574 -40.50667 -39.57339 -38.95997 -38.15316 -37.40622 -34.81191 -33.41355 -32.28808 -30.60959 -29.62706 -27.43293 -26.93057 -26.64135 -24.95415 -24.10106 -23.67072 -22.92518 -21.57463 -20.79138 -20.29995 -19.18079 -18.56247 -17.83254 -17.55588 -17.23087 -16.87828 -16.69463 -16.35135 -16.25317 -16.14921 -16.11129 -15.79591 -15.49089 -15.42146 -14.94426 -14.56036 -14.51112 -14.27122 -14.03159 -13.93544 -13.65476 -13.58782 -13.35362 -13.26285 -13.12755 -13.00356 -12.60106 -12.44023 -12.25255 -12.13549 -12.10095 -11.73544 -11.61632 -11.44148 -10.91014 -10.82478 -10.62932 -10.56625 -10.23809 -10.05367 -9.59376 -9.06446 -5.20800 -0.91362 0.23083 0.29915 0.34086 0.71348 1.17172 1.50589 1.57763 1.84784 1.99387 2.07721 2.73067 2.82517 3.29842 3.35745 3.40817 3.52309 3.59582 3.64720 3.70679 3.76584 3.78077 3.83534 4.12889 4.22321 4.25689 4.28535 4.29969 4.37830 4.39658 4.46448 4.48062 4.49324 4.55608 4.57994 4.67312 4.75107 4.75412 4.84633 4.94102 4.96345 5.02821 5.05332 5.19316 5.21305 5.23479 5.27329 5.41798 5.51141 5.69078 6.16999 6.41168 6.44393 7.18642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.143 4.143 7 C 0.122 3.878 8 H 0.119 0.881 9 N -0.717 5.717 10 C 0.560 3.440 11 O -0.533 6.533 12 C -0.136 4.136 13 C -0.078 4.078 14 C -0.110 4.110 15 C 0.013 3.987 16 C -0.147 4.147 17 C -0.120 4.120 18 C -0.103 4.103 19 C -0.219 4.219 20 C -0.026 4.026 21 O -0.534 6.534 22 Si 0.651 3.349 23 S 0.133 5.867 24 C -0.120 4.120 25 C -0.049 4.049 26 C -0.138 4.138 27 H 0.041 0.959 28 H 0.041 0.959 29 H 0.087 0.913 30 H 0.051 0.949 31 H 0.050 0.950 32 H 0.077 0.923 33 H 0.085 0.915 34 H 0.400 0.600 35 H 0.130 0.870 36 H 0.134 0.866 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.124 0.876 40 H 0.381 0.619 41 H -0.232 1.232 42 H -0.237 1.237 43 H 0.131 0.869 44 H 0.142 0.858 45 H 0.088 0.912 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.100 1.997 -0.507 4.588 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.182 4.182 7 C 0.018 3.982 8 H 0.137 0.863 9 N -0.368 5.368 10 C 0.348 3.652 11 O -0.410 6.410 12 C -0.140 4.140 13 C -0.097 4.097 14 C -0.130 4.130 15 C 0.010 3.990 16 C -0.264 4.264 17 C -0.150 4.150 18 C -0.134 4.134 19 C -0.337 4.337 20 C -0.139 4.139 21 O -0.340 6.340 22 Si 0.551 3.449 23 S 0.400 5.600 24 C -0.139 4.139 25 C -0.068 4.068 26 C -0.176 4.176 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.106 0.894 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.096 0.904 33 H 0.104 0.896 34 H 0.236 0.764 35 H 0.147 0.853 36 H 0.152 0.848 37 H 0.162 0.838 38 H 0.163 0.837 39 H 0.141 0.859 40 H 0.229 0.771 41 H -0.155 1.155 42 H -0.161 1.161 43 H 0.149 0.851 44 H 0.160 0.840 45 H 0.106 0.894 46 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.195 0.853 -0.220 1.485 hybrid contribution -2.217 2.057 0.201 3.031 sum -3.412 2.911 -0.020 4.485 Atomic orbital electron populations 1.22766 0.80793 1.03042 1.00002 1.87901 1.19836 1.27770 1.95398 1.22512 0.92807 0.84939 1.00190 1.22338 0.93143 0.98279 0.98841 0.87723 1.23554 0.97078 1.00941 0.96636 1.22575 0.96452 0.90419 0.88777 0.86270 1.45897 1.19968 1.29842 1.41062 1.18250 0.81124 0.84853 0.80986 1.90809 1.53158 1.32550 1.64458 1.20027 0.96868 0.97175 0.99902 1.20951 0.98813 0.93272 0.96681 1.20864 0.95615 0.99846 0.96645 1.18295 0.94279 0.92848 0.93534 1.23081 0.99110 1.00769 1.03479 1.20390 1.01397 0.94537 0.98699 1.20000 0.94519 1.01460 0.97381 1.25092 1.01451 1.01138 1.06006 1.24408 1.02118 1.04516 0.82903 1.86526 1.77606 1.34575 1.35260 0.94997 0.77406 0.88698 0.83824 1.84156 1.18112 1.23602 1.34127 1.20980 0.99859 0.94315 0.98703 1.20955 0.94638 0.98140 0.93024 1.23360 0.97085 0.97024 1.00149 0.93997 0.94036 0.89434 0.93039 0.93182 0.90422 0.89648 0.76421 0.85266 0.84833 0.83763 0.83660 0.85895 0.77113 1.15517 1.16121 0.85136 0.84032 0.89360 0.89994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.72 10.70 -35.23 -0.38 -1.10 16 3 C 0.07 -0.04 5.76 37.16 0.21 0.17 16 4 C -0.11 0.10 4.00 -89.81 -0.36 -0.26 16 5 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 6 C -0.14 0.05 7.45 -25.83 -0.19 -0.14 16 7 C 0.12 -0.05 4.24 -67.03 -0.28 -0.33 16 8 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 9 N -0.72 0.42 5.31 -53.96 -0.29 0.13 16 10 C 0.56 1.33 7.76 -12.46 -0.10 1.23 16 11 O -0.53 -3.30 15.93 5.28 0.08 -3.22 16 12 C -0.14 -0.13 5.88 -104.91 -0.62 -0.75 16 13 C -0.08 0.10 9.48 -39.59 -0.38 -0.27 16 14 C -0.11 0.12 9.48 -39.60 -0.38 -0.26 16 15 C 0.01 0.00 5.88 -104.91 -0.62 -0.61 16 16 C -0.15 -0.04 6.37 -36.94 -0.24 -0.27 16 17 C -0.12 0.05 9.64 -40.90 -0.39 -0.34 16 18 C -0.10 0.02 10.00 -41.32 -0.41 -0.39 16 19 C -0.22 0.04 5.73 -35.89 -0.21 -0.16 16 20 C -0.03 0.02 2.96 36.01 0.11 0.12 16 21 O -0.53 0.17 12.86 -35.23 -0.45 -0.28 16 22 Si 0.65 -0.68 30.96 -169.99 -5.26 -5.94 16 23 S 0.13 -0.03 19.46 -107.50 -2.09 -2.12 16 24 C -0.12 -0.06 9.54 -39.59 -0.38 -0.44 16 25 C -0.05 -0.06 9.53 -39.59 -0.38 -0.44 16 26 C -0.14 0.33 7.40 -25.92 -0.19 0.13 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.05 -0.08 7.87 -51.93 -0.41 -0.48 16 32 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 33 H 0.08 -0.07 7.92 -51.93 -0.41 -0.48 16 34 H 0.40 -1.35 6.74 -40.82 -0.28 -1.63 16 35 H 0.13 -0.56 6.38 -52.48 -0.34 -0.89 16 36 H 0.13 -0.42 6.74 -52.48 -0.35 -0.77 16 37 H 0.14 -0.34 6.88 -52.49 -0.36 -0.71 16 38 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 41 H -0.23 -0.36 7.11 56.52 0.40 0.04 16 42 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 43 H 0.13 -0.09 7.26 -52.49 -0.38 -0.48 16 44 H 0.14 0.19 7.64 -52.49 -0.40 -0.21 16 45 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 46 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 396.22 15.07 5.97 5.97 Total: 0.00 -8.10 396.22 -12.42 -20.53 By element: Atomic # 1 Polarization: -5.73 SS G_CDS: -6.33 Total: -12.06 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -3.68 Total: -1.91 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.29 Total: 0.13 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.75 Total: -4.60 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.26 Total: -5.94 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -2.09 Total: -2.12 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.10 -12.42 -20.53 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.582 kcal (2) G-P(sol) polarization free energy of solvation -8.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds