Wall clock time and date at job start Sat Mar 6 2021 20:48:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99766 * 2 1 4 4 C 1.53000 * 109.47043 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.84949 * 45.33633 * 4 3 2 6 6 C 1.53781 * 113.61707 * 176.53192 * 4 3 2 7 7 C 1.53777 * 87.08336 * 140.06298 * 6 4 3 8 8 H 1.09003 * 113.60961 * 89.20081 * 7 6 4 9 9 N 1.46500 * 113.61534 * 220.01705 * 7 6 4 10 10 C 1.34779 * 119.99895 * 204.99945 * 9 7 6 11 11 O 1.21585 * 120.00177 * 0.02562 * 10 9 7 12 12 C 1.47534 * 119.99751 * 180.02562 * 10 9 7 13 13 C 1.40144 * 120.18955 * 180.02562 * 12 10 9 14 14 O 1.35648 * 120.15021 * 0.02562 * 13 12 10 15 15 C 1.38709 * 119.69388 * 180.02562 * 13 12 10 16 16 C 1.38050 * 120.09353 * 359.97438 * 15 13 12 17 17 C 1.50694 * 119.81096 * 180.02562 * 16 15 13 18 18 O 1.42898 * 109.47171 * 64.99941 * 17 16 15 19 19 Si 1.86294 * 109.47325 * 185.00340 * 17 16 15 20 20 C 1.38553 * 120.38309 * 359.97438 * 16 15 13 21 21 C 1.37784 * 120.30234 * 359.76150 * 20 16 15 22 22 C 1.53775 * 87.07992 * 334.56762 * 7 6 4 23 23 H 1.09003 * 109.47132 * 299.99594 * 1 2 3 24 24 H 1.08996 * 109.47289 * 60.00008 * 1 2 3 25 25 H 1.09007 * 109.47022 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46793 * 60.00463 * 3 2 1 27 27 H 1.08992 * 109.47352 * 300.00400 * 3 2 1 28 28 H 1.08997 * 113.61673 * 254.61847 * 6 4 3 29 29 H 1.09009 * 113.61202 * 25.43077 * 6 4 3 30 30 H 0.97002 * 120.00084 * 25.00713 * 9 7 6 31 31 H 0.96698 * 114.00378 * 90.00227 * 14 13 12 32 32 H 1.08007 * 119.95406 * 180.02562 * 15 13 12 33 33 H 1.09009 * 109.46706 * 305.00030 * 17 16 15 34 34 H 0.96694 * 113.99839 * 60.00408 * 18 17 16 35 35 H 1.48500 * 110.00120 * 179.97438 * 19 17 16 36 36 H 1.48505 * 110.00221 * 301.31636 * 19 17 16 37 37 H 1.08005 * 119.84446 * 180.02562 * 20 16 15 38 38 H 1.08001 * 120.04696 * 180.28225 * 21 20 16 39 39 H 1.08993 * 113.61636 * 270.87622 * 22 7 6 40 40 H 1.09008 * 113.61006 * 139.97865 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9013 0.4475 -0.7154 6 6 4.2605 2.5381 -0.0859 7 6 5.2672 1.9739 0.9305 8 1 6.1073 1.4538 0.4703 9 7 5.6858 2.9461 1.9434 10 6 6.8747 2.8047 2.5624 11 8 7.5999 1.8706 2.2798 12 6 7.2960 3.7834 3.5828 13 6 8.5316 3.6406 4.2285 14 8 9.3466 2.6017 3.9179 15 6 8.9172 4.5665 5.1867 16 6 8.0870 5.6236 5.5014 17 6 8.5126 6.6261 6.5429 18 8 9.6652 7.3330 6.0807 19 14 7.1255 7.8317 6.8478 20 6 6.8652 5.7688 4.8644 21 6 6.4685 4.8615 3.9063 22 6 4.1441 1.0362 1.4037 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 1.6886 1.8463 0.8901 27 1 1.6885 1.8464 -0.8899 28 1 4.6950 2.7398 -1.0650 29 1 3.6732 3.3730 0.2965 30 1 5.1073 3.6914 2.1686 31 1 9.9673 2.7895 3.2006 32 1 9.8687 4.4607 5.6866 33 1 8.7528 6.1064 7.4706 34 1 9.5240 7.8197 5.2572 35 1 7.5324 8.8253 7.8736 36 1 6.7669 8.5238 5.5837 37 1 6.2226 6.5993 5.1171 38 1 5.5172 4.9812 3.4091 39 1 3.5256 1.4601 2.1948 40 1 4.4847 0.0251 1.6273 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:38 Heat of formation + Delta-G solvation = -96.281903 kcal Electronic energy + Delta-G solvation = -23183.719633 eV Core-core repulsion = 19545.525340 eV Total energy + Delta-G solvation = -3638.194292 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -41.72445 -40.71984 -39.42404 -38.50897 -38.05072 -37.23741 -34.67480 -32.70866 -31.13599 -29.73087 -27.66722 -26.94035 -26.63167 -24.21800 -23.97985 -22.78449 -21.53053 -20.81073 -19.40057 -18.65295 -18.32259 -17.74401 -17.29754 -16.91647 -16.75330 -16.56011 -16.31255 -16.04680 -15.97743 -15.63558 -15.47799 -15.18003 -14.93198 -14.35283 -14.03605 -13.77215 -13.58402 -13.28566 -13.24335 -13.07794 -12.95062 -12.45309 -12.40342 -12.12043 -12.08599 -11.73581 -11.62919 -11.43162 -10.86047 -10.65043 -10.61280 -10.18786 -10.00996 -9.80714 -5.07277 -0.42943 0.07952 1.13422 1.46806 1.74913 1.85656 2.06865 2.55603 2.74047 3.05958 3.27416 3.35553 3.43075 3.52443 3.59907 3.69309 3.78724 3.83403 3.96068 4.18202 4.23739 4.28830 4.32845 4.38056 4.46738 4.49245 4.54696 4.58198 4.66013 4.67768 4.75250 4.75638 4.93459 4.96977 5.04180 5.09429 5.17053 5.23883 5.49670 5.53535 6.17422 6.25969 6.45593 6.69791 7.22514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.104 0.896 6 C -0.138 4.138 7 C 0.124 3.876 8 H 0.119 0.881 9 N -0.719 5.719 10 C 0.559 3.441 11 O -0.517 6.517 12 C -0.164 4.164 13 C 0.173 3.827 14 O -0.476 6.476 15 C -0.128 4.128 16 C -0.074 4.074 17 C -0.081 4.081 18 O -0.526 6.526 19 Si 0.691 3.309 20 C -0.138 4.138 21 C -0.065 4.065 22 C -0.143 4.143 23 H 0.041 0.959 24 H 0.041 0.959 25 H 0.087 0.913 26 H 0.050 0.950 27 H 0.051 0.949 28 H 0.081 0.919 29 H 0.088 0.912 30 H 0.399 0.601 31 H 0.398 0.602 32 H 0.140 0.860 33 H 0.123 0.877 34 H 0.377 0.623 35 H -0.255 1.255 36 H -0.258 1.258 37 H 0.136 0.864 38 H 0.133 0.867 39 H 0.085 0.915 40 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.150 4.254 -0.804 6.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.122 0.878 6 C -0.176 4.176 7 C 0.019 3.981 8 H 0.137 0.863 9 N -0.371 5.371 10 C 0.346 3.654 11 O -0.393 6.393 12 C -0.168 4.168 13 C 0.126 3.874 14 O -0.287 6.287 15 C -0.147 4.147 16 C -0.075 4.075 17 C -0.191 4.191 18 O -0.332 6.332 19 Si 0.592 3.408 20 C -0.155 4.155 21 C -0.084 4.084 22 C -0.182 4.182 23 H 0.060 0.940 24 H 0.060 0.940 25 H 0.106 0.894 26 H 0.068 0.932 27 H 0.069 0.931 28 H 0.099 0.901 29 H 0.106 0.894 30 H 0.234 0.766 31 H 0.257 0.743 32 H 0.158 0.842 33 H 0.141 0.859 34 H 0.225 0.775 35 H -0.180 1.180 36 H -0.183 1.183 37 H 0.153 0.847 38 H 0.151 0.849 39 H 0.104 0.896 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -4.785 3.686 -0.066 6.040 hybrid contribution 0.431 1.102 -1.110 1.622 sum -4.353 4.788 -1.176 6.577 Atomic orbital electron populations 1.22765 0.80803 1.03038 0.99992 1.87903 1.19822 1.27755 1.95395 1.22505 0.92803 0.84950 1.00173 1.22335 0.93134 0.98252 0.98865 0.87753 1.23365 0.97095 0.97038 1.00131 1.22520 0.96366 0.90431 0.88755 0.86334 1.45903 1.19929 1.29962 1.41261 1.18083 0.81395 0.84908 0.80984 1.90836 1.52989 1.31792 1.63644 1.20448 0.97626 0.97925 1.00769 1.18515 0.89467 0.86375 0.93017 1.84758 1.51338 1.34811 1.57807 1.21355 1.01170 0.93126 0.99053 1.20372 0.94089 0.96076 0.96980 1.25157 0.97528 0.98281 0.98118 1.86637 1.34232 1.67063 1.45313 0.94854 0.83015 0.80864 0.82079 1.20993 0.96397 1.00466 0.97660 1.21133 0.98613 0.92449 0.96207 1.23521 0.97073 1.00995 0.96618 0.94030 0.94013 0.89442 0.93169 0.93070 0.90071 0.89364 0.76566 0.74346 0.84187 0.85927 0.77548 1.17997 1.18303 0.84671 0.84898 0.89633 0.90458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.71 10.70 -35.23 -0.38 -1.08 16 3 C 0.07 -0.05 5.77 37.16 0.21 0.17 16 4 C -0.11 0.11 4.01 -89.81 -0.36 -0.25 16 5 H 0.10 -0.03 8.14 -51.93 -0.42 -0.46 16 6 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 7 C 0.12 -0.06 4.24 -67.12 -0.28 -0.34 16 8 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 9 N -0.72 0.50 5.31 -54.06 -0.29 0.21 16 10 C 0.56 1.36 7.76 -12.47 -0.10 1.26 16 11 O -0.52 -3.21 14.76 -16.59 -0.24 -3.46 16 12 C -0.16 -0.16 5.89 -104.84 -0.62 -0.78 16 13 C 0.17 0.31 6.72 -38.69 -0.26 0.05 16 14 O -0.48 -1.36 11.58 -40.52 -0.47 -1.83 16 15 C -0.13 -0.06 9.60 -39.48 -0.38 -0.44 16 16 C -0.07 0.07 5.35 -104.58 -0.56 -0.49 16 17 C -0.08 0.11 2.79 36.00 0.10 0.21 16 18 O -0.53 -0.06 12.83 -35.23 -0.45 -0.51 16 19 Si 0.69 -1.60 29.87 -169.99 -5.08 -6.68 16 20 C -0.14 0.28 8.64 -39.63 -0.34 -0.06 16 21 C -0.07 0.12 9.53 -39.20 -0.37 -0.25 16 22 C -0.14 0.04 7.43 -25.92 -0.19 -0.15 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 26 H 0.05 -0.08 7.88 -51.93 -0.41 -0.49 16 27 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.09 -0.34 8.08 -51.92 -0.42 -0.76 16 30 H 0.40 -1.42 6.76 -40.82 -0.28 -1.70 16 31 H 0.40 -0.32 9.06 45.56 0.41 0.09 16 32 H 0.14 0.03 8.06 -52.48 -0.42 -0.39 16 33 H 0.12 -0.23 7.96 -51.92 -0.41 -0.64 16 34 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 35 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 36 H -0.26 0.22 7.00 56.52 0.40 0.61 16 37 H 0.14 -0.54 4.81 -52.48 -0.25 -0.80 16 38 H 0.13 -0.65 6.40 -52.49 -0.34 -0.98 16 39 H 0.09 -0.07 7.92 -51.93 -0.41 -0.48 16 40 H 0.08 0.10 8.14 -51.92 -0.42 -0.33 16 LS Contribution 335.38 15.07 5.05 5.05 Total: 0.00 -9.18 335.38 -8.76 -17.95 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -4.68 Total: -9.82 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -2.23 Total: 0.17 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.29 Total: 0.21 kcal Atomic # 8 Polarization: -5.33 SS G_CDS: -1.54 Total: -6.88 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.08 Total: -6.68 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -9.18 -8.76 -17.95 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.336 kcal (2) G-P(sol) polarization free energy of solvation -9.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds