Wall clock time and date at job start Sat Mar 6 2021 20:48:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42908 * 114.00091 * 2 1 4 4 C 1.52996 * 109.46998 * 179.97438 * 3 2 1 5 5 H 1.08995 * 112.85461 * 43.80764 * 4 3 2 6 6 C 1.53782 * 113.60801 * 175.00037 * 4 3 2 7 7 C 1.53783 * 87.08114 * 139.98134 * 6 4 3 8 8 H 1.09005 * 113.61495 * 89.19655 * 7 6 4 9 9 N 1.46496 * 113.61614 * 220.01513 * 7 6 4 10 10 C 1.34771 * 120.00425 * 204.99755 * 9 7 6 11 11 O 1.21597 * 119.99798 * 0.02562 * 10 9 7 12 12 C 1.47536 * 120.00594 * 180.02562 * 10 9 7 13 13 C 1.40133 * 120.19320 * 180.27401 * 12 10 9 14 14 O 1.35654 * 120.15493 * 0.02562 * 13 12 10 15 15 C 1.38712 * 119.69852 * 180.24673 * 13 12 10 16 16 C 1.50699 * 119.95936 * 179.75247 * 15 13 12 17 17 O 1.42901 * 109.46830 * 284.72589 * 16 15 13 18 18 Si 1.86298 * 109.46950 * 164.73027 * 16 15 13 19 19 C 1.38060 * 120.08146 * 359.48074 * 15 13 12 20 20 C 1.38552 * 120.39172 * 0.27150 * 19 15 13 21 21 C 1.50697 * 119.84889 * 180.02562 * 20 19 15 22 22 C 1.37785 * 120.29592 * 359.97438 * 20 19 15 23 23 C 1.53776 * 113.61401 * 272.49417 * 4 3 2 24 24 H 1.08993 * 109.47229 * 299.99886 * 1 2 3 25 25 H 1.08997 * 109.46812 * 60.00276 * 1 2 3 26 26 H 1.09000 * 109.46569 * 179.97438 * 1 2 3 27 27 H 1.08994 * 109.46657 * 59.99526 * 3 2 1 28 28 H 1.09000 * 109.46713 * 299.99947 * 3 2 1 29 29 H 1.08999 * 113.61965 * 25.43222 * 6 4 3 30 30 H 1.09002 * 113.68883 * 254.53819 * 6 4 3 31 31 H 0.97005 * 119.99898 * 25.00269 * 9 7 6 32 32 H 0.96700 * 113.99793 * 270.23350 * 14 13 12 33 33 H 1.08991 * 109.47351 * 44.72737 * 16 15 13 34 34 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 35 35 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 36 36 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 37 37 H 1.08002 * 119.80238 * 180.25358 * 19 15 13 38 38 H 1.09001 * 109.46889 * 90.00074 * 21 20 19 39 39 H 1.08996 * 109.46844 * 210.00042 * 21 20 19 40 40 H 1.08998 * 109.47110 * 330.00131 * 21 20 19 41 41 H 1.08005 * 120.04138 * 180.02562 * 22 20 19 42 42 H 1.09004 * 113.61556 * 105.47607 * 23 4 3 43 43 H 1.08998 * 113.61472 * 334.57185 * 23 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 1 3.9005 0.4285 -0.6943 6 6 4.2603 2.5354 -0.1221 7 6 5.2671 1.9996 0.9095 8 1 6.1073 1.4670 0.4639 9 7 5.6857 2.9995 1.8951 10 6 6.8745 2.8755 2.5177 11 8 7.5999 1.9340 2.2611 12 6 7.2958 3.8821 3.5107 13 6 8.5336 3.7602 4.1562 14 8 9.3511 2.7159 3.8708 15 6 8.9173 4.7097 5.0918 16 6 10.2447 4.5813 5.7936 17 8 10.1628 3.5535 6.7830 18 14 10.6731 6.1988 6.6126 19 6 8.0870 5.7753 5.3767 20 6 6.8647 5.9022 4.7368 21 6 5.9682 7.0705 5.0568 22 6 6.4656 4.9655 3.8085 23 6 4.1441 1.0751 1.4086 24 1 -0.3633 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 -0.0005 27 1 1.6886 1.8464 0.8899 28 1 1.6886 1.8464 -0.8900 29 1 3.6736 3.3802 0.2384 30 1 4.6952 2.7112 -1.1060 31 1 5.1071 3.7507 2.0996 32 1 9.2046 1.9384 4.4269 33 1 11.0164 4.3260 5.0675 34 1 9.4947 3.7147 7.4634 35 1 11.9805 6.0855 7.3078 36 1 10.7299 7.2822 5.5985 37 1 8.3920 6.5142 6.1030 38 1 6.1995 7.8996 4.3880 39 1 4.9271 6.7765 4.9245 40 1 6.1299 7.3805 6.0892 41 1 5.5121 5.0687 3.3118 42 1 4.4848 0.0707 1.6601 43 1 3.5255 1.5208 2.1875 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:40 Heat of formation + Delta-G solvation = -103.690157 kcal Electronic energy + Delta-G solvation = -25392.294149 eV Core-core repulsion = 21598.240991 eV Total energy + Delta-G solvation = -3794.053157 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.78929 -40.78702 -39.40092 -38.20296 -37.97940 -37.56078 -34.68399 -33.13278 -32.68737 -29.68037 -27.69845 -27.07119 -26.79562 -26.71412 -25.34640 -23.11504 -22.04780 -21.46072 -20.63820 -19.52554 -18.35330 -18.03416 -17.57502 -17.32993 -16.97287 -16.77807 -16.76697 -16.13738 -16.07319 -15.67489 -15.61297 -15.49430 -14.87054 -14.76063 -14.65698 -14.20220 -14.01740 -13.78114 -13.58374 -13.39667 -13.21673 -13.11290 -13.01163 -12.66797 -12.43156 -12.14055 -12.10591 -12.04687 -11.73882 -11.66709 -11.43646 -10.80845 -10.63018 -10.40860 -10.20095 -9.97727 -9.54822 -5.10610 -0.35416 0.02363 1.22045 1.59958 1.76459 1.93947 2.09749 2.56285 2.73835 3.19650 3.35858 3.39388 3.48448 3.52059 3.57556 3.62242 3.77189 3.83531 4.02131 4.06233 4.20830 4.26526 4.29031 4.37747 4.45819 4.47613 4.49404 4.51752 4.55034 4.57862 4.67683 4.69934 4.74914 4.77245 4.88506 4.93380 4.97009 5.02525 5.14564 5.24547 5.27213 5.51798 5.56481 6.16988 6.47295 6.51165 6.78180 7.24774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.138 4.138 7 C 0.124 3.876 8 H 0.119 0.881 9 N -0.719 5.719 10 C 0.560 3.440 11 O -0.516 6.516 12 C -0.165 4.165 13 C 0.191 3.809 14 O -0.473 6.473 15 C -0.153 4.153 16 C -0.063 4.063 17 O -0.537 6.537 18 Si 0.684 3.316 19 C -0.073 4.073 20 C -0.098 4.098 21 C -0.117 4.117 22 C -0.068 4.068 23 C -0.143 4.143 24 H 0.041 0.959 25 H 0.041 0.959 26 H 0.087 0.913 27 H 0.050 0.950 28 H 0.051 0.949 29 H 0.088 0.912 30 H 0.081 0.919 31 H 0.398 0.602 32 H 0.400 0.600 33 H 0.119 0.881 34 H 0.377 0.623 35 H -0.252 1.252 36 H -0.256 1.256 37 H 0.137 0.863 38 H 0.075 0.925 39 H 0.070 0.930 40 H 0.073 0.927 41 H 0.131 0.869 42 H 0.076 0.924 43 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.037 5.238 2.872 9.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.177 4.177 7 C 0.019 3.981 8 H 0.137 0.863 9 N -0.371 5.371 10 C 0.347 3.653 11 O -0.392 6.392 12 C -0.168 4.168 13 C 0.144 3.856 14 O -0.284 6.284 15 C -0.154 4.154 16 C -0.173 4.173 17 O -0.342 6.342 18 Si 0.586 3.414 19 C -0.091 4.091 20 C -0.098 4.098 21 C -0.174 4.174 22 C -0.086 4.086 23 C -0.182 4.182 24 H 0.060 0.940 25 H 0.060 0.940 26 H 0.106 0.894 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.106 0.894 30 H 0.100 0.900 31 H 0.234 0.766 32 H 0.259 0.741 33 H 0.137 0.863 34 H 0.224 0.776 35 H -0.176 1.176 36 H -0.180 1.180 37 H 0.154 0.846 38 H 0.094 0.906 39 H 0.089 0.911 40 H 0.092 0.908 41 H 0.148 0.852 42 H 0.095 0.905 43 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -5.099 5.148 1.937 7.500 hybrid contribution -0.749 -0.067 -0.204 0.779 sum -5.848 5.080 1.734 7.938 Atomic orbital electron populations 1.22762 0.80805 1.03036 0.99994 1.87904 1.19827 1.27777 1.95397 1.22513 0.92804 0.84932 1.00177 1.22332 0.93116 0.98369 0.98742 0.87708 1.23369 0.97083 0.97087 1.00121 1.22522 0.96351 0.90054 0.89162 0.86325 1.45894 1.19880 1.28505 1.42781 1.18072 0.81160 0.85211 0.80868 1.90840 1.52659 1.32244 1.63474 1.20410 0.95872 0.98398 1.02156 1.18240 0.86988 0.89482 0.90904 1.84682 1.57445 1.24274 1.62039 1.20712 0.98611 0.97085 0.99004 1.25017 0.95941 1.02948 0.93403 1.86546 1.61923 1.46312 1.39425 0.95171 0.85630 0.75306 0.85337 1.20988 0.93259 0.96181 0.98637 1.19797 0.95556 0.97389 0.97056 1.20839 0.98412 0.95356 1.02743 1.21118 0.98669 0.92532 0.96312 1.23529 0.97107 1.00979 0.96581 0.94043 0.94001 0.89439 0.93184 0.93044 0.89391 0.90039 0.76613 0.74085 0.86345 0.77586 1.17649 1.18012 0.84591 0.90650 0.91069 0.90774 0.85161 0.90484 0.89679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.74 10.70 -35.23 -0.38 -1.12 16 3 C 0.07 -0.04 5.78 37.16 0.21 0.18 16 4 C -0.11 0.08 4.01 -89.81 -0.36 -0.28 16 5 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 6 C -0.14 0.28 7.39 -25.92 -0.19 0.09 16 7 C 0.12 0.00 4.24 -67.12 -0.28 -0.29 16 8 H 0.12 0.23 7.46 -51.93 -0.39 -0.16 16 9 N -0.72 0.13 5.30 -54.05 -0.29 -0.16 16 10 C 0.56 1.71 7.76 -12.47 -0.10 1.61 16 11 O -0.52 -3.54 14.76 -16.60 -0.24 -3.78 16 12 C -0.16 -0.27 5.89 -104.85 -0.62 -0.89 16 13 C 0.19 0.48 6.69 -38.70 -0.26 0.23 16 14 O -0.47 -1.90 10.90 -40.54 -0.44 -2.34 16 15 C -0.15 -0.08 5.27 -104.51 -0.55 -0.63 16 16 C -0.06 -0.02 2.38 36.01 0.09 0.06 16 17 O -0.54 -0.07 12.88 -35.23 -0.45 -0.52 16 18 Si 0.68 -0.75 29.91 -169.99 -5.08 -5.84 16 19 C -0.07 0.11 8.30 -39.53 -0.33 -0.22 16 20 C -0.10 0.18 5.87 -104.67 -0.61 -0.44 16 21 C -0.12 0.48 10.00 36.00 0.36 0.84 16 22 C -0.07 0.08 9.18 -39.20 -0.36 -0.28 16 23 C -0.14 0.03 7.43 -25.92 -0.19 -0.16 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.05 -0.07 7.84 -51.93 -0.41 -0.48 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.09 -0.31 8.08 -51.93 -0.42 -0.73 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.40 -1.19 6.76 -40.82 -0.28 -1.47 16 32 H 0.40 0.54 9.06 45.56 0.41 0.95 16 33 H 0.12 0.25 7.82 -51.93 -0.41 -0.15 16 34 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 35 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 36 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 37 H 0.14 -0.54 5.10 -52.49 -0.27 -0.81 16 38 H 0.07 -0.31 8.14 -51.93 -0.42 -0.74 16 39 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 40 H 0.07 -0.37 8.08 -51.93 -0.42 -0.79 16 41 H 0.13 -0.52 6.40 -52.48 -0.34 -0.86 16 42 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 43 H 0.08 -0.07 7.89 -51.93 -0.41 -0.48 16 LS Contribution 356.29 15.07 5.37 5.37 Total: 0.00 -9.47 356.29 -9.12 -18.60 By element: Atomic # 1 Polarization: -5.60 SS G_CDS: -5.52 Total: -11.12 kcal Atomic # 6 Polarization: 3.00 SS G_CDS: -2.08 Total: 0.92 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.29 Total: -0.16 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -1.52 Total: -7.76 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.08 Total: -5.84 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.47 -9.12 -18.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.095 kcal (2) G-P(sol) polarization free energy of solvation -9.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds