Wall clock time and date at job start Sat Mar 6 2021 20:48:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42908 * 114.00091 * 2 1 4 4 C 1.52996 * 109.46998 * 179.97438 * 3 2 1 5 5 H 1.08995 * 112.85461 * 43.80764 * 4 3 2 6 6 C 1.53782 * 113.60801 * 175.00037 * 4 3 2 7 7 C 1.53783 * 87.08114 * 139.98134 * 6 4 3 8 8 H 1.09005 * 113.61495 * 89.19655 * 7 6 4 9 9 N 1.46496 * 113.61614 * 220.01513 * 7 6 4 10 10 C 1.34771 * 120.00425 * 204.99755 * 9 7 6 11 11 O 1.21597 * 119.99798 * 0.02562 * 10 9 7 12 12 C 1.47536 * 120.00594 * 180.02562 * 10 9 7 13 13 C 1.40133 * 120.19320 * 180.27401 * 12 10 9 14 14 O 1.35654 * 120.15493 * 0.02562 * 13 12 10 15 15 C 1.38712 * 119.69852 * 180.24673 * 13 12 10 16 16 C 1.50699 * 119.95936 * 179.75247 * 15 13 12 17 17 O 1.42901 * 109.46830 * 284.72589 * 16 15 13 18 18 Si 1.86298 * 109.46950 * 164.73027 * 16 15 13 19 19 C 1.38060 * 120.08146 * 359.48074 * 15 13 12 20 20 C 1.38552 * 120.39172 * 0.27150 * 19 15 13 21 21 C 1.50697 * 119.84889 * 180.02562 * 20 19 15 22 22 C 1.37785 * 120.29592 * 359.97438 * 20 19 15 23 23 C 1.53776 * 113.61401 * 272.49417 * 4 3 2 24 24 H 1.08993 * 109.47229 * 299.99886 * 1 2 3 25 25 H 1.08997 * 109.46812 * 60.00276 * 1 2 3 26 26 H 1.09000 * 109.46569 * 179.97438 * 1 2 3 27 27 H 1.08994 * 109.46657 * 59.99526 * 3 2 1 28 28 H 1.09000 * 109.46713 * 299.99947 * 3 2 1 29 29 H 1.08999 * 113.61965 * 25.43222 * 6 4 3 30 30 H 1.09002 * 113.68883 * 254.53819 * 6 4 3 31 31 H 0.97005 * 119.99898 * 25.00269 * 9 7 6 32 32 H 0.96700 * 113.99793 * 270.23350 * 14 13 12 33 33 H 1.08991 * 109.47351 * 44.72737 * 16 15 13 34 34 H 0.96708 * 114.00246 * 299.99864 * 17 16 15 35 35 H 1.48506 * 109.99834 * 180.02562 * 18 16 15 36 36 H 1.48502 * 110.00011 * 301.31529 * 18 16 15 37 37 H 1.08002 * 119.80238 * 180.25358 * 19 15 13 38 38 H 1.09001 * 109.46889 * 90.00074 * 21 20 19 39 39 H 1.08996 * 109.46844 * 210.00042 * 21 20 19 40 40 H 1.08998 * 109.47110 * 330.00131 * 21 20 19 41 41 H 1.08005 * 120.04138 * 180.02562 * 22 20 19 42 42 H 1.09004 * 113.61556 * 105.47607 * 23 4 3 43 43 H 1.08998 * 113.61472 * 334.57185 * 23 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 1 3.9005 0.4285 -0.6943 6 6 4.2603 2.5354 -0.1221 7 6 5.2671 1.9996 0.9095 8 1 6.1073 1.4670 0.4639 9 7 5.6857 2.9995 1.8951 10 6 6.8745 2.8755 2.5177 11 8 7.5999 1.9340 2.2611 12 6 7.2958 3.8821 3.5107 13 6 8.5336 3.7602 4.1562 14 8 9.3511 2.7159 3.8708 15 6 8.9173 4.7097 5.0918 16 6 10.2447 4.5813 5.7936 17 8 10.1628 3.5535 6.7830 18 14 10.6731 6.1988 6.6126 19 6 8.0870 5.7753 5.3767 20 6 6.8647 5.9022 4.7368 21 6 5.9682 7.0705 5.0568 22 6 6.4656 4.9655 3.8085 23 6 4.1441 1.0751 1.4086 24 1 -0.3633 0.5138 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 -0.0005 27 1 1.6886 1.8464 0.8899 28 1 1.6886 1.8464 -0.8900 29 1 3.6736 3.3802 0.2384 30 1 4.6952 2.7112 -1.1060 31 1 5.1071 3.7507 2.0996 32 1 9.2046 1.9384 4.4269 33 1 11.0164 4.3260 5.0675 34 1 9.4947 3.7147 7.4634 35 1 11.9805 6.0855 7.3078 36 1 10.7299 7.2822 5.5985 37 1 8.3920 6.5142 6.1030 38 1 6.1995 7.8996 4.3880 39 1 4.9271 6.7765 4.9245 40 1 6.1299 7.3805 6.0892 41 1 5.5121 5.0687 3.3118 42 1 4.4848 0.0707 1.6601 43 1 3.5255 1.5208 2.1875 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_13422088.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:39 Heat of formation + Delta-G solvation = -106.326717 kcal Electronic energy + Delta-G solvation = -25392.408479 eV Core-core repulsion = 21598.240991 eV Total energy + Delta-G solvation = -3794.167487 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.84638 -40.78695 -39.49918 -38.23630 -38.01514 -37.61406 -34.82227 -33.04559 -32.65607 -29.63409 -27.51929 -27.02926 -26.76770 -26.66431 -25.37496 -23.10896 -21.99737 -21.57050 -20.61518 -19.60948 -18.39338 -18.05398 -17.58898 -17.31724 -16.97122 -16.80307 -16.74746 -16.19058 -16.10403 -15.73300 -15.69824 -15.48771 -14.90608 -14.77939 -14.40109 -14.24171 -13.99431 -13.66171 -13.47426 -13.29184 -13.19409 -12.99899 -12.84030 -12.56294 -12.40649 -12.19237 -12.12624 -12.05695 -11.75218 -11.66854 -11.42562 -10.97583 -10.59413 -10.43636 -10.25705 -9.99457 -9.50577 -5.06715 -0.35579 0.05971 1.24032 1.62439 1.68965 1.94143 2.05211 2.53661 2.81299 3.18072 3.40061 3.43661 3.54010 3.58831 3.62098 3.77610 3.80784 3.88054 4.12961 4.18152 4.28997 4.36314 4.38930 4.48455 4.51649 4.55708 4.59385 4.61033 4.68353 4.76161 4.79325 4.83767 4.85534 4.93721 4.98138 4.98903 5.04009 5.17288 5.23468 5.28529 5.43554 5.52645 5.69430 6.24389 6.45062 6.67129 6.74960 7.13949 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.420 6.420 3 C 0.070 3.930 4 C -0.106 4.106 5 H 0.091 0.909 6 C -0.119 4.119 7 C 0.116 3.884 8 H 0.091 0.909 9 N -0.701 5.701 10 C 0.553 3.447 11 O -0.568 6.568 12 C -0.182 4.182 13 C 0.157 3.843 14 O -0.496 6.496 15 C -0.159 4.159 16 C -0.076 4.076 17 O -0.554 6.554 18 Si 0.797 3.203 19 C -0.070 4.070 20 C -0.093 4.093 21 C -0.118 4.118 22 C -0.061 4.061 23 C -0.141 4.141 24 H 0.051 0.949 25 H 0.050 0.950 26 H 0.089 0.911 27 H 0.064 0.936 28 H 0.062 0.938 29 H 0.114 0.886 30 H 0.084 0.916 31 H 0.415 0.585 32 H 0.402 0.598 33 H 0.090 0.910 34 H 0.396 0.604 35 H -0.300 1.300 36 H -0.284 1.284 37 H 0.165 0.835 38 H 0.081 0.919 39 H 0.084 0.916 40 H 0.088 0.912 41 H 0.161 0.839 42 H 0.055 0.945 43 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.360 7.873 3.634 12.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.340 6.340 3 C -0.006 4.006 4 C -0.125 4.125 5 H 0.109 0.891 6 C -0.157 4.157 7 C 0.011 3.989 8 H 0.109 0.891 9 N -0.353 5.353 10 C 0.342 3.658 11 O -0.448 6.448 12 C -0.185 4.185 13 C 0.111 3.889 14 O -0.309 6.309 15 C -0.160 4.160 16 C -0.185 4.185 17 O -0.362 6.362 18 Si 0.702 3.298 19 C -0.087 4.087 20 C -0.093 4.093 21 C -0.174 4.174 22 C -0.080 4.080 23 C -0.179 4.179 24 H 0.069 0.931 25 H 0.069 0.931 26 H 0.107 0.893 27 H 0.082 0.918 28 H 0.080 0.920 29 H 0.132 0.868 30 H 0.103 0.897 31 H 0.254 0.746 32 H 0.261 0.739 33 H 0.108 0.892 34 H 0.246 0.754 35 H -0.228 1.228 36 H -0.211 1.211 37 H 0.182 0.818 38 H 0.100 0.900 39 H 0.103 0.897 40 H 0.107 0.893 41 H 0.178 0.822 42 H 0.074 0.926 43 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -7.499 7.789 2.696 11.143 hybrid contribution -0.028 -0.909 -0.430 1.006 sum -7.527 6.880 2.266 10.446 Atomic orbital electron populations 1.22884 0.79745 1.03531 1.00879 1.87865 1.21193 1.29332 1.95612 1.22624 0.92331 0.84299 1.01321 1.22281 0.93521 0.98905 0.97815 0.89093 1.23307 0.95838 0.97067 0.99525 1.22483 0.95875 0.90541 0.89989 0.89105 1.45758 1.19051 1.28690 1.41803 1.18437 0.81470 0.84896 0.81008 1.90808 1.54334 1.34370 1.65278 1.20428 0.96360 0.99332 1.02411 1.18630 0.87800 0.89821 0.92668 1.84654 1.58386 1.25077 1.62746 1.20758 0.98948 0.97455 0.98871 1.25251 0.95487 1.04303 0.93423 1.86501 1.62896 1.46774 1.40011 0.94021 0.82480 0.71678 0.81663 1.21328 0.93031 0.95652 0.98730 1.20168 0.95523 0.97679 0.95908 1.20940 0.98475 0.94201 1.03779 1.21448 0.99157 0.91275 0.96112 1.23517 0.97133 0.99835 0.97446 0.93066 0.93145 0.89290 0.91795 0.91980 0.86808 0.89689 0.74645 0.73893 0.89193 0.75445 1.22830 1.21057 0.81799 0.90042 0.89738 0.89329 0.82165 0.92632 0.88420 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 11.01 113.37 1.25 1.21 16 2 O -0.42 -1.62 10.70 -148.98 -1.59 -3.21 16 3 C 0.07 -0.13 5.78 71.98 0.42 0.28 16 4 C -0.11 0.14 4.01 -10.27 -0.04 0.10 16 5 H 0.09 0.13 8.14 -2.39 -0.02 0.11 16 6 C -0.12 0.58 7.39 31.12 0.23 0.81 16 7 C 0.12 0.11 4.24 45.52 0.19 0.31 16 8 H 0.09 0.63 7.46 -2.38 -0.02 0.61 16 9 N -0.70 0.06 5.30 -443.19 -2.35 -2.30 16 10 C 0.55 4.38 7.76 86.70 0.67 5.05 16 11 O -0.57 -9.83 14.76 16.90 0.25 -9.59 16 12 C -0.18 -0.77 5.89 -20.01 -0.12 -0.89 16 13 C 0.16 1.13 6.69 22.84 0.15 1.28 16 14 O -0.50 -5.89 10.90 -68.77 -0.75 -6.64 16 15 C -0.16 -0.28 5.27 -19.79 -0.10 -0.38 16 16 C -0.08 -0.15 2.38 71.24 0.17 0.02 16 17 O -0.55 -0.84 12.88 -148.98 -1.92 -2.76 16 18 Si 0.80 -1.94 29.91 68.60 2.05 0.11 16 19 C -0.07 0.30 8.30 22.30 0.19 0.49 16 20 C -0.09 0.54 5.87 -19.90 -0.12 0.42 16 21 C -0.12 1.37 10.00 71.23 0.71 2.08 16 22 C -0.06 0.24 9.18 22.52 0.21 0.44 16 23 C -0.14 -0.06 7.43 31.12 0.23 0.18 16 24 H 0.05 -0.20 8.14 -2.39 -0.02 -0.22 16 25 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 26 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 27 H 0.06 -0.30 7.84 -2.39 -0.02 -0.32 16 28 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 29 H 0.11 -1.11 8.08 -2.39 -0.02 -1.13 16 30 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 31 H 0.41 -3.11 6.76 -92.70 -0.63 -3.74 16 32 H 0.40 2.89 9.06 -74.06 -0.67 2.22 16 33 H 0.09 0.65 7.82 -2.39 -0.02 0.64 16 34 H 0.40 -3.17 8.70 -74.05 -0.64 -3.81 16 35 H -0.30 -1.67 7.11 99.48 0.71 -0.96 16 36 H -0.28 -0.64 7.11 99.48 0.71 0.06 16 37 H 0.17 -1.75 5.10 -2.91 -0.01 -1.76 16 38 H 0.08 -0.96 8.14 -2.39 -0.02 -0.98 16 39 H 0.08 -1.15 8.08 -2.39 -0.02 -1.17 16 40 H 0.09 -1.22 8.08 -2.39 -0.02 -1.24 16 41 H 0.16 -1.74 6.40 -2.91 -0.02 -1.76 16 42 H 0.05 0.26 8.14 -2.38 -0.02 0.24 16 43 H 0.10 -0.22 7.89 -2.39 -0.02 -0.23 16 Total: 0.00 -26.48 356.29 -1.12 -27.60 By element: Atomic # 1 Polarization: -13.77 SS G_CDS: -0.85 Total: -14.62 kcal Atomic # 6 Polarization: 7.36 SS G_CDS: 4.04 Total: 11.40 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -2.35 Total: -2.30 kcal Atomic # 8 Polarization: -18.18 SS G_CDS: -4.01 Total: -22.20 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: 2.05 Total: 0.11 kcal Total: -26.48 -1.12 -27.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13422088.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.727 kcal (2) G-P(sol) polarization free energy of solvation -26.477 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.327 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds