Wall clock time and date at job start Sat Mar 6 2021 20:48:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42898 * 114.00245 * 2 1 4 4 C 1.53001 * 109.47593 * 180.02562 * 3 2 1 5 5 H 1.09007 * 112.84823 * 316.20166 * 4 3 2 6 6 C 1.53783 * 113.69018 * 87.46122 * 4 3 2 7 7 C 1.53782 * 87.07791 * 139.99704 * 6 4 3 8 8 H 1.08998 * 113.68941 * 89.12835 * 7 6 4 9 9 N 1.46501 * 113.61355 * 220.02250 * 7 6 4 10 10 C 1.34778 * 119.99905 * 252.50125 * 9 7 6 11 11 O 1.21284 * 120.00241 * 359.97438 * 10 9 7 12 12 C 1.50703 * 120.00284 * 179.97438 * 10 9 7 13 13 C 1.52993 * 109.46928 * 299.99819 * 12 10 9 14 14 O 1.42895 * 109.47091 * 179.97438 * 12 10 9 15 15 C 1.36020 * 116.99506 * 209.99889 * 14 12 10 16 16 C 1.38623 * 120.07679 * 90.00578 * 15 14 12 17 17 Cl 1.73599 * 120.01352 * 359.97438 * 16 15 14 18 18 C 1.38384 * 119.98012 * 180.02562 * 16 15 14 19 19 C 1.38213 * 120.13261 * 0.25720 * 18 16 15 20 20 C 1.50700 * 119.92383 * 179.74332 * 19 18 16 21 21 O 1.42897 * 109.47143 * 244.99661 * 20 19 18 22 22 Si 1.86298 * 109.46902 * 4.99708 * 20 19 18 23 23 C 1.38277 * 120.15052 * 359.48489 * 19 18 16 24 24 C 1.38556 * 120.01945 * 0.51250 * 23 19 18 25 25 O 1.36001 * 120.06393 * 179.76720 * 24 23 19 26 26 C 1.42899 * 116.99886 * 359.97438 * 25 24 23 27 27 C 1.53778 * 87.08348 * 334.56869 * 7 6 4 28 28 H 1.09003 * 109.47422 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.46836 * 299.99980 * 1 2 3 30 30 H 1.08997 * 109.47059 * 59.99934 * 1 2 3 31 31 H 1.09007 * 109.46904 * 60.00141 * 3 2 1 32 32 H 1.09001 * 109.47355 * 300.00388 * 3 2 1 33 33 H 1.08995 * 113.61197 * 25.44833 * 6 4 3 34 34 H 1.08998 * 113.61830 * 254.54239 * 6 4 3 35 35 H 0.96992 * 120.00246 * 72.49368 * 9 7 6 36 36 H 1.09000 * 109.47000 * 59.99431 * 12 10 9 37 37 H 1.08995 * 109.47341 * 179.97438 * 13 12 10 38 38 H 1.09007 * 109.47329 * 299.99731 * 13 12 10 39 39 H 1.08999 * 109.47558 * 59.99834 * 13 12 10 40 40 H 1.08002 * 119.93161 * 179.97438 * 18 16 15 41 41 H 1.09004 * 109.46721 * 124.99575 * 20 19 18 42 42 H 0.96700 * 113.99879 * 180.02562 * 21 20 19 43 43 H 1.48493 * 110.00274 * 299.99768 * 22 20 19 44 44 H 1.48499 * 109.99997 * 61.31920 * 22 20 19 45 45 H 1.07997 * 119.98830 * 180.23603 * 23 19 18 46 46 H 1.09000 * 109.47070 * 299.99575 * 26 25 24 47 47 H 1.08993 * 109.47853 * 59.99996 * 26 25 24 48 48 H 1.09009 * 109.46713 * 179.97438 * 26 25 24 49 49 H 1.08997 * 113.61745 * 139.98026 * 27 7 6 50 50 H 1.09001 * 113.61777 * 270.80305 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5355 1.1847 -0.0006 5 1 3.9005 0.4283 0.6943 6 6 4.1459 1.0740 -1.4078 7 6 5.2684 1.9986 -0.9079 8 1 6.1079 1.4662 -0.4608 9 7 5.6884 2.9978 -1.8936 10 6 6.8780 2.8731 -2.5146 11 8 7.6011 1.9341 -2.2572 12 6 7.3098 3.9006 -3.5291 13 6 6.2972 3.9425 -4.6751 14 8 8.5968 3.5514 -4.0425 15 6 9.4008 4.5737 -4.4407 16 6 10.2714 5.1649 -3.5384 17 17 10.3362 4.6012 -1.8977 18 6 11.0881 6.2052 -3.9455 19 6 11.0340 6.6602 -5.2495 20 6 11.9214 7.7972 -5.6863 21 8 11.1148 8.9242 -6.0346 22 14 13.0678 8.2608 -4.2929 23 6 10.1715 6.0710 -6.1555 24 6 9.3510 5.0290 -5.7546 25 8 8.4988 4.4520 -6.6438 26 6 8.5014 4.9708 -7.9752 27 6 4.2605 2.5352 0.1221 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 1.6886 1.8463 0.8901 32 1 1.6886 1.8464 -0.8899 33 1 3.5284 1.5192 -2.1878 34 1 4.4868 0.0694 -1.6581 35 1 5.1102 3.7489 -2.0993 36 1 7.3619 4.8803 -3.0542 37 1 6.6091 4.6860 -5.4086 38 1 6.2450 2.9627 -5.1500 39 1 5.3156 4.2091 -4.2832 40 1 11.7658 6.6654 -3.2417 41 1 12.5077 7.4886 -6.5519 42 1 11.6208 9.6949 -6.3263 43 1 12.2807 8.6834 -3.1068 44 1 13.9342 7.1067 -3.9427 45 1 10.1341 6.4261 -7.1747 46 1 8.2318 6.0268 -7.9542 47 1 9.4957 4.8583 -8.4072 48 1 7.7787 4.4229 -8.5800 49 1 4.6937 2.7103 1.1069 50 1 3.6752 3.3809 -0.2392 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:46 Heat of formation + Delta-G solvation = -129.003702 kcal Electronic energy + Delta-G solvation = -34030.124502 eV Core-core repulsion = 29245.416444 eV Total energy + Delta-G solvation = -4784.708058 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.142 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.10148 -41.34990 -40.10473 -39.29384 -38.95081 -38.18714 -37.88266 -37.01730 -34.98071 -33.10389 -31.60653 -31.48594 -29.60538 -28.59034 -27.05480 -26.75441 -26.64748 -25.61222 -23.82206 -23.42176 -22.63714 -21.66772 -20.71912 -19.74583 -18.70748 -18.60817 -18.33884 -18.12553 -17.69346 -17.31240 -16.97031 -16.89749 -16.78439 -16.37850 -16.25378 -16.06647 -15.84821 -15.69597 -15.33094 -15.15018 -14.77579 -14.65846 -14.32443 -14.13458 -14.04005 -13.92682 -13.48892 -13.43105 -13.31956 -13.20014 -13.05232 -12.98768 -12.77575 -12.71055 -12.50149 -12.41729 -12.30098 -12.10267 -12.07690 -11.84621 -11.69597 -11.47698 -11.44237 -10.78419 -10.60583 -10.39374 -10.14888 -9.97703 -9.53734 -4.99724 -0.46684 -0.18941 0.68738 1.23451 1.38957 1.54873 1.62821 1.94523 2.05230 2.11866 2.58838 2.80677 3.17769 3.40000 3.50755 3.53715 3.59316 3.64574 3.67799 3.71972 3.76858 3.86316 3.90134 3.91148 4.01491 4.22536 4.29088 4.35007 4.36354 4.41258 4.46861 4.49748 4.51489 4.57813 4.59729 4.65610 4.67425 4.68517 4.71855 4.74909 4.78033 4.84118 4.95949 4.97179 5.02277 5.08043 5.13297 5.19860 5.49445 5.83268 6.22474 6.23832 6.42114 6.88672 7.08720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.420 6.420 3 C 0.071 3.929 4 C -0.106 4.106 5 H 0.091 0.909 6 C -0.141 4.141 7 C 0.116 3.884 8 H 0.091 0.909 9 N -0.700 5.700 10 C 0.516 3.484 11 O -0.563 6.563 12 C 0.071 3.929 13 C -0.160 4.160 14 O -0.306 6.306 15 C 0.054 3.946 16 C -0.024 4.024 17 Cl -0.051 7.051 18 C -0.157 4.157 19 C -0.031 4.031 20 C -0.070 4.070 21 O -0.557 6.557 22 Si 0.763 3.237 23 C -0.158 4.158 24 C 0.133 3.867 25 O -0.309 6.309 26 C 0.011 3.989 27 C -0.119 4.119 28 H 0.089 0.911 29 H 0.050 0.950 30 H 0.050 0.950 31 H 0.062 0.938 32 H 0.063 0.937 33 H 0.098 0.902 34 H 0.055 0.945 35 H 0.418 0.582 36 H 0.099 0.901 37 H 0.080 0.920 38 H 0.060 0.940 39 H 0.102 0.898 40 H 0.131 0.869 41 H 0.112 0.888 42 H 0.408 0.592 43 H -0.294 1.294 44 H -0.292 1.292 45 H 0.173 0.827 46 H 0.074 0.926 47 H 0.069 0.931 48 H 0.121 0.879 49 H 0.085 0.915 50 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.312 10.209 -5.839 12.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.340 6.340 3 C -0.005 4.005 4 C -0.125 4.125 5 H 0.109 0.891 6 C -0.180 4.180 7 C 0.012 3.988 8 H 0.109 0.891 9 N -0.353 5.353 10 C 0.302 3.698 11 O -0.440 6.440 12 C 0.012 3.988 13 C -0.217 4.217 14 O -0.222 6.222 15 C 0.008 3.992 16 C -0.052 4.052 17 Cl -0.022 7.022 18 C -0.176 4.176 19 C -0.031 4.031 20 C -0.180 4.180 21 O -0.367 6.367 22 Si 0.670 3.330 23 C -0.177 4.177 24 C 0.086 3.914 25 O -0.222 6.222 26 C -0.083 4.083 27 C -0.157 4.157 28 H 0.108 0.892 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.080 0.920 32 H 0.082 0.918 33 H 0.117 0.883 34 H 0.074 0.926 35 H 0.256 0.744 36 H 0.117 0.883 37 H 0.099 0.901 38 H 0.079 0.921 39 H 0.120 0.880 40 H 0.149 0.851 41 H 0.129 0.871 42 H 0.260 0.740 43 H -0.222 1.222 44 H -0.219 1.219 45 H 0.190 0.810 46 H 0.093 0.907 47 H 0.088 0.912 48 H 0.139 0.861 49 H 0.103 0.897 50 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -3.001 8.407 -4.531 10.010 hybrid contribution -0.475 -0.155 0.150 0.522 sum -3.476 8.252 -4.381 9.968 Atomic orbital electron populations 1.22886 0.79735 1.03549 1.00869 1.87862 1.21207 1.29323 1.95609 1.22618 0.92328 0.84297 1.01307 1.22285 0.93518 0.98893 0.97834 0.89066 1.23523 0.97110 0.99843 0.97493 1.22499 0.95881 0.90516 0.89929 0.89066 1.45748 1.18790 1.28964 1.41842 1.20599 0.81685 0.86136 0.81375 1.90733 1.54382 1.34286 1.64614 1.22378 0.84091 0.97298 0.94985 1.22246 0.98182 1.04026 0.97261 1.86252 1.26367 1.28408 1.81196 1.17723 0.97177 0.94184 0.90117 1.21054 0.99983 0.97193 0.86922 1.98405 1.97544 1.88681 1.17563 1.20751 1.01597 0.98222 0.96988 1.19460 0.96290 0.95918 0.91461 1.24646 0.97006 0.86637 1.09717 1.86423 1.36927 1.24162 1.89206 0.94526 0.78327 0.84349 0.75824 1.21381 0.97185 0.96476 1.02654 1.19196 0.91305 0.91908 0.89016 1.86227 1.56359 1.57823 1.21809 1.23525 1.04517 1.01274 0.78995 1.23303 0.95792 0.97073 0.99499 0.89246 0.93134 0.93102 0.91976 0.91835 0.88314 0.92644 0.74402 0.88307 0.90087 0.92063 0.87981 0.85124 0.87076 0.73969 1.22209 1.21906 0.80966 0.90725 0.91208 0.86082 0.89661 0.86799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 113.37 1.25 1.23 16 2 O -0.42 -1.99 10.70 -148.98 -1.59 -3.58 16 3 C 0.07 -0.06 5.78 71.98 0.42 0.35 16 4 C -0.11 0.04 4.01 -10.27 -0.04 0.00 16 5 H 0.09 0.21 8.14 -2.38 -0.02 0.19 16 6 C -0.14 -0.20 7.43 31.12 0.23 0.03 16 7 C 0.12 0.23 4.24 45.52 0.19 0.42 16 8 H 0.09 0.72 7.46 -2.39 -0.02 0.70 16 9 N -0.70 -0.60 5.25 -440.03 -2.31 -2.90 16 10 C 0.52 4.68 7.23 87.66 0.63 5.32 16 11 O -0.56 -11.03 16.10 16.00 0.26 -10.77 16 12 C 0.07 0.42 3.20 29.85 0.10 0.52 16 13 C -0.16 -0.01 9.00 71.98 0.65 0.63 16 14 O -0.31 -3.94 8.48 -67.36 -0.57 -4.51 16 15 C 0.05 0.54 5.56 22.58 0.13 0.67 16 16 C -0.02 -0.25 6.33 22.40 0.14 -0.11 16 17 Cl -0.05 -0.62 28.50 -2.72 -0.08 -0.70 16 18 C -0.16 -1.17 8.45 22.30 0.19 -0.99 16 19 C -0.03 -0.10 5.38 -19.86 -0.11 -0.20 16 20 C -0.07 0.26 2.79 71.24 0.20 0.46 16 21 O -0.56 2.70 12.81 -148.98 -1.91 0.79 16 22 Si 0.76 -2.14 29.84 68.60 2.05 -0.09 16 23 C -0.16 -0.24 8.68 22.35 0.19 -0.05 16 24 C 0.13 0.72 6.54 22.56 0.15 0.86 16 25 O -0.31 -0.92 8.19 -79.70 -0.65 -1.57 16 26 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 27 C -0.12 0.47 7.39 31.12 0.23 0.70 16 28 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 31 H 0.06 -0.19 8.14 -2.38 -0.02 -0.21 16 32 H 0.06 -0.23 7.85 -2.39 -0.02 -0.25 16 33 H 0.10 -0.12 7.90 -2.39 -0.02 -0.14 16 34 H 0.05 0.32 8.14 -2.39 -0.02 0.31 16 35 H 0.42 -2.79 8.15 -92.71 -0.76 -3.54 16 36 H 0.10 0.28 7.91 -2.39 -0.02 0.26 16 37 H 0.08 0.00 6.28 -2.39 -0.02 -0.01 16 38 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 39 H 0.10 -0.68 7.57 -2.39 -0.02 -0.70 16 40 H 0.13 0.96 4.85 -2.91 -0.01 0.94 16 41 H 0.11 -1.01 7.96 -2.38 -0.02 -1.03 16 42 H 0.41 -6.23 8.74 -74.06 -0.65 -6.88 16 43 H -0.29 -1.48 7.04 99.48 0.70 -0.78 16 44 H -0.29 -1.17 7.11 99.48 0.71 -0.46 16 45 H 0.17 -0.75 6.30 -2.91 -0.02 -0.77 16 46 H 0.07 -0.62 7.66 -2.39 -0.02 -0.64 16 47 H 0.07 -0.52 7.66 -2.39 -0.02 -0.53 16 48 H 0.12 -1.05 8.14 -2.38 -0.02 -1.07 16 49 H 0.08 -0.35 8.14 -2.39 -0.02 -0.36 16 50 H 0.11 -0.98 8.08 -2.39 -0.02 -1.00 16 Total: 0.00 -29.24 424.50 0.46 -28.78 By element: Atomic # 1 Polarization: -15.95 SS G_CDS: -0.38 Total: -16.33 kcal Atomic # 6 Polarization: 5.23 SS G_CDS: 5.66 Total: 10.88 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -2.31 Total: -2.90 kcal Atomic # 8 Polarization: -15.17 SS G_CDS: -4.47 Total: -19.64 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: 2.05 Total: -0.09 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -0.08 Total: -0.70 kcal Total: -29.24 0.46 -28.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.224 kcal (2) G-P(sol) polarization free energy of solvation -29.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds