Wall clock time and date at job start Sat Mar 6 2021 20:48:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42903 * 114.00080 * 2 1 4 4 C 1.52995 * 109.47023 * 180.02562 * 3 2 1 5 5 H 1.09003 * 112.91108 * 316.25559 * 4 3 2 6 6 C 1.53784 * 113.61472 * 87.50209 * 4 3 2 7 7 C 1.53781 * 87.07982 * 139.98163 * 6 4 3 8 8 H 1.08994 * 113.69257 * 89.13516 * 7 6 4 9 9 N 1.46506 * 113.61087 * 220.02323 * 7 6 4 10 10 C 1.34783 * 119.99531 * 252.49537 * 9 7 6 11 11 O 1.21692 * 120.00161 * 0.02562 * 10 9 7 12 12 C 1.46678 * 119.99704 * 180.02562 * 10 9 7 13 13 C 1.37870 * 126.23328 * 179.97438 * 12 10 9 14 14 C 1.50696 * 126.45722 * 0.02562 * 13 12 10 15 15 C 1.39838 * 107.08469 * 180.02562 * 13 12 10 16 16 C 1.35447 * 107.86646 * 0.02562 * 15 13 12 17 17 C 1.50700 * 125.56708 * 180.02562 * 16 15 13 18 18 O 1.42899 * 109.47483 * 119.97538 * 17 16 15 19 19 Si 1.86303 * 109.46973 * 359.97438 * 17 16 15 20 20 N 1.35537 * 108.87313 * 0.02562 * 16 15 13 21 21 C 1.53782 * 113.61550 * 185.00164 * 4 3 2 22 22 H 1.08992 * 109.47491 * 59.99477 * 1 2 3 23 23 H 1.08999 * 109.47529 * 180.02562 * 1 2 3 24 24 H 1.09008 * 109.46685 * 299.99516 * 1 2 3 25 25 H 1.08995 * 109.46678 * 60.00443 * 3 2 1 26 26 H 1.08997 * 109.46742 * 300.00235 * 3 2 1 27 27 H 1.09005 * 113.61095 * 25.43261 * 6 4 3 28 28 H 1.08998 * 113.61718 * 254.53001 * 6 4 3 29 29 H 0.96997 * 120.00100 * 72.49956 * 9 7 6 30 30 H 1.09009 * 109.46770 * 89.99550 * 14 13 12 31 31 H 1.09000 * 109.47361 * 209.99744 * 14 13 12 32 32 H 1.08996 * 109.47260 * 330.00292 * 14 13 12 33 33 H 1.07996 * 126.06666 * 179.97438 * 15 13 12 34 34 H 1.08999 * 109.47416 * 239.97889 * 17 16 15 35 35 H 0.96703 * 114.00042 * 300.00511 * 18 17 16 36 36 H 1.48503 * 109.99909 * 58.67832 * 19 17 16 37 37 H 1.48492 * 110.00210 * 180.02562 * 19 17 16 38 38 H 0.97000 * 125.67610 * 180.26654 * 20 16 15 39 39 H 1.08996 * 113.61416 * 105.47397 * 21 4 3 40 40 H 1.09005 * 113.60931 * 334.56757 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1846 -0.0006 5 1 3.9014 0.4279 0.6933 6 6 4.1441 1.0750 -1.4086 7 6 5.2672 1.9994 -0.9095 8 1 6.1073 1.4668 -0.4641 9 7 5.6857 2.9993 -1.8952 10 6 6.8746 2.8752 -2.5178 11 8 7.6002 1.9325 -2.2617 12 6 7.2939 3.8766 -3.5042 13 6 8.4762 3.8767 -4.2133 14 6 9.5761 2.8507 -4.1207 15 6 8.4625 5.0083 -5.0348 16 6 7.2981 5.6653 -4.8176 17 6 6.8714 6.9408 -5.4974 18 8 5.6528 6.7166 -6.2091 19 14 8.1965 7.4823 -6.6898 20 7 6.5794 4.9885 -3.8890 21 6 4.2605 2.5352 0.1222 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 1.6887 1.8463 0.8900 26 1 1.6886 1.8463 -0.8900 27 1 3.5255 1.5207 -2.1876 28 1 4.4847 0.0706 -1.6601 29 1 5.1072 3.7506 -2.0996 30 1 9.3937 2.0562 -4.8444 31 1 10.5340 3.3246 -4.3349 32 1 9.5959 2.4291 -3.1157 33 1 9.2422 5.3059 -5.7201 34 1 6.7172 7.7177 -4.7485 35 1 5.7163 6.0361 -6.8933 36 1 8.4388 6.4184 -7.6971 37 1 7.7881 8.7395 -7.3663 38 1 5.7048 5.2425 -3.5550 39 1 4.6951 2.7096 1.1064 40 1 3.6736 3.3801 -0.2384 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:48:54 Heat of formation + Delta-G solvation = -47.967839 kcal Electronic energy + Delta-G solvation = -21891.783390 eV Core-core repulsion = 18481.628956 eV Total energy + Delta-G solvation = -3410.154435 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.59258 -41.01983 -39.48881 -38.22182 -37.88883 -34.85522 -33.38205 -31.71251 -29.75935 -28.14399 -27.31616 -26.86736 -26.49684 -23.87432 -22.15457 -21.53828 -21.16991 -20.18214 -19.45483 -18.18251 -17.71602 -17.22281 -16.90758 -16.75185 -16.48059 -16.10938 -15.83428 -15.65829 -15.39157 -14.95728 -14.70692 -14.31410 -13.97689 -13.88382 -13.63149 -13.57997 -13.47490 -13.28659 -13.04379 -12.90884 -12.47628 -12.24889 -12.12999 -11.89157 -11.76815 -11.47371 -11.07151 -10.79811 -10.65072 -10.13676 -9.82116 -9.15804 -4.99366 0.36781 1.09662 1.55080 1.58850 1.81434 2.02849 2.15083 2.36327 2.71453 3.16730 3.34596 3.48726 3.50084 3.70967 3.79703 3.82107 4.15615 4.19331 4.22464 4.26122 4.35458 4.37268 4.44640 4.46930 4.53401 4.63594 4.72194 4.73403 4.75341 4.85174 4.92082 4.99531 5.03747 5.16994 5.22787 5.40232 5.48781 5.66122 5.91389 6.14749 6.18397 6.25036 6.45027 7.15720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.106 4.106 5 H 0.106 0.894 6 C -0.144 4.144 7 C 0.125 3.875 8 H 0.121 0.879 9 N -0.723 5.723 10 C 0.591 3.409 11 O -0.520 6.520 12 C -0.056 4.056 13 C -0.063 4.063 14 C -0.094 4.094 15 C -0.199 4.199 16 C 0.027 3.973 17 C -0.061 4.061 18 O -0.535 6.535 19 Si 0.717 3.283 20 N -0.525 5.525 21 C -0.138 4.138 22 H 0.041 0.959 23 H 0.087 0.913 24 H 0.042 0.958 25 H 0.052 0.948 26 H 0.049 0.951 27 H 0.083 0.917 28 H 0.078 0.922 29 H 0.394 0.606 30 H 0.068 0.932 31 H 0.066 0.934 32 H 0.081 0.919 33 H 0.151 0.849 34 H 0.120 0.880 35 H 0.380 0.620 36 H -0.255 1.255 37 H -0.255 1.255 38 H 0.416 0.584 39 H 0.082 0.918 40 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.603 3.680 0.717 4.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.125 4.125 5 H 0.124 0.876 6 C -0.183 4.183 7 C 0.020 3.980 8 H 0.139 0.861 9 N -0.374 5.374 10 C 0.379 3.621 11 O -0.396 6.396 12 C -0.169 4.169 13 C -0.072 4.072 14 C -0.151 4.151 15 C -0.224 4.224 16 C -0.091 4.091 17 C -0.170 4.170 18 O -0.341 6.341 19 Si 0.616 3.384 20 N -0.121 5.121 21 C -0.177 4.177 22 H 0.059 0.941 23 H 0.106 0.894 24 H 0.060 0.940 25 H 0.070 0.930 26 H 0.067 0.933 27 H 0.102 0.898 28 H 0.096 0.904 29 H 0.227 0.773 30 H 0.087 0.913 31 H 0.085 0.915 32 H 0.100 0.900 33 H 0.168 0.832 34 H 0.138 0.862 35 H 0.228 0.772 36 H -0.179 1.179 37 H -0.180 1.180 38 H 0.253 0.747 39 H 0.101 0.899 40 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.127 3.463 0.568 3.686 hybrid contribution -2.057 0.092 -0.320 2.083 sum -3.184 3.554 0.248 4.778 Atomic orbital electron populations 1.22766 0.80782 1.03060 0.99997 1.87902 1.19843 1.27724 1.95395 1.22507 0.92803 0.84971 1.00161 1.22335 0.93133 0.98335 0.98717 0.87613 1.23534 0.97080 1.01052 0.96592 1.22544 0.96448 0.89939 0.89037 0.86073 1.45887 1.19837 1.28489 1.43155 1.17068 0.81041 0.84274 0.79689 1.90839 1.53040 1.31698 1.64025 1.20257 0.96557 0.93302 1.06811 1.19947 0.94336 0.96918 0.95991 1.20398 0.94642 0.96135 1.03889 1.20608 0.98432 0.97613 1.05753 1.21033 0.94223 0.97595 0.96255 1.24909 0.95941 0.94916 1.01277 1.86590 1.32165 1.62232 1.53143 0.94231 0.83844 0.80499 0.79847 1.41846 1.17770 1.19846 1.32670 1.23371 0.97073 0.97103 1.00128 0.94065 0.89405 0.93983 0.93022 0.93257 0.89799 0.90363 0.77277 0.91295 0.91507 0.89981 0.83191 0.86214 0.77152 1.17867 1.18028 0.74675 0.89939 0.89502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.76 10.70 -35.23 -0.38 -1.14 16 3 C 0.07 -0.03 5.78 37.15 0.21 0.18 16 4 C -0.11 0.10 4.01 -89.81 -0.36 -0.26 16 5 H 0.11 -0.03 8.14 -51.93 -0.42 -0.46 16 6 C -0.14 0.04 7.43 -25.92 -0.19 -0.16 16 7 C 0.12 -0.05 4.24 -67.11 -0.28 -0.33 16 8 H 0.12 0.14 7.46 -51.93 -0.39 -0.24 16 9 N -0.72 0.35 5.35 -54.32 -0.29 0.06 16 10 C 0.59 1.55 7.79 -12.85 -0.10 1.45 16 11 O -0.52 -3.08 14.40 5.20 0.07 -3.01 16 12 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 13 C -0.06 -0.14 6.21 -104.16 -0.65 -0.78 16 14 C -0.09 -0.17 9.83 36.00 0.35 0.18 16 15 C -0.20 -0.07 9.27 -39.98 -0.37 -0.44 16 16 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 17 C -0.06 0.10 3.08 36.01 0.11 0.21 16 18 O -0.53 0.26 12.88 -35.23 -0.45 -0.20 16 19 Si 0.72 -1.52 30.54 -169.99 -5.19 -6.71 16 20 N -0.52 0.37 5.99 -5.70 -0.03 0.34 16 21 C -0.14 0.32 7.39 -25.92 -0.19 0.12 16 22 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 23 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.04 -0.06 8.14 -51.92 -0.42 -0.48 16 25 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.05 -0.06 7.84 -51.93 -0.41 -0.47 16 27 H 0.08 -0.05 7.90 -51.93 -0.41 -0.46 16 28 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.39 -1.22 7.86 -40.82 -0.32 -1.54 16 30 H 0.07 0.12 8.14 -51.92 -0.42 -0.30 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.08 0.28 6.48 -51.93 -0.34 -0.06 16 33 H 0.15 -0.23 6.17 -52.49 -0.32 -0.55 16 34 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 35 H 0.38 -1.07 8.70 45.56 0.40 -0.67 16 36 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 37 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 38 H 0.42 -1.28 8.19 -40.82 -0.33 -1.61 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.09 -0.30 8.08 -51.93 -0.42 -0.72 16 LS Contribution 333.56 15.07 5.03 5.03 Total: 0.00 -7.56 333.56 -8.67 -16.22 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -5.96 Total: -10.64 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -1.46 Total: 0.05 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.32 Total: 0.40 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.76 Total: -4.34 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.19 Total: -6.71 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -7.56 -8.67 -16.22 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.743 kcal (2) G-P(sol) polarization free energy of solvation -7.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds