Wall clock time and date at job start Sat Mar 6 2021 20:49:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99766 * 2 1 4 4 C 1.53000 * 109.47043 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.84949 * 45.33633 * 4 3 2 6 6 C 1.53781 * 113.61707 * 176.53192 * 4 3 2 7 7 C 1.53777 * 87.08336 * 140.06298 * 6 4 3 8 8 H 1.09008 * 113.61204 * 89.11878 * 7 6 4 9 9 N 1.46492 * 113.61596 * 219.93501 * 7 6 4 10 10 C 1.34774 * 120.00245 * 205.00267 * 9 7 6 11 11 O 1.21287 * 119.99850 * 0.02562 * 10 9 7 12 12 C 1.50702 * 120.00455 * 179.97438 * 10 9 7 13 13 O 1.42904 * 109.47263 * 179.97438 * 12 10 9 14 14 C 1.35904 * 116.99905 * 179.97438 * 13 12 10 15 15 C 1.38738 * 120.05512 * 359.72981 * 14 13 12 16 16 C 1.38141 * 119.94147 * 179.74051 * 15 14 13 17 17 C 1.38270 * 120.05492 * 0.50959 * 16 15 14 18 18 C 1.50704 * 119.94209 * 179.74318 * 17 16 15 19 19 O 1.42900 * 109.46733 * 120.02033 * 18 17 16 20 20 Si 1.86306 * 109.47111 * 0.02562 * 18 17 16 21 21 C 1.38261 * 120.11005 * 359.76625 * 17 16 15 22 22 C 1.38145 * 120.05821 * 359.97438 * 21 17 16 23 23 C 1.53775 * 87.07992 * 334.56762 * 7 6 4 24 24 H 1.09007 * 109.47022 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47132 * 299.99594 * 1 2 3 26 26 H 1.08996 * 109.47289 * 60.00008 * 1 2 3 27 27 H 1.09001 * 109.46793 * 60.00463 * 3 2 1 28 28 H 1.08992 * 109.47352 * 300.00400 * 3 2 1 29 29 H 1.08997 * 113.61673 * 254.61847 * 6 4 3 30 30 H 1.09005 * 113.61396 * 25.51675 * 6 4 3 31 31 H 0.97005 * 120.00166 * 24.99923 * 9 7 6 32 32 H 1.09005 * 109.47006 * 300.00170 * 12 10 9 33 33 H 1.09004 * 109.46891 * 59.99671 * 12 10 9 34 34 H 1.07998 * 120.02892 * 359.97438 * 15 14 13 35 35 H 1.08003 * 119.97179 * 180.27599 * 16 15 14 36 36 H 1.08998 * 109.47059 * 240.02303 * 18 17 16 37 37 H 0.96700 * 114.00423 * 299.99705 * 19 18 17 38 38 H 1.48501 * 110.00183 * 58.67747 * 20 18 17 39 39 H 1.48493 * 109.99730 * 180.02562 * 20 18 17 40 40 H 1.08006 * 119.96911 * 179.97438 * 21 17 16 41 41 H 1.08002 * 120.02393 * 180.02562 * 22 21 17 42 42 H 1.08993 * 113.61636 * 270.87622 * 23 7 6 43 43 H 1.09008 * 113.61006 * 139.97865 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9013 0.4475 -0.7154 6 6 4.2605 2.5381 -0.0859 7 6 5.2672 1.9739 0.9305 8 1 6.1066 1.4525 0.4703 9 7 5.6872 2.9466 1.9422 10 6 6.8763 2.8047 2.5607 11 8 7.5987 1.8720 2.2793 12 6 7.3087 3.8056 3.6010 13 8 8.5945 3.4412 4.1071 14 6 9.1332 4.2464 5.0603 15 6 8.4410 5.3673 5.4953 16 6 8.9884 6.1812 6.4681 17 6 10.2297 5.8853 7.0006 18 6 10.8270 6.7781 8.0576 19 8 11.0510 6.0216 9.2490 20 14 9.6541 8.1787 8.4228 21 6 10.9240 4.7720 6.5646 22 6 10.3786 3.9519 5.5958 23 6 4.1441 1.0362 1.4037 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 1.6886 1.8463 0.8901 28 1 1.6885 1.8464 -0.8899 29 1 4.6950 2.7398 -1.0650 30 1 3.6738 3.3728 0.2979 31 1 5.1096 3.6928 2.1670 32 1 7.3625 4.7971 3.1511 33 1 6.5867 3.8159 4.4176 34 1 7.4735 5.6013 5.0766 35 1 8.4480 7.0514 6.8104 36 1 11.7743 7.1813 7.6997 37 1 10.2494 5.6321 9.6243 38 1 8.3479 7.6411 8.8813 39 1 10.2318 9.0668 9.4632 40 1 11.8936 4.5432 6.9818 41 1 10.9212 3.0822 5.2559 42 1 3.5256 1.4601 2.1948 43 1 4.4847 0.0251 1.6273 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:49:09 Heat of formation + Delta-G solvation = -91.274191 kcal Electronic energy + Delta-G solvation = -24193.604591 eV Core-core repulsion = 20400.089831 eV Total energy + Delta-G solvation = -3793.514761 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.64479 -41.04743 -39.86478 -38.95077 -38.18394 -37.20436 -34.74277 -32.43144 -31.77342 -30.38287 -29.11380 -27.03949 -26.72284 -26.23154 -24.30612 -23.40055 -22.32417 -21.70034 -20.74784 -19.54329 -18.50589 -18.14577 -17.70686 -17.48205 -17.25805 -16.89992 -16.87521 -16.41684 -16.17765 -16.02447 -15.65696 -15.56959 -15.42815 -14.87748 -14.66545 -14.32243 -14.12440 -13.73582 -13.63979 -13.54891 -13.44613 -13.30328 -13.07006 -12.49867 -12.27153 -12.18034 -12.14414 -12.11285 -11.78853 -11.64289 -11.49036 -10.88918 -10.66129 -10.59765 -10.16246 -10.05657 -9.23849 -4.98962 0.27134 0.28385 1.27599 1.41683 1.44481 1.56780 1.94842 2.49615 2.63918 2.71667 3.30241 3.37227 3.43298 3.48782 3.66006 3.68520 3.71250 3.78350 3.84543 3.85947 3.87412 4.19881 4.24594 4.24959 4.34808 4.41805 4.43502 4.45880 4.51811 4.52632 4.62326 4.64111 4.70227 4.72912 4.89617 4.93603 4.97852 5.13333 5.14684 5.23337 5.41972 5.48581 5.66596 6.13877 6.20587 6.34864 6.40793 7.06103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.137 4.137 7 C 0.124 3.876 8 H 0.120 0.880 9 N -0.718 5.718 10 C 0.516 3.484 11 O -0.511 6.511 12 C 0.040 3.960 13 O -0.288 6.288 14 C 0.134 3.866 15 C -0.207 4.207 16 C -0.075 4.075 17 C -0.156 4.156 18 C -0.070 4.070 19 O -0.530 6.530 20 Si 0.682 3.318 21 C -0.051 4.051 22 C -0.145 4.145 23 C -0.144 4.144 24 H 0.087 0.913 25 H 0.041 0.959 26 H 0.042 0.958 27 H 0.050 0.950 28 H 0.052 0.948 29 H 0.082 0.918 30 H 0.089 0.911 31 H 0.402 0.598 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.135 0.865 41 H 0.136 0.864 42 H 0.086 0.914 43 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.835 5.106 -2.186 8.056 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.175 4.175 7 C 0.019 3.981 8 H 0.138 0.862 9 N -0.371 5.371 10 C 0.301 3.699 11 O -0.385 6.385 12 C -0.039 4.039 13 O -0.200 6.200 14 C 0.089 3.911 15 C -0.225 4.225 16 C -0.093 4.093 17 C -0.156 4.156 18 C -0.180 4.180 19 O -0.337 6.337 20 Si 0.583 3.417 21 C -0.069 4.069 22 C -0.164 4.164 23 C -0.183 4.183 24 H 0.106 0.894 25 H 0.060 0.940 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.101 0.899 30 H 0.108 0.892 31 H 0.237 0.763 32 H 0.114 0.886 33 H 0.112 0.888 34 H 0.149 0.851 35 H 0.147 0.853 36 H 0.136 0.864 37 H 0.223 0.777 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.153 0.847 41 H 0.154 0.846 42 H 0.104 0.896 43 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -4.962 4.659 -1.980 7.089 hybrid contribution -0.973 -0.207 0.794 1.273 sum -5.936 4.452 -1.186 7.514 Atomic orbital electron populations 1.22768 0.80756 1.03068 1.00010 1.87902 1.19864 1.27747 1.95400 1.22502 0.92751 0.84969 1.00211 1.22335 0.93195 0.98286 0.98796 0.87685 1.23367 0.96972 0.97072 1.00127 1.22561 0.96441 0.90361 0.88691 0.86243 1.45806 1.19560 1.30217 1.41493 1.20079 0.81595 0.86157 0.82078 1.90791 1.52685 1.31946 1.63044 1.22490 0.85729 0.98483 0.97232 1.86181 1.32230 1.49234 1.52372 1.19086 0.93215 0.89848 0.88968 1.21166 1.01861 0.97005 1.02498 1.20782 0.94536 0.98294 0.95654 1.20202 0.95819 0.98680 1.00925 1.24959 1.08572 0.99832 0.84630 1.86599 1.36658 1.69719 1.40698 0.95129 0.77190 0.80537 0.88813 1.20863 0.99481 0.92592 0.93959 1.20540 0.94109 1.02357 0.99392 1.23530 0.97014 1.00978 0.96737 0.89418 0.94038 0.93972 0.93177 0.93008 0.89943 0.89242 0.76296 0.88604 0.88769 0.85065 0.85264 0.86424 0.77671 1.18600 1.18248 0.84740 0.84616 0.89592 0.90407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 101.05 1.11 1.08 16 2 O -0.39 -0.60 10.70 -35.23 -0.38 -0.98 16 3 C 0.07 -0.08 5.77 37.16 0.21 0.14 16 4 C -0.11 0.16 4.01 -89.81 -0.36 -0.20 16 5 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 6 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 7 C 0.12 -0.15 4.24 -67.13 -0.28 -0.43 16 8 H 0.12 0.09 7.46 -51.92 -0.39 -0.29 16 9 N -0.72 1.49 5.36 -53.02 -0.28 1.21 16 10 C 0.52 0.58 7.91 -10.99 -0.09 0.49 16 11 O -0.51 -3.22 16.10 -14.36 -0.23 -3.45 16 12 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 13 O -0.29 -0.76 9.67 -39.35 -0.38 -1.14 16 14 C 0.13 0.21 6.69 -39.22 -0.26 -0.05 16 15 C -0.21 0.12 9.04 -39.43 -0.36 -0.24 16 16 C -0.08 0.06 8.66 -39.61 -0.34 -0.29 16 17 C -0.16 -0.02 5.39 -104.60 -0.56 -0.58 16 18 C -0.07 0.02 2.82 36.01 0.10 0.12 16 19 O -0.53 -0.67 12.77 -35.23 -0.45 -1.12 16 20 Si 0.68 -0.82 29.78 -169.99 -5.06 -5.88 16 21 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 22 C -0.15 -0.24 9.99 -39.44 -0.39 -0.63 16 23 C -0.14 0.14 7.43 -25.92 -0.19 -0.05 16 24 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 25 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.05 -0.10 7.88 -51.93 -0.41 -0.51 16 28 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 30 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 31 H 0.40 -2.19 8.73 -40.82 -0.36 -2.55 16 32 H 0.10 -0.39 7.65 -51.93 -0.40 -0.78 16 33 H 0.09 -0.35 7.68 -51.93 -0.40 -0.75 16 34 H 0.13 -0.44 6.30 -52.49 -0.33 -0.78 16 35 H 0.13 -0.35 4.87 -52.48 -0.26 -0.61 16 36 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 37 H 0.38 -0.56 8.70 45.56 0.40 -0.16 16 38 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 39 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 40 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 41 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 42 H 0.09 -0.14 7.92 -51.93 -0.41 -0.55 16 43 H 0.08 0.04 8.14 -51.92 -0.42 -0.38 16 LS Contribution 360.10 15.07 5.43 5.43 Total: 0.00 -9.68 360.10 -9.54 -19.22 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -6.39 Total: -12.59 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.80 Total: -0.70 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -0.28 Total: 1.21 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.44 Total: -6.69 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.06 Total: -5.88 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.68 -9.54 -19.22 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.050 kcal (2) G-P(sol) polarization free energy of solvation -9.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.731 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds