Wall clock time and date at job start Sat Mar 6 2021 20:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42898 * 113.99766 * 2 1 4 4 C 1.53000 * 109.47043 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.84949 * 45.33633 * 4 3 2 6 6 C 1.53781 * 113.61707 * 176.53192 * 4 3 2 7 7 C 1.53777 * 87.08336 * 140.06298 * 6 4 3 8 8 H 1.09008 * 113.61204 * 89.11878 * 7 6 4 9 9 N 1.46492 * 113.61596 * 219.93501 * 7 6 4 10 10 C 1.34774 * 120.00245 * 205.00267 * 9 7 6 11 11 O 1.21287 * 119.99850 * 0.02562 * 10 9 7 12 12 C 1.50702 * 120.00455 * 179.97438 * 10 9 7 13 13 O 1.42904 * 109.47263 * 179.97438 * 12 10 9 14 14 C 1.35995 * 116.99768 * 180.02562 * 13 12 10 15 15 C 1.39151 * 120.07108 * 179.72735 * 14 13 12 16 16 O 1.35997 * 120.07452 * 359.97438 * 15 14 13 17 17 C 1.42901 * 116.99883 * 179.97438 * 16 15 14 18 18 C 1.38567 * 119.85493 * 179.74253 * 15 14 13 19 19 C 1.38247 * 119.99714 * 0.52692 * 18 15 14 20 20 C 1.50700 * 119.92618 * 179.74444 * 19 18 15 21 21 O 1.42900 * 109.47015 * 254.98127 * 20 19 18 22 22 Si 1.86297 * 109.47283 * 14.98085 * 20 19 18 23 23 C 1.38261 * 120.14610 * 359.72699 * 19 18 15 24 24 N 1.47997 * 119.92642 * 180.02562 * 23 19 18 25 25 O 1.21804 * 120.00162 * 180.02562 * 24 23 19 26 26 O 1.21801 * 119.99859 * 0.02562 * 24 23 19 27 27 C 1.38245 * 120.14271 * 0.02562 * 23 19 18 28 28 C 1.53775 * 87.07992 * 334.56762 * 7 6 4 29 29 H 1.09007 * 109.47022 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47132 * 299.99594 * 1 2 3 31 31 H 1.08996 * 109.47289 * 60.00008 * 1 2 3 32 32 H 1.09001 * 109.46793 * 60.00463 * 3 2 1 33 33 H 1.08992 * 109.47352 * 300.00400 * 3 2 1 34 34 H 1.08997 * 113.61673 * 254.61847 * 6 4 3 35 35 H 1.09005 * 113.61396 * 25.51675 * 6 4 3 36 36 H 0.97005 * 120.00166 * 24.99923 * 9 7 6 37 37 H 1.09005 * 109.47006 * 300.00170 * 12 10 9 38 38 H 1.09004 * 109.46891 * 59.99671 * 12 10 9 39 39 H 1.09006 * 109.46283 * 180.02562 * 17 16 15 40 40 H 1.09000 * 109.47191 * 299.99899 * 17 16 15 41 41 H 1.08994 * 109.46721 * 60.00609 * 17 16 15 42 42 H 1.07996 * 120.00250 * 180.25239 * 18 15 14 43 43 H 1.08997 * 109.46819 * 134.98120 * 20 19 18 44 44 H 0.96696 * 114.00233 * 59.99771 * 21 20 19 45 45 H 1.48490 * 109.99984 * 180.02562 * 22 20 19 46 46 H 1.48506 * 109.99779 * 301.31813 * 22 20 19 47 47 H 1.07998 * 119.99280 * 179.97438 * 27 23 19 48 48 H 1.08993 * 113.61636 * 270.87622 * 28 7 6 49 49 H 1.09008 * 113.61006 * 139.97865 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9013 0.4475 -0.7154 6 6 4.2605 2.5381 -0.0859 7 6 5.2672 1.9739 0.9305 8 1 6.1066 1.4525 0.4703 9 7 5.6872 2.9466 1.9422 10 6 6.8763 2.8047 2.5607 11 8 7.5987 1.8720 2.2793 12 6 7.3087 3.8056 3.6010 13 8 8.5945 3.4412 4.1071 14 6 9.1331 4.2464 5.0617 15 6 10.3797 3.9482 5.6032 16 8 11.0620 2.8507 5.1794 17 6 12.3360 2.6072 5.7792 18 6 10.9266 4.7746 6.5717 19 6 10.2291 5.8864 7.0058 20 6 10.8228 6.7809 8.0634 21 8 10.1605 6.5509 9.3085 22 14 12.6382 6.4050 8.2470 23 6 8.9881 6.1798 6.4715 24 7 8.2458 7.3716 6.9394 25 8 7.1522 7.6311 6.4700 26 8 8.7285 8.0931 7.7938 27 6 8.4391 5.3622 5.5013 28 6 4.1441 1.0362 1.4037 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 1.6886 1.8463 0.8901 33 1 1.6885 1.8464 -0.8899 34 1 4.6950 2.7398 -1.0650 35 1 3.6738 3.3728 0.2979 36 1 5.1096 3.6928 2.1670 37 1 7.3625 4.7971 3.1511 38 1 6.5867 3.8159 4.4176 39 1 12.7718 1.7040 5.3521 40 1 12.9954 3.4539 5.5881 41 1 12.2126 2.4782 6.8545 42 1 11.8958 4.5477 6.9907 43 1 10.6954 7.8232 7.7711 44 1 10.2324 5.6419 9.6303 45 1 13.2354 7.2801 9.2875 46 1 12.8269 4.9785 8.6143 47 1 7.4694 5.5934 5.0859 48 1 3.5256 1.4601 2.1948 49 1 4.4847 0.0251 1.6273 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12906260_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:49:33 Heat of formation + Delta-G solvation = -113.239629 kcal Electronic energy + Delta-G solvation = -35417.975241 eV Core-core repulsion = 30318.271741 eV Total energy + Delta-G solvation = -5099.703500 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.38718 -42.12616 -41.33771 -40.22349 -39.42700 -39.19569 -38.19231 -37.71905 -37.23404 -34.79384 -32.69992 -32.55663 -30.44794 -29.23048 -28.72720 -27.92084 -26.94435 -26.60240 -25.82869 -24.18403 -23.41992 -23.05345 -21.77473 -20.78224 -20.70178 -19.82839 -19.54457 -18.77068 -18.65394 -18.42039 -17.77481 -17.72284 -17.60935 -17.36547 -17.06687 -16.90142 -16.78977 -16.49322 -16.20752 -16.00093 -15.88468 -15.55518 -15.42777 -15.02127 -14.78633 -14.47741 -14.12567 -13.84463 -13.77959 -13.46952 -13.45699 -13.21613 -13.07372 -13.00036 -12.70274 -12.50011 -12.48127 -12.41863 -12.36652 -12.24637 -12.11522 -12.08535 -11.70817 -11.67287 -11.41957 -11.04572 -10.65271 -10.59840 -10.48960 -10.15493 -9.50192 -5.00691 -1.35265 -0.44398 0.17358 0.31431 1.13045 1.24856 1.36846 1.46122 1.86645 1.88011 1.93324 2.34323 2.81103 2.97260 3.16319 3.25442 3.40556 3.43053 3.47465 3.52929 3.61032 3.77357 3.87378 3.89377 3.93142 3.96902 4.05354 4.09038 4.24556 4.31042 4.31278 4.37168 4.37946 4.48177 4.52700 4.59204 4.59263 4.70661 4.71110 4.75642 4.76559 4.81543 4.84941 4.99037 5.04964 5.20788 5.27455 5.49056 5.58899 6.03896 6.23779 6.39780 6.42458 6.49368 7.07618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.420 6.420 3 C 0.069 3.931 4 C -0.109 4.109 5 H 0.092 0.908 6 C -0.118 4.118 7 C 0.119 3.881 8 H 0.095 0.905 9 N -0.698 5.698 10 C 0.516 3.484 11 O -0.569 6.569 12 C 0.027 3.973 13 O -0.291 6.291 14 C 0.102 3.898 15 C 0.169 3.831 16 O -0.307 6.307 17 C -0.001 4.001 18 C -0.172 4.172 19 C -0.034 4.034 20 C -0.102 4.102 21 O -0.529 6.529 22 Si 0.775 3.225 23 C -0.043 4.043 24 N 0.036 4.964 25 O -0.187 6.187 26 O -0.163 6.163 27 C -0.109 4.109 28 C -0.143 4.143 29 H 0.089 0.911 30 H 0.050 0.950 31 H 0.050 0.950 32 H 0.063 0.937 33 H 0.061 0.939 34 H 0.087 0.913 35 H 0.114 0.886 36 H 0.422 0.578 37 H 0.132 0.868 38 H 0.127 0.873 39 H 0.122 0.878 40 H 0.089 0.911 41 H 0.074 0.926 42 H 0.187 0.813 43 H 0.129 0.871 44 H 0.383 0.617 45 H -0.294 1.294 46 H -0.250 1.250 47 H 0.185 0.815 48 H 0.097 0.903 49 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.520 0.119 -3.122 3.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.340 6.340 3 C -0.007 4.007 4 C -0.128 4.128 5 H 0.110 0.890 6 C -0.156 4.156 7 C 0.014 3.986 8 H 0.113 0.887 9 N -0.352 5.352 10 C 0.302 3.698 11 O -0.447 6.447 12 C -0.051 4.051 13 O -0.204 6.204 14 C 0.054 3.946 15 C 0.120 3.880 16 O -0.219 6.219 17 C -0.094 4.094 18 C -0.191 4.191 19 C -0.036 4.036 20 C -0.209 4.209 21 O -0.336 6.336 22 Si 0.676 3.324 23 C -0.127 4.127 24 N 0.549 4.451 25 O -0.397 6.397 26 O -0.377 6.377 27 C -0.128 4.128 28 C -0.182 4.182 29 H 0.107 0.893 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.106 0.894 35 H 0.132 0.868 36 H 0.261 0.739 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.140 0.860 40 H 0.108 0.892 41 H 0.093 0.907 42 H 0.204 0.796 43 H 0.146 0.854 44 H 0.232 0.768 45 H -0.222 1.222 46 H -0.175 1.175 47 H 0.202 0.798 48 H 0.115 0.885 49 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 1.977 -1.247 -3.333 4.071 hybrid contribution -1.658 0.299 1.133 2.031 sum 0.318 -0.948 -2.200 2.416 Atomic orbital electron populations 1.22883 0.79787 1.03523 1.00846 1.87860 1.21147 1.29387 1.95608 1.22634 0.92550 0.84258 1.01258 1.22304 0.93365 0.99108 0.97977 0.89016 1.23302 0.95775 0.96781 0.99753 1.22487 0.95902 0.90809 0.89400 0.88664 1.45678 1.18812 1.30326 1.40338 1.20396 0.81756 0.85621 0.82068 1.90782 1.54512 1.34349 1.65018 1.22935 0.84593 0.99447 0.98107 1.86307 1.34129 1.48462 1.51509 1.17955 0.92048 0.91510 0.93047 1.18681 0.89510 0.87741 0.92077 1.86330 1.34049 1.39620 1.61875 1.23747 0.80849 1.05141 0.99666 1.21216 1.03181 0.94718 0.99962 1.20095 0.91324 0.95694 0.96511 1.25777 1.09739 1.02989 0.82389 1.86771 1.76055 1.34899 1.35875 0.94242 0.71925 0.78503 0.87777 1.20533 0.95852 0.91253 1.05055 1.43685 1.00505 1.01872 0.99004 1.94505 1.07564 1.77848 1.59819 1.94578 1.70518 1.47769 1.24847 1.20906 1.02564 0.92636 0.96712 1.23531 0.97282 0.99879 0.97530 0.89280 0.93164 0.93138 0.91923 0.92047 0.89441 0.86810 0.73928 0.85079 0.85538 0.85954 0.89228 0.90729 0.79642 0.85351 0.76813 1.22170 1.17549 0.79835 0.88487 0.92628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 11.01 113.37 1.25 1.20 16 2 O -0.42 -1.44 10.70 -148.98 -1.59 -3.03 16 3 C 0.07 -0.17 5.77 71.98 0.42 0.24 16 4 C -0.11 0.31 4.01 -10.27 -0.04 0.27 16 5 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 6 C -0.12 0.85 7.39 31.12 0.23 1.08 16 7 C 0.12 -0.27 4.24 45.52 0.19 -0.08 16 8 H 0.10 0.30 7.46 -2.38 -0.02 0.28 16 9 N -0.70 3.54 5.36 -440.05 -2.36 1.18 16 10 C 0.52 0.83 7.91 87.66 0.69 1.52 16 11 O -0.57 -7.55 16.10 15.98 0.26 -7.30 16 12 C 0.03 -0.12 5.22 71.24 0.37 0.25 16 13 O -0.29 -1.01 9.46 -67.08 -0.63 -1.64 16 14 C 0.10 0.07 6.70 22.57 0.15 0.22 16 15 C 0.17 -0.07 6.70 22.57 0.15 0.08 16 16 O -0.31 -0.23 10.28 -79.65 -0.82 -1.05 16 17 C 0.00 0.01 9.81 113.37 1.11 1.12 16 18 C -0.17 0.74 7.65 22.35 0.17 0.91 16 19 C -0.03 0.02 5.26 -19.86 -0.10 -0.08 16 20 C -0.10 0.02 1.74 71.24 0.12 0.14 16 21 O -0.53 -1.72 11.80 -129.64 -1.53 -3.25 16 22 Si 0.77 -4.31 30.24 68.60 2.07 -2.24 16 23 C -0.04 -0.12 6.85 36.39 0.25 0.13 16 24 N 0.04 0.31 4.45 -46.46 -0.21 0.10 16 25 O -0.19 -1.83 18.44 18.88 0.35 -1.48 16 26 O -0.16 -1.92 14.62 25.10 0.37 -1.55 16 27 C -0.11 0.11 8.54 22.35 0.19 0.30 16 28 C -0.14 0.21 7.43 31.12 0.23 0.44 16 29 H 0.09 -0.24 8.14 -2.38 -0.02 -0.26 16 30 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 31 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.06 -0.32 7.88 -2.39 -0.02 -0.34 16 33 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 35 H 0.11 -1.32 8.08 -2.38 -0.02 -1.34 16 36 H 0.42 -5.40 8.73 -92.70 -0.81 -6.21 16 37 H 0.13 -1.43 7.67 -2.38 -0.02 -1.45 16 38 H 0.13 -1.29 7.66 -2.38 -0.02 -1.31 16 39 H 0.12 -1.23 8.14 -2.38 -0.02 -1.25 16 40 H 0.09 -1.14 7.65 -2.39 -0.02 -1.16 16 41 H 0.07 -0.80 7.67 -2.39 -0.02 -0.82 16 42 H 0.19 -1.80 3.09 -2.91 -0.01 -1.81 16 43 H 0.13 0.29 6.07 -2.39 -0.01 0.28 16 44 H 0.38 -1.64 8.70 -74.06 -0.64 -2.29 16 45 H -0.29 -0.84 7.11 99.48 0.71 -0.14 16 46 H -0.25 1.63 6.68 99.48 0.66 2.29 16 47 H 0.18 -1.05 5.85 -2.91 -0.02 -1.07 16 48 H 0.10 -0.36 7.92 -2.39 -0.02 -0.38 16 49 H 0.05 0.17 8.14 -2.38 -0.02 0.15 16 Total: 0.00 -31.63 411.03 0.87 -30.76 By element: Atomic # 1 Polarization: -17.83 SS G_CDS: -0.43 Total: -18.26 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: 5.39 Total: 7.75 kcal Atomic # 7 Polarization: 3.85 SS G_CDS: -2.56 Total: 1.28 kcal Atomic # 8 Polarization: -15.70 SS G_CDS: -3.60 Total: -19.30 kcal Atomic # 14 Polarization: -4.31 SS G_CDS: 2.07 Total: -2.24 kcal Total: -31.63 0.87 -30.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.481 kcal (2) G-P(sol) polarization free energy of solvation -31.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.758 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds