Wall clock time and date at job start Sat Mar 6 2021 20:50:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42902 * 114.00196 * 2 1 4 4 C 1.52997 * 109.47355 * 180.02562 * 3 2 1 5 5 H 1.09004 * 112.90305 * 316.25104 * 4 3 2 6 6 C 1.53778 * 113.61789 * 87.50269 * 4 3 2 7 7 C 1.53781 * 87.08237 * 139.98447 * 6 4 3 8 8 H 1.08991 * 113.69045 * 89.12873 * 7 6 4 9 9 N 1.46504 * 113.60966 * 220.02075 * 7 6 4 10 10 C 1.34770 * 119.99792 * 252.49369 * 9 7 6 11 11 O 1.21287 * 120.00316 * 0.02562 * 10 9 7 12 12 C 1.50706 * 119.99790 * 180.02562 * 10 9 7 13 13 O 1.42906 * 109.46775 * 180.02562 * 12 10 9 14 14 C 1.35998 * 116.99536 * 180.02562 * 13 12 10 15 15 C 1.39154 * 120.07027 * 180.02562 * 14 13 12 16 16 O 1.35992 * 120.07493 * 359.97109 * 15 14 13 17 17 C 1.42899 * 117.00142 * 179.97438 * 16 15 14 18 18 C 1.38564 * 119.85088 * 179.70036 * 15 14 13 19 19 C 1.38240 * 120.00327 * 0.52367 * 18 15 14 20 20 C 1.50699 * 119.92985 * 179.76891 * 19 18 15 21 21 O 1.42901 * 109.46830 * 299.72648 * 20 19 18 22 22 Si 1.86298 * 109.46950 * 179.73085 * 20 19 18 23 23 C 1.38258 * 120.14267 * 359.49893 * 19 18 15 24 24 C 1.38241 * 120.14553 * 0.22300 * 23 19 18 25 25 C 1.53779 * 113.61801 * 185.00307 * 4 3 2 26 26 H 1.08996 * 109.47371 * 180.02562 * 1 2 3 27 27 H 1.09005 * 109.47137 * 300.00148 * 1 2 3 28 28 H 1.09004 * 109.47009 * 59.99563 * 1 2 3 29 29 H 1.09002 * 109.47066 * 59.99925 * 3 2 1 30 30 H 1.09004 * 109.47330 * 300.00056 * 3 2 1 31 31 H 1.09005 * 113.61340 * 25.43263 * 6 4 3 32 32 H 1.09002 * 113.61677 * 254.53184 * 6 4 3 33 33 H 0.96995 * 119.99990 * 72.49955 * 9 7 6 34 34 H 1.09001 * 109.47376 * 60.00149 * 12 10 9 35 35 H 1.08990 * 109.46932 * 299.99999 * 12 10 9 36 36 H 1.08995 * 109.47531 * 300.00274 * 17 16 15 37 37 H 1.08998 * 109.46907 * 60.00490 * 17 16 15 38 38 H 1.09007 * 109.47004 * 180.02562 * 17 16 15 39 39 H 1.08000 * 120.00126 * 180.27617 * 18 15 14 40 40 H 1.08991 * 109.47351 * 59.72796 * 20 19 18 41 41 H 0.96708 * 114.00246 * 299.99864 * 21 20 19 42 42 H 1.48506 * 109.99834 * 180.02562 * 22 20 19 43 43 H 1.48502 * 110.00011 * 301.31529 * 22 20 19 44 44 H 1.07994 * 119.92574 * 180.25269 * 23 19 18 45 45 H 1.07997 * 119.99840 * 179.97438 * 24 23 19 46 46 H 1.09003 * 113.61636 * 105.46938 * 25 4 3 47 47 H 1.09004 * 113.68721 * 334.57804 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9013 0.4280 0.6934 6 6 4.1442 1.0751 -1.4085 7 6 5.2672 1.9995 -0.9094 8 1 6.1072 1.4668 -0.4638 9 7 5.6857 2.9993 -1.8951 10 6 6.8746 2.8752 -2.5176 11 8 7.5978 1.9356 -2.2623 12 6 7.3054 3.9041 -3.5311 13 8 8.5913 3.5547 -4.0474 14 6 9.1290 4.3862 -4.9796 15 6 10.3780 4.1067 -5.5257 16 8 11.0639 3.0018 -5.1280 17 6 12.3396 2.7779 -5.7317 18 6 10.9188 4.9536 -6.4798 19 6 10.2226 6.0791 -6.8792 20 6 10.8146 7.0019 -7.9131 21 8 12.0564 7.5211 -7.4329 22 14 9.6370 8.4087 -8.2369 23 6 8.9819 6.3571 -6.3362 24 6 8.4341 5.5132 -5.3882 25 6 4.2605 2.5352 0.1222 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 1.6886 1.8464 0.8900 30 1 1.6886 1.8464 -0.8900 31 1 3.5256 1.5208 -2.1876 32 1 4.4848 0.0707 -1.6600 33 1 5.1073 3.7506 -2.0995 34 1 7.3584 4.8832 -3.0550 35 1 6.5830 3.9353 -4.3467 36 1 12.2183 2.6749 -6.8100 37 1 12.9954 3.6221 -5.5188 38 1 12.7780 1.8657 -5.3269 39 1 11.8860 4.7366 -6.9085 40 1 10.9847 6.4503 -8.8376 41 1 11.9805 8.0248 -6.6108 42 1 10.2091 9.3257 -9.2554 43 1 8.3312 7.8801 -8.7065 44 1 8.4393 7.2352 -6.6538 45 1 7.4649 5.7328 -4.9654 46 1 4.6950 2.7096 1.1065 47 1 3.6747 3.3811 -0.2378 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:00 Heat of formation + Delta-G solvation = -122.172485 kcal Electronic energy + Delta-G solvation = -28622.552460 eV Core-core repulsion = 24353.478037 eV Total energy + Delta-G solvation = -4269.074422 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.79877 -41.20844 -40.00715 -39.09040 -38.82960 -38.14557 -36.91764 -34.68461 -32.04724 -31.46286 -30.29141 -29.08074 -28.40283 -26.99932 -26.69417 -26.18393 -24.04638 -23.13824 -22.45540 -21.64695 -20.71364 -19.76244 -18.57172 -18.29657 -17.89289 -17.65628 -17.49907 -17.23121 -16.98507 -16.86961 -16.58705 -16.10739 -16.04374 -15.96610 -15.69696 -15.61046 -15.32144 -15.16383 -14.65204 -14.26742 -14.08493 -13.73212 -13.61948 -13.60909 -13.49436 -13.27599 -13.04011 -12.64640 -12.51130 -12.45908 -12.17861 -12.12287 -12.06101 -12.00816 -11.75493 -11.73607 -11.46394 -10.82006 -10.63947 -10.47886 -10.10899 -9.78257 -8.84383 -5.07464 0.17955 0.30024 1.25911 1.46672 1.51514 1.59395 1.93758 2.32736 2.52478 2.57782 2.74378 3.34021 3.40702 3.47083 3.52155 3.63520 3.71347 3.77148 3.80096 3.81415 3.93401 3.94117 4.12942 4.22071 4.26386 4.27421 4.30128 4.35117 4.36611 4.45250 4.48051 4.48464 4.54893 4.57427 4.65318 4.66204 4.73466 4.74461 4.92959 5.00094 5.00982 5.10117 5.18474 5.37060 5.45804 5.56145 5.97599 6.16066 6.35233 6.53826 6.55826 7.13189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.107 4.107 5 H 0.105 0.895 6 C -0.144 4.144 7 C 0.124 3.876 8 H 0.120 0.880 9 N -0.719 5.719 10 C 0.516 3.484 11 O -0.508 6.508 12 C 0.038 3.962 13 O -0.277 6.277 14 C 0.104 3.896 15 C 0.107 3.893 16 O -0.301 6.301 17 C 0.025 3.975 18 C -0.146 4.146 19 C -0.115 4.115 20 C -0.066 4.066 21 O -0.541 6.541 22 Si 0.691 3.309 23 C -0.114 4.114 24 C -0.169 4.169 25 C -0.137 4.137 26 H 0.087 0.913 27 H 0.042 0.958 28 H 0.041 0.959 29 H 0.052 0.948 30 H 0.050 0.950 31 H 0.086 0.914 32 H 0.077 0.923 33 H 0.402 0.598 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.055 0.945 37 H 0.057 0.943 38 H 0.103 0.897 39 H 0.141 0.859 40 H 0.113 0.887 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.258 1.258 44 H 0.132 0.868 45 H 0.139 0.861 46 H 0.082 0.918 47 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.849 5.634 1.609 7.606 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.126 4.126 5 H 0.123 0.877 6 C -0.183 4.183 7 C 0.020 3.980 8 H 0.137 0.863 9 N -0.372 5.372 10 C 0.301 3.699 11 O -0.381 6.381 12 C -0.041 4.041 13 O -0.189 6.189 14 C 0.058 3.942 15 C 0.061 3.939 16 O -0.214 6.214 17 C -0.070 4.070 18 C -0.165 4.165 19 C -0.116 4.116 20 C -0.177 4.177 21 O -0.346 6.346 22 Si 0.593 3.407 23 C -0.132 4.132 24 C -0.188 4.188 25 C -0.175 4.175 26 H 0.106 0.894 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.104 0.896 32 H 0.096 0.904 33 H 0.237 0.763 34 H 0.113 0.887 35 H 0.111 0.889 36 H 0.074 0.926 37 H 0.076 0.924 38 H 0.121 0.879 39 H 0.158 0.842 40 H 0.131 0.869 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.183 1.183 44 H 0.149 0.851 45 H 0.157 0.843 46 H 0.100 0.900 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -4.410 4.558 0.877 6.403 hybrid contribution -0.404 0.238 -0.469 0.663 sum -4.814 4.796 0.407 6.807 Atomic orbital electron populations 1.22765 0.80779 1.03052 1.00001 1.87902 1.19850 1.27774 1.95397 1.22511 0.92768 0.84949 1.00199 1.22337 0.93165 0.98387 0.98723 0.87675 1.23543 0.97059 1.01045 0.96656 1.22550 0.96418 0.89971 0.89064 0.86255 1.45804 1.19582 1.28857 1.42937 1.20067 0.81574 0.86508 0.81784 1.90800 1.52547 1.32077 1.62712 1.22495 0.85922 0.98346 0.97322 1.86286 1.31938 1.47223 1.53450 1.18285 0.91759 0.91578 0.92567 1.18285 0.90581 0.89114 0.95892 1.86250 1.31907 1.40123 1.63167 1.23132 0.82752 1.02774 0.98362 1.20932 1.01563 0.95177 0.98841 1.20039 0.95184 0.96784 0.99607 1.25035 0.93176 1.02070 0.97410 1.86499 1.29281 1.73307 1.45515 0.94696 0.77300 0.80849 0.87836 1.20684 0.95277 0.99686 0.97554 1.20986 1.01200 0.95111 1.01518 1.23367 0.96991 0.97127 1.00054 0.89431 0.93985 0.94042 0.93018 0.93170 0.89595 0.90425 0.76345 0.88720 0.88860 0.92633 0.92411 0.87860 0.84166 0.86931 0.77312 1.18009 1.18259 0.85074 0.84312 0.89975 0.89254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.68 10.70 -35.23 -0.38 -1.05 16 3 C 0.07 -0.06 5.78 37.16 0.21 0.15 16 4 C -0.11 0.13 4.01 -89.81 -0.36 -0.23 16 5 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 6 C -0.14 0.09 7.43 -25.92 -0.19 -0.10 16 7 C 0.12 -0.10 4.24 -67.12 -0.28 -0.39 16 8 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 9 N -0.72 1.19 5.35 -53.02 -0.28 0.90 16 10 C 0.52 0.92 7.91 -10.99 -0.09 0.83 16 11 O -0.51 -3.64 16.10 -14.36 -0.23 -3.87 16 12 C 0.04 -0.02 5.22 36.01 0.19 0.16 16 13 O -0.28 -1.11 9.46 -47.36 -0.45 -1.56 16 14 C 0.10 0.29 6.70 -39.12 -0.26 0.02 16 15 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 16 O -0.30 -1.37 10.28 -34.22 -0.35 -1.72 16 17 C 0.02 0.01 9.81 101.05 0.99 1.00 16 18 C -0.15 -0.24 8.60 -39.46 -0.34 -0.58 16 19 C -0.12 -0.04 5.39 -104.61 -0.56 -0.61 16 20 C -0.07 0.02 2.82 36.01 0.10 0.12 16 21 O -0.54 -0.02 12.77 -35.23 -0.45 -0.47 16 22 Si 0.69 -1.02 29.78 -169.99 -5.06 -6.08 16 23 C -0.11 0.08 8.66 -39.57 -0.34 -0.27 16 24 C -0.17 0.05 9.04 -39.46 -0.36 -0.30 16 25 C -0.14 0.39 7.39 -25.92 -0.19 0.20 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.05 -0.09 7.84 -51.93 -0.41 -0.50 16 31 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.40 -2.06 8.73 -40.82 -0.36 -2.41 16 34 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 35 H 0.09 -0.31 7.67 -51.93 -0.40 -0.71 16 36 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 37 H 0.06 -0.04 7.67 -51.93 -0.40 -0.43 16 38 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 39 H 0.14 0.10 6.30 -52.49 -0.33 -0.23 16 40 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 41 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 42 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 43 H -0.26 -0.18 7.11 56.52 0.40 0.23 16 44 H 0.13 -0.38 4.87 -52.49 -0.26 -0.63 16 45 H 0.14 -0.49 6.30 -52.49 -0.33 -0.82 16 46 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 LS Contribution 389.29 15.07 5.87 5.87 Total: 0.00 -11.48 389.29 -9.06 -20.54 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -7.09 Total: -13.79 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -0.63 Total: 1.23 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.28 Total: 0.90 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -1.86 Total: -8.67 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.48 -9.06 -20.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.634 kcal (2) G-P(sol) polarization free energy of solvation -11.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds