Wall clock time and date at job start Sat Mar 6 2021 20:50:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42911 * 1 3 3 C 1.42893 * 113.99910 * 2 1 4 4 C 1.53003 * 109.46828 * 179.97438 * 3 2 1 5 5 H 1.08997 * 112.85150 * 316.19675 * 4 3 2 6 6 C 1.53958 * 113.74107 * 87.40661 * 4 3 2 7 7 C 1.53785 * 87.01795 * 139.94265 * 6 4 3 8 8 H 1.08998 * 113.61376 * 89.23291 * 7 6 4 9 9 N 1.46500 * 113.61106 * 220.04708 * 7 6 4 10 10 C 1.34782 * 120.00088 * 254.13672 * 9 7 6 11 11 O 1.21703 * 119.99652 * 0.02562 * 10 9 7 12 12 C 1.46670 * 120.00039 * 179.97438 * 10 9 7 13 13 C 1.37877 * 126.23373 * 180.02562 * 12 10 9 14 14 C 1.39828 * 107.08726 * 180.02562 * 13 12 10 15 15 C 1.35449 * 107.86466 * 0.02562 * 14 13 12 16 16 C 1.50707 * 125.56210 * 180.02562 * 15 14 13 17 17 O 1.42903 * 109.46442 * 245.02004 * 16 15 14 18 18 Si 1.86293 * 109.47256 * 5.01570 * 16 15 14 19 19 N 1.35526 * 108.87513 * 0.25870 * 15 14 13 20 20 C 1.53781 * 87.17352 * 334.63733 * 7 6 4 21 21 H 1.09000 * 109.46600 * 59.99544 * 1 2 3 22 22 H 1.08995 * 109.46928 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.46637 * 300.00298 * 1 2 3 24 24 H 1.09004 * 109.47189 * 60.00028 * 3 2 1 25 25 H 1.08993 * 109.47851 * 300.00044 * 3 2 1 26 26 H 1.08994 * 113.61168 * 25.42345 * 6 4 3 27 27 H 1.08997 * 113.66287 * 254.47172 * 6 4 3 28 28 H 0.97000 * 120.00254 * 74.13947 * 9 7 6 29 29 H 1.08007 * 126.45263 * 0.02562 * 13 12 10 30 30 H 1.08007 * 126.06795 * 179.97438 * 14 13 12 31 31 H 1.08999 * 109.47345 * 125.02074 * 16 15 14 32 32 H 0.96700 * 114.00311 * 60.00230 * 17 16 15 33 33 H 1.48506 * 109.99973 * 180.02562 * 18 16 15 34 34 H 1.48493 * 110.00375 * 301.32185 * 18 16 15 35 35 H 0.97001 * 125.68359 * 179.70037 * 19 15 14 36 36 H 1.08998 * 113.61306 * 139.94516 * 20 7 6 37 37 H 1.09002 * 113.61508 * 270.75932 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 1 3.8999 0.4286 0.6962 6 6 4.1490 1.0717 -1.4069 7 6 5.2692 1.9983 -0.9054 8 1 6.1084 1.4660 -0.4576 9 7 5.6899 2.9971 -1.8912 10 6 6.8663 2.8559 -2.5338 11 8 7.5787 1.8983 -2.2955 12 6 7.2872 3.8555 -3.5211 13 6 8.4573 3.8385 -4.2501 14 6 8.4506 4.9752 -5.0644 15 6 7.3023 5.6520 -4.8237 16 6 6.8878 6.9393 -5.4887 17 8 6.8347 7.9831 -4.5141 18 14 8.1260 7.3837 -6.8077 19 7 6.5894 4.9854 -3.8835 20 6 4.2604 2.5352 0.1236 21 1 -0.3632 0.5139 -0.8900 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3632 0.5139 0.8900 24 1 1.6886 1.8463 0.8900 25 1 1.6887 1.8464 -0.8899 26 1 3.5325 1.5155 -2.1886 27 1 4.4916 0.0674 -1.6556 28 1 5.1220 3.7600 -2.0814 29 1 9.2330 3.0885 -4.2013 30 1 9.2242 5.2629 -5.7611 31 1 5.9040 6.8142 -5.9411 32 1 7.6773 8.1499 -4.0700 33 1 7.7289 8.6518 -7.4707 34 1 9.4773 7.5259 -6.2087 35 1 5.7294 5.2578 -3.5268 36 1 4.6930 2.7107 1.1085 37 1 3.6755 3.3807 -0.2385 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12906260_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:50:09 Heat of formation + Delta-G solvation = -42.428017 kcal Electronic energy + Delta-G solvation = -19887.507891 eV Core-core repulsion = 16633.131300 eV Total energy + Delta-G solvation = -3254.376591 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.130 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -42.53668 -41.02553 -39.49293 -38.21183 -37.87907 -34.74573 -32.18906 -31.44208 -29.74013 -27.32149 -26.88544 -26.54715 -24.17738 -22.54064 -21.50696 -21.35816 -20.76480 -19.71708 -18.21845 -17.73670 -17.23909 -16.89850 -16.76186 -16.41560 -16.12213 -15.84955 -15.67374 -15.18896 -15.03666 -14.60441 -14.36924 -14.00351 -13.94676 -13.68079 -13.63816 -13.28981 -13.05246 -12.49025 -12.38190 -12.14796 -11.92309 -11.78081 -11.48140 -11.18358 -10.87493 -10.65381 -10.16291 -10.08846 -9.28339 -4.99656 0.35103 1.08774 1.54733 1.57400 1.80727 2.00231 2.12836 2.37104 2.71172 3.17210 3.32973 3.48013 3.51312 3.69593 3.79066 3.79758 4.18997 4.21398 4.25678 4.26145 4.35345 4.39225 4.44539 4.46830 4.52831 4.62768 4.72075 4.73471 4.90290 4.99158 4.99711 5.07961 5.16876 5.42427 5.59226 5.81717 6.14591 6.17380 6.21096 6.41605 7.11880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.390 6.390 3 C 0.072 3.928 4 C -0.106 4.106 5 H 0.106 0.894 6 C -0.143 4.143 7 C 0.124 3.876 8 H 0.121 0.879 9 N -0.722 5.722 10 C 0.591 3.409 11 O -0.523 6.523 12 C -0.051 4.051 13 C -0.098 4.098 14 C -0.199 4.199 15 C 0.023 3.977 16 C -0.062 4.062 17 O -0.535 6.535 18 Si 0.719 3.281 19 N -0.524 5.524 20 C -0.138 4.138 21 H 0.041 0.959 22 H 0.088 0.912 23 H 0.042 0.958 24 H 0.051 0.949 25 H 0.049 0.951 26 H 0.084 0.916 27 H 0.078 0.922 28 H 0.394 0.606 29 H 0.153 0.847 30 H 0.151 0.849 31 H 0.119 0.881 32 H 0.381 0.619 33 H -0.256 1.256 34 H -0.255 1.255 35 H 0.416 0.584 36 H 0.082 0.918 37 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.291 2.580 -1.250 4.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.004 4.004 4 C -0.125 4.125 5 H 0.124 0.876 6 C -0.182 4.182 7 C 0.020 3.980 8 H 0.138 0.862 9 N -0.373 5.373 10 C 0.378 3.622 11 O -0.398 6.398 12 C -0.164 4.164 13 C -0.124 4.124 14 C -0.224 4.224 15 C -0.095 4.095 16 C -0.171 4.171 17 O -0.341 6.341 18 Si 0.617 3.383 19 N -0.120 5.120 20 C -0.176 4.176 21 H 0.059 0.941 22 H 0.106 0.894 23 H 0.060 0.940 24 H 0.070 0.930 25 H 0.068 0.932 26 H 0.103 0.897 27 H 0.097 0.903 28 H 0.228 0.772 29 H 0.171 0.829 30 H 0.168 0.832 31 H 0.137 0.863 32 H 0.229 0.771 33 H -0.181 1.181 34 H -0.179 1.179 35 H 0.253 0.747 36 H 0.101 0.899 37 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -2.839 2.335 -1.440 3.948 hybrid contribution -0.893 1.160 1.252 1.926 sum -3.732 3.495 -0.188 5.116 Atomic orbital electron populations 1.22768 0.80771 1.03066 0.99998 1.87903 1.19850 1.27708 1.95395 1.22502 0.92780 0.84983 1.00168 1.22364 0.93137 0.98269 0.98745 0.87624 1.23559 0.97004 1.01054 0.96586 1.22555 0.96449 0.89976 0.89061 0.86165 1.45885 1.21119 1.27607 1.42674 1.17096 0.80916 0.84453 0.79700 1.90877 1.53569 1.30872 1.64481 1.20488 0.97407 0.92140 1.06387 1.21346 0.96200 0.98786 0.96089 1.20741 0.98522 0.97818 1.05288 1.21085 0.94642 0.97420 0.96330 1.24907 1.11386 0.83072 0.97721 1.86595 1.37963 1.54346 1.55202 0.94202 0.76255 0.85475 0.82329 1.41946 1.19077 1.18739 1.32270 1.23361 0.97036 0.97140 1.00112 0.94056 0.89398 0.93985 0.93034 0.93229 0.89735 0.90298 0.77216 0.82917 0.83151 0.86312 0.77117 1.18063 1.17883 0.74685 0.89945 0.89465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.71 10.70 -35.23 -0.38 -1.09 16 3 C 0.07 -0.04 5.78 37.16 0.21 0.17 16 4 C -0.11 0.10 4.01 -89.71 -0.36 -0.25 16 5 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 6 C -0.14 0.05 7.45 -25.82 -0.19 -0.14 16 7 C 0.12 -0.05 4.21 -67.12 -0.28 -0.33 16 8 H 0.12 0.15 7.50 -51.93 -0.39 -0.24 16 9 N -0.72 0.44 5.36 -54.32 -0.29 0.15 16 10 C 0.59 1.52 7.79 -12.85 -0.10 1.42 16 11 O -0.52 -3.38 16.50 5.19 0.09 -3.29 16 12 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 13 C -0.10 -0.16 10.65 -39.12 -0.42 -0.58 16 14 C -0.20 0.02 9.32 -39.98 -0.37 -0.35 16 15 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 16 C -0.06 0.12 3.08 36.01 0.11 0.23 16 17 O -0.53 0.31 12.88 -35.23 -0.45 -0.14 16 18 Si 0.72 -1.68 30.56 -169.99 -5.19 -6.87 16 19 N -0.52 0.56 5.99 -5.70 -0.03 0.53 16 20 C -0.14 0.32 7.39 -25.92 -0.19 0.13 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 22 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.05 -0.07 7.86 -51.93 -0.41 -0.48 16 26 H 0.08 -0.07 7.91 -51.93 -0.41 -0.48 16 27 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 28 H 0.39 -1.32 7.84 -40.82 -0.32 -1.64 16 29 H 0.15 0.22 8.06 -52.48 -0.42 -0.20 16 30 H 0.15 -0.29 6.19 -52.48 -0.33 -0.61 16 31 H 0.12 -0.35 7.96 -51.93 -0.41 -0.76 16 32 H 0.38 -1.13 8.70 45.56 0.40 -0.73 16 33 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 34 H -0.25 0.05 7.11 56.52 0.40 0.45 16 35 H 0.42 -1.44 8.19 -40.82 -0.33 -1.77 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 37 H 0.09 -0.31 8.07 -51.93 -0.42 -0.73 16 LS Contribution 315.68 15.07 4.76 4.76 Total: 0.00 -7.92 315.68 -8.30 -16.22 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -5.20 Total: -10.45 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -1.59 Total: 0.20 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.33 Total: 0.68 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -0.75 Total: -4.53 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.19 Total: -6.87 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -7.92 -8.30 -16.22 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12906260_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.210 kcal (2) G-P(sol) polarization free energy of solvation -7.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.296 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.218 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds