Wall clock time and date at job start Sat Mar 6 2021 18:24:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81398 * 1 3 3 O 1.42104 * 108.58255 * 2 1 4 4 O 1.42108 * 108.57695 * 228.97579 * 2 1 3 5 5 C 1.81403 * 101.92393 * 114.49134 * 2 1 3 6 6 H 1.08997 * 112.90381 * 311.24935 * 5 2 1 7 7 C 1.53777 * 113.61378 * 82.49730 * 5 2 1 8 8 C 1.53782 * 87.08001 * 139.98367 * 7 5 2 9 9 H 1.08999 * 113.68864 * 220.00753 * 8 7 5 10 10 N 1.46496 * 113.61293 * 89.11960 * 8 7 5 11 11 C 1.34777 * 120.00266 * 107.50556 * 10 8 7 12 12 O 1.21274 * 120.00135 * 0.27234 * 11 10 8 13 13 C 1.50706 * 119.99766 * 179.97438 * 11 10 8 14 14 N 1.46500 * 109.46949 * 179.97438 * 13 11 10 15 15 C 1.36834 * 125.06163 * 264.70247 * 14 13 11 16 16 C 1.34242 * 109.93515 * 179.81283 * 15 14 13 17 17 C 1.50702 * 126.49676 * 180.16084 * 16 15 14 18 18 O 1.42906 * 109.46673 * 105.31465 * 17 16 15 19 19 Si 1.86298 * 109.47405 * 345.31958 * 17 16 15 20 20 C 1.46484 * 106.99899 * 0.43181 * 16 15 14 21 21 C 1.39595 * 134.03542 * 179.76367 * 20 16 15 22 22 C 1.36654 * 119.76611 * 179.97438 * 21 20 16 23 23 C 1.38790 * 120.52695 * 0.02562 * 22 21 20 24 24 C 1.37788 * 120.66998 * 359.97438 * 23 22 21 25 25 C 1.37688 * 125.06376 * 84.99942 * 14 13 11 26 26 C 1.53772 * 113.61682 * 179.97438 * 5 2 1 27 27 H 1.09001 * 109.46781 * 305.51356 * 1 2 3 28 28 H 1.09000 * 109.47009 * 65.50568 * 1 2 3 29 29 H 1.08996 * 109.47330 * 185.51469 * 1 2 3 30 30 H 1.09006 * 113.61677 * 25.43930 * 7 5 2 31 31 H 1.09003 * 113.61817 * 254.53087 * 7 5 2 32 32 H 0.96999 * 119.99691 * 287.49542 * 10 8 7 33 33 H 1.09000 * 109.47161 * 299.99737 * 13 11 10 34 34 H 1.09001 * 109.46740 * 59.99879 * 13 11 10 35 35 H 1.07998 * 125.03369 * 359.95307 * 15 14 13 36 36 H 1.08996 * 109.47124 * 225.31252 * 17 16 15 37 37 H 0.96703 * 113.99683 * 179.97438 * 18 17 16 38 38 H 1.48501 * 109.99915 * 298.67928 * 19 17 16 39 39 H 1.48501 * 110.00162 * 59.99815 * 19 17 16 40 40 H 1.08000 * 120.11528 * 359.97438 * 21 20 16 41 41 H 1.07999 * 119.73677 * 179.97438 * 22 21 20 42 42 H 1.08006 * 119.66445 * 179.97438 * 23 22 21 43 43 H 1.07990 * 120.11474 * 179.97438 * 24 23 22 44 44 H 1.09001 * 113.61879 * 105.47042 * 26 5 2 45 45 H 1.09005 * 113.61783 * 334.56564 * 26 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2667 -0.8842 -1.0163 5 6 2.1888 -0.7358 1.6152 6 1 1.6287 -0.2776 2.4303 7 6 2.1360 -2.2726 1.6191 8 6 3.3796 -2.2346 2.5231 9 1 4.1165 -3.0022 2.2867 10 7 3.0644 -2.1696 3.9522 11 6 3.2598 -3.2490 4.7353 12 8 3.7013 -4.2726 4.2577 13 6 2.9361 -3.1818 6.2056 14 7 3.2332 -4.4731 6.8305 15 6 2.3219 -5.4713 7.0439 16 6 2.9205 -6.5197 7.6311 17 6 2.2668 -7.8179 8.0290 18 8 2.6477 -8.8441 7.1102 19 14 0.4151 -7.6151 8.0005 20 6 4.3282 -6.1598 7.8178 21 6 5.4328 -6.8147 8.3651 22 6 6.6478 -6.1897 8.3911 23 6 6.7925 -4.9082 7.8782 24 6 5.7155 -4.2435 7.3334 25 6 4.4697 -4.8608 7.2958 26 6 3.6946 -0.8656 1.8985 27 1 -0.3633 0.5970 0.8365 28 1 -0.3633 0.4261 -0.9352 29 1 -0.3634 -1.0229 0.0988 30 1 2.3203 -2.7184 0.6416 31 1 1.2514 -2.6780 2.1103 32 1 2.7151 -1.3496 4.3350 33 1 3.5379 -2.4036 6.6750 34 1 1.8786 -2.9509 6.3346 35 1 1.2765 -5.4238 6.7773 36 1 2.5869 -8.0929 9.0339 37 1 2.2631 -9.7095 7.3057 38 1 0.0033 -6.5728 8.9748 39 1 -0.0339 -7.2402 6.6356 40 1 5.3276 -7.8118 8.7665 41 1 7.5020 -6.6966 8.8151 42 1 7.7591 -4.4272 7.9063 43 1 5.8382 -3.2464 6.9371 44 1 4.0687 -0.1346 2.6154 45 1 4.3049 -0.9268 0.9974 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12912156_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:24:56 Heat of formation + Delta-G solvation = -21.929825 kcal Electronic energy + Delta-G solvation = -30370.382398 eV Core-core repulsion = 26063.384930 eV Total energy + Delta-G solvation = -4306.997468 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.118 amu Computer time = 3.25 seconds Orbital eigenvalues (eV) -42.56062 -41.39417 -39.53917 -38.07920 -37.97228 -37.51612 -37.12300 -34.74334 -34.07380 -31.43901 -30.78242 -30.22604 -29.20862 -27.23197 -27.02558 -25.56040 -23.73739 -22.86481 -21.92679 -21.29264 -20.48333 -19.90307 -19.02614 -18.26193 -18.21818 -18.05765 -17.70884 -17.34556 -17.16366 -16.93784 -16.44822 -16.38347 -15.94844 -15.58122 -15.33269 -14.93643 -14.88424 -14.71078 -14.59252 -14.44284 -14.37386 -14.21797 -14.12488 -14.04509 -13.92582 -13.52465 -13.44254 -13.18347 -13.07624 -12.67877 -12.50926 -12.39792 -12.38243 -12.27203 -12.08576 -11.94846 -11.68192 -11.33854 -11.21617 -10.47941 -10.43853 -10.13446 -9.07672 -8.58855 -5.00787 -1.16999 0.21929 0.74185 1.23772 1.27537 1.32474 1.54008 1.60621 1.70479 1.93604 1.97663 2.33198 2.58782 2.90107 3.04764 3.12718 3.23057 3.32973 3.41911 3.47590 3.61094 3.66676 3.68578 3.74809 3.80496 3.82139 4.05600 4.15296 4.21763 4.28156 4.30819 4.32273 4.41016 4.43726 4.49624 4.52883 4.63757 4.66436 4.73124 4.85650 4.94542 5.15598 5.20995 5.60053 5.75041 5.80539 5.84645 6.01851 6.21260 6.30940 6.79899 6.86580 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.654 4.654 2 S 2.426 3.574 3 O -0.937 6.937 4 O -0.932 6.932 5 C -0.612 4.612 6 H 0.151 0.849 7 C -0.126 4.126 8 C 0.132 3.868 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.493 3.507 12 O -0.504 6.504 13 C 0.093 3.907 14 N -0.467 5.467 15 C 0.063 3.937 16 C -0.149 4.149 17 C -0.033 4.033 18 O -0.545 6.545 19 Si 0.683 3.317 20 C -0.085 4.085 21 C -0.063 4.063 22 C -0.145 4.145 23 C -0.095 4.095 24 C -0.128 4.128 25 C 0.109 3.891 26 C -0.112 4.112 27 H 0.127 0.873 28 H 0.131 0.869 29 H 0.129 0.871 30 H 0.118 0.882 31 H 0.089 0.911 32 H 0.403 0.597 33 H 0.121 0.879 34 H 0.121 0.879 35 H 0.162 0.838 36 H 0.070 0.930 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.255 1.255 40 H 0.124 0.876 41 H 0.125 0.875 42 H 0.126 0.874 43 H 0.115 0.885 44 H 0.096 0.904 45 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.270 1.205 4.905 7.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.804 4.804 2 S 2.607 3.393 3 O -0.934 6.934 4 O -0.929 6.929 5 C -0.720 4.720 6 H 0.169 0.831 7 C -0.165 4.165 8 C 0.026 3.974 9 H 0.134 0.866 10 N -0.366 5.366 11 C 0.277 3.723 12 O -0.377 6.377 13 C -0.034 4.034 14 N -0.150 5.150 15 C -0.062 4.062 16 C -0.156 4.156 17 C -0.145 4.145 18 O -0.351 6.351 19 Si 0.584 3.416 20 C -0.090 4.090 21 C -0.081 4.081 22 C -0.164 4.164 23 C -0.114 4.114 24 C -0.148 4.148 25 C 0.005 3.995 26 C -0.151 4.151 27 H 0.146 0.854 28 H 0.149 0.851 29 H 0.148 0.852 30 H 0.136 0.864 31 H 0.108 0.892 32 H 0.238 0.762 33 H 0.139 0.861 34 H 0.139 0.861 35 H 0.179 0.821 36 H 0.088 0.912 37 H 0.225 0.775 38 H -0.181 1.181 39 H -0.179 1.179 40 H 0.142 0.858 41 H 0.142 0.858 42 H 0.144 0.856 43 H 0.133 0.867 44 H 0.114 0.886 45 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -4.808 2.082 3.350 6.219 hybrid contribution -0.516 0.703 0.689 1.111 sum -5.324 2.785 4.038 7.240 Atomic orbital electron populations 1.30236 1.26569 1.11653 1.11939 1.07768 0.78495 0.75604 0.77384 1.93619 1.79113 1.34250 1.86391 1.93626 1.79154 1.67112 1.53025 1.31814 1.07321 1.09028 1.23839 0.83138 1.23253 1.00753 0.89563 1.02953 1.21693 0.97529 0.98480 0.79728 0.86617 1.45590 1.67512 1.15150 1.08366 1.21049 0.78536 0.83860 0.88862 1.90845 1.42140 1.29857 1.74832 1.21567 1.04954 0.86073 0.90775 1.43133 1.07139 1.13586 1.51168 1.21390 0.94696 0.88584 1.01524 1.19539 0.92617 0.94826 1.08628 1.23943 1.09348 0.86829 0.94338 1.86576 1.74974 1.20469 1.53031 0.95228 0.76429 0.88996 0.80920 1.18929 0.93252 0.93433 1.03344 1.20289 0.91034 0.99199 0.97619 1.20681 0.97426 0.95605 1.02666 1.20842 0.97763 0.94971 0.97843 1.19952 0.89924 1.00255 1.04689 1.18168 0.86254 0.95011 1.00082 1.22987 0.90821 0.98092 1.03174 0.85383 0.85092 0.85240 0.86425 0.89211 0.76225 0.86149 0.86079 0.82099 0.91212 0.77526 1.18065 1.17936 0.85837 0.85751 0.85579 0.86664 0.88553 0.87141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 43. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 3.03 10.62 101.05 1.07 4.10 16 2 S 2.43 -4.82 5.34 -107.50 -0.57 -5.39 16 3 O -0.94 -2.06 18.10 -57.83 -1.05 -3.11 16 4 O -0.93 -1.78 17.19 -57.83 -0.99 -2.78 16 5 C -0.61 2.74 4.05 -25.93 -0.10 2.64 16 6 H 0.15 -1.13 8.14 -51.93 -0.42 -1.55 16 7 C -0.13 0.40 7.42 -25.92 -0.19 0.21 16 8 C 0.13 -0.28 4.32 -67.14 -0.29 -0.57 16 9 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 2.24 5.26 -53.04 -0.28 1.96 16 11 C 0.49 0.09 7.90 -10.98 -0.09 0.00 16 12 O -0.50 -2.86 16.02 5.56 0.09 -2.77 16 13 C 0.09 -0.18 6.48 -5.19 -0.03 -0.21 16 14 N -0.47 -1.16 2.27 -115.70 -0.26 -1.43 16 15 C 0.06 0.20 9.89 -16.73 -0.17 0.03 16 16 C -0.15 -0.63 5.61 -102.71 -0.58 -1.20 16 17 C -0.03 -0.05 3.05 36.01 0.11 0.06 16 18 O -0.54 -1.13 12.86 -35.23 -0.45 -1.58 16 19 Si 0.68 -0.53 30.78 -169.99 -5.23 -5.76 16 20 C -0.09 -0.44 6.35 -105.14 -0.67 -1.11 16 21 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 22 C -0.14 -0.39 9.97 -39.95 -0.40 -0.79 16 23 C -0.09 -0.23 10.01 -39.54 -0.40 -0.62 16 24 C -0.13 -0.37 10.00 -39.43 -0.39 -0.77 16 25 C 0.11 0.47 6.80 -83.99 -0.57 -0.10 16 26 C -0.11 0.37 7.41 -25.94 -0.19 0.18 16 27 H 0.13 -0.82 8.14 -51.92 -0.42 -1.24 16 28 H 0.13 -0.57 8.14 -51.92 -0.42 -0.99 16 29 H 0.13 -0.78 8.14 -51.93 -0.42 -1.20 16 30 H 0.12 -0.31 7.36 -51.93 -0.38 -0.70 16 31 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 32 H 0.40 -2.63 8.70 -40.82 -0.36 -2.98 16 33 H 0.12 -0.53 8.14 -51.93 -0.42 -0.96 16 34 H 0.12 -0.63 8.11 -51.93 -0.42 -1.05 16 35 H 0.16 0.18 6.30 -52.49 -0.33 -0.15 16 36 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 37 H 0.38 -1.28 8.74 45.56 0.40 -0.88 16 38 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 39 H -0.25 -0.52 7.05 56.52 0.40 -0.12 16 40 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 41 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 42 H 0.13 0.00 8.06 -52.48 -0.42 -0.42 16 43 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 44 H 0.10 -0.43 8.14 -51.93 -0.42 -0.86 16 45 H 0.11 -0.34 8.10 -51.93 -0.42 -0.77 16 LS Contribution 393.87 15.07 5.94 5.94 Total: 0.00 -17.63 393.87 -12.27 -29.89 By element: Atomic # 1 Polarization: -10.02 SS G_CDS: -6.16 Total: -16.19 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: -3.28 Total: 1.22 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.54 Total: 0.53 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -2.40 Total: -10.24 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.23 Total: -5.76 kcal Atomic # 16 Polarization: -4.82 SS G_CDS: -0.57 Total: -5.39 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -17.63 -12.27 -29.89 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12912156_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.962 kcal (2) G-P(sol) polarization free energy of solvation -17.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.892 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.25 seconds