Wall clock time and date at job start Sat Mar 6 2021 23:22:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35524 * 125.68051 * 2 1 4 4 C 1.35454 * 108.87498 * 179.97438 * 3 2 1 5 5 C 1.50701 * 126.07119 * 180.02562 * 4 3 2 6 6 O 1.42901 * 109.46723 * 299.99477 * 5 4 3 7 7 Si 1.86298 * 109.47046 * 179.97438 * 5 4 3 8 8 C 1.39844 * 107.86259 * 359.73780 * 4 3 2 9 9 C 1.37653 * 125.67383 * 179.97438 * 2 1 3 10 10 C 1.46680 * 126.23552 * 0.02605 * 9 2 1 11 11 O 1.21693 * 119.99863 * 173.78900 * 10 9 2 12 12 N 1.34776 * 119.99746 * 353.77569 * 10 9 2 13 13 C 1.46504 * 119.99738 * 174.06728 * 12 10 9 14 14 C 1.53002 * 109.47363 * 271.40902 * 13 12 10 15 15 C 1.50698 * 112.84669 * 305.25290 * 14 13 12 16 16 C 1.38242 * 119.99460 * 249.78371 * 15 14 13 17 17 C 1.38235 * 119.99668 * 179.79368 * 16 15 14 18 18 C 1.38237 * 120.00059 * 0.43171 * 17 16 15 19 19 C 1.38237 * 120.00053 * 359.82285 * 18 17 16 20 20 C 1.38232 * 119.99839 * 359.97219 * 19 18 17 21 21 C 1.53775 * 113.61588 * 174.05330 * 14 13 12 22 22 C 1.53785 * 87.08179 * 270.88116 * 21 14 13 23 23 H 1.08997 * 113.61505 * 219.92996 * 22 21 14 24 24 O 1.42909 * 113.61157 * 89.11414 * 22 21 14 25 25 C 1.53788 * 113.61539 * 76.44337 * 14 13 12 26 26 H 1.08998 * 109.47834 * 259.74993 * 1 2 3 27 27 H 1.09009 * 109.47288 * 19.74898 * 1 2 3 28 28 H 1.09005 * 109.47412 * 139.74318 * 1 2 3 29 29 H 1.08000 * 125.56607 * 359.95060 * 3 2 1 30 30 H 1.08993 * 109.47106 * 59.99007 * 5 4 3 31 31 H 0.96696 * 114.00115 * 180.02562 * 6 5 4 32 32 H 1.48492 * 110.00395 * 59.99786 * 7 5 4 33 33 H 1.48506 * 109.99775 * 181.31789 * 7 5 4 34 34 H 1.07995 * 126.45802 * 180.26547 * 8 4 3 35 35 H 0.96998 * 120.00097 * 353.80456 * 12 10 9 36 36 H 1.09001 * 109.47024 * 31.40356 * 13 12 10 37 37 H 1.08995 * 109.47219 * 151.41103 * 13 12 10 38 38 H 1.07998 * 120.00255 * 359.97438 * 16 15 14 39 39 H 1.08001 * 119.99972 * 180.28139 * 17 16 15 40 40 H 1.08009 * 119.99786 * 179.83604 * 18 17 16 41 41 H 1.07995 * 119.99952 * 179.97438 * 19 18 17 42 42 H 1.07996 * 119.99836 * 179.97438 * 20 19 18 43 43 H 1.08996 * 113.61767 * 25.42804 * 21 14 13 44 44 H 1.08999 * 113.61512 * 156.25539 * 21 14 13 45 45 H 0.96701 * 113.99823 * 180.02562 * 24 22 21 46 46 H 1.08992 * 113.61362 * 203.66840 * 25 14 13 47 47 H 1.09003 * 113.61224 * 334.57210 * 25 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1008 0.0000 4 6 3.5521 0.7092 0.0006 5 6 4.7537 1.6187 0.0013 6 8 4.7275 2.4434 -1.1654 7 14 6.3089 0.5930 0.0027 8 6 3.5779 -0.6890 0.0070 9 6 2.2677 -1.1182 0.0005 10 6 1.8122 -2.5125 0.0006 11 8 2.6193 -3.4162 -0.1130 12 7 0.5000 -2.7927 0.1267 13 6 0.0302 -4.1743 -0.0032 14 6 -0.2777 -4.4723 -1.4720 15 6 -1.2480 -3.4910 -2.0773 16 6 -2.5287 -3.8969 -2.4031 17 6 -3.4201 -2.9957 -2.9544 18 6 -3.0282 -1.6908 -3.1881 19 6 -1.7459 -1.2862 -2.8671 20 6 -0.8558 -2.1864 -2.3119 21 6 -0.6411 -5.9425 -1.7392 22 6 0.8616 -6.1941 -1.9479 23 1 1.0802 -6.8754 -2.7701 24 8 1.5576 -6.5328 -0.7466 25 6 0.9774 -4.7061 -2.3294 26 1 -0.3635 -0.1829 1.0112 27 1 -0.3634 0.9673 -0.3473 28 1 -0.3634 -0.7843 -0.6641 29 1 1.9082 2.1235 -0.0008 30 1 4.7328 2.2477 0.8913 31 1 5.4733 3.0554 -1.2314 32 1 6.3497 -0.2693 -1.2055 33 1 7.5010 1.4781 0.0355 34 1 4.4582 -1.3146 0.0131 35 1 -0.1329 -2.0802 0.3073 36 1 0.8034 -4.8558 0.3514 37 1 -0.8731 -4.3084 0.5917 38 1 -2.8336 -4.9174 -2.2243 39 1 -4.4221 -3.3116 -3.2048 40 1 -3.7240 -0.9873 -3.6212 41 1 -1.4396 -0.2669 -3.0500 42 1 0.1461 -1.8704 -2.0615 43 1 -1.0530 -6.4553 -0.8702 44 1 -1.2385 -6.0879 -2.6392 45 1 2.5032 -6.6919 -0.8714 46 1 0.8228 -4.5142 -3.3911 47 1 1.8712 -4.2214 -1.9364 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:22:07 Heat of formation + Delta-G solvation = 11.849568 kcal Electronic energy + Delta-G solvation = -31463.846491 eV Core-core repulsion = 27387.843753 eV Total energy + Delta-G solvation = -4076.002738 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.64855 -41.74417 -39.76886 -39.23499 -37.76010 -36.30337 -35.35768 -33.92587 -31.96221 -31.74869 -30.89679 -29.09211 -28.04495 -26.85901 -25.77132 -24.72812 -23.34476 -23.21080 -22.29522 -21.25347 -20.60424 -19.74791 -18.64198 -18.47891 -18.37151 -17.70695 -16.97187 -16.88065 -16.79931 -16.34127 -16.14058 -15.86256 -15.61105 -15.44985 -15.24211 -14.99567 -14.94681 -14.48923 -14.21279 -14.07463 -13.91540 -13.87513 -13.75299 -13.41352 -13.24074 -13.14560 -13.04949 -12.84468 -12.63095 -12.41245 -12.20291 -12.00630 -11.76647 -11.75827 -11.11220 -10.98922 -10.51747 -10.37179 -10.09731 -9.89881 -9.68224 -9.59493 -9.14298 -4.78923 0.35064 0.38078 0.50801 1.40277 1.62655 1.66969 1.80064 2.14046 2.16389 2.43016 2.76630 3.15792 3.40362 3.48913 3.53164 3.58134 3.69458 3.80510 3.85765 3.89540 3.99654 4.02434 4.07894 4.13003 4.15736 4.16749 4.22908 4.40084 4.45338 4.51092 4.57197 4.57885 4.62935 4.73167 4.85144 4.92123 4.97075 5.03042 5.11746 5.15210 5.18675 5.23705 5.30484 5.40927 5.52105 5.54406 5.64416 5.73243 5.93029 6.00160 6.11574 6.49198 6.57382 6.81856 7.24833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 N -0.428 5.428 3 C 0.055 3.945 4 C -0.168 4.168 5 C -0.038 4.038 6 O -0.540 6.540 7 Si 0.685 3.315 8 C -0.097 4.097 9 C -0.058 4.058 10 C 0.591 3.409 11 O -0.516 6.516 12 N -0.734 5.734 13 C 0.134 3.866 14 C -0.056 4.056 15 C -0.060 4.060 16 C -0.117 4.117 17 C -0.115 4.115 18 C -0.123 4.123 19 C -0.121 4.121 20 C -0.123 4.123 21 C -0.121 4.121 22 C 0.084 3.916 23 H 0.067 0.933 24 O -0.545 6.545 25 C -0.165 4.165 26 H 0.083 0.917 27 H 0.099 0.901 28 H 0.097 0.903 29 H 0.171 0.829 30 H 0.071 0.929 31 H 0.377 0.623 32 H -0.255 1.255 33 H -0.264 1.264 34 H 0.154 0.846 35 H 0.395 0.605 36 H 0.117 0.883 37 H 0.078 0.922 38 H 0.125 0.875 39 H 0.123 0.877 40 H 0.121 0.879 41 H 0.120 0.880 42 H 0.118 0.882 43 H 0.081 0.919 44 H 0.099 0.901 45 H 0.384 0.616 46 H 0.083 0.917 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.755 1.922 1.663 4.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.101 4.101 2 N -0.104 5.104 3 C -0.081 4.081 4 C -0.174 4.174 5 C -0.149 4.149 6 O -0.347 6.347 7 Si 0.586 3.414 8 C -0.123 4.123 9 C -0.169 4.169 10 C 0.379 3.621 11 O -0.392 6.392 12 N -0.389 5.389 13 C 0.010 3.990 14 C -0.057 4.057 15 C -0.060 4.060 16 C -0.135 4.135 17 C -0.133 4.133 18 C -0.141 4.141 19 C -0.139 4.139 20 C -0.141 4.141 21 C -0.159 4.159 22 C 0.024 3.976 23 H 0.085 0.915 24 O -0.351 6.351 25 C -0.203 4.203 26 H 0.102 0.898 27 H 0.118 0.882 28 H 0.115 0.885 29 H 0.188 0.812 30 H 0.089 0.911 31 H 0.224 0.776 32 H -0.179 1.179 33 H -0.190 1.190 34 H 0.171 0.829 35 H 0.233 0.767 36 H 0.135 0.865 37 H 0.097 0.903 38 H 0.143 0.857 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.138 0.862 42 H 0.136 0.864 43 H 0.100 0.900 44 H 0.117 0.883 45 H 0.233 0.767 46 H 0.101 0.899 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.981 0.722 1.304 4.250 hybrid contribution 0.050 1.645 -0.954 1.902 sum -3.931 2.367 0.350 4.602 Atomic orbital electron populations 1.22662 0.77078 1.06173 1.04237 1.43980 1.06125 1.05727 1.54554 1.21824 0.89881 0.91458 1.04891 1.18652 0.92895 0.92943 1.12933 1.24007 1.04798 0.96649 0.89425 1.86587 1.50101 1.54099 1.43941 0.94905 0.74577 0.82772 0.89120 1.21109 0.95029 0.93672 1.02525 1.20371 0.90719 0.86344 1.19433 1.17008 0.82366 0.86483 0.76264 1.90825 1.53345 1.45724 1.49261 1.46279 1.07996 1.10789 1.73799 1.21386 1.01379 0.83161 0.93062 1.21169 0.95160 0.93438 0.95977 1.19671 0.94168 0.94005 0.98197 1.21120 0.93078 0.99924 0.99337 1.21207 0.99657 0.93602 0.98796 1.21182 0.96346 0.96353 1.00242 1.21182 0.93991 0.99620 0.99116 1.21054 0.99497 0.93333 1.00221 1.23143 0.95313 0.94283 1.03138 1.22600 0.93276 0.94367 0.87356 0.91514 1.86382 1.25776 1.91455 1.31458 1.23896 0.98736 0.98007 0.99661 0.89836 0.88247 0.88475 0.81195 0.91149 0.77563 1.17902 1.18958 0.82876 0.76686 0.86469 0.90340 0.85742 0.85928 0.86050 0.86239 0.86412 0.90005 0.88295 0.76723 0.89888 0.88695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.12 9.39 59.84 0.56 0.44 16 2 N -0.43 -0.06 3.16 -120.23 -0.38 -0.44 16 3 C 0.06 0.04 11.26 -16.91 -0.19 -0.15 16 4 C -0.17 -0.33 5.44 -105.01 -0.57 -0.90 16 5 C -0.04 -0.03 2.99 36.01 0.11 0.08 16 6 O -0.54 -0.89 12.85 -35.23 -0.45 -1.34 16 7 Si 0.69 0.39 30.64 -169.99 -5.21 -4.82 16 8 C -0.10 -0.28 9.14 -39.11 -0.36 -0.64 16 9 C -0.06 -0.14 6.88 -81.98 -0.56 -0.71 16 10 C 0.59 1.72 6.78 -12.85 -0.09 1.63 16 11 O -0.52 -2.86 14.37 5.20 0.07 -2.78 16 12 N -0.73 -0.27 3.21 -61.62 -0.20 -0.47 16 13 C 0.13 0.08 5.43 -4.04 -0.02 0.06 16 14 C -0.06 -0.01 0.89 -154.85 -0.14 -0.15 16 15 C -0.06 -0.01 4.82 -104.62 -0.50 -0.52 16 16 C -0.12 0.02 9.03 -39.58 -0.36 -0.33 16 17 C -0.11 0.04 10.05 -39.58 -0.40 -0.36 16 18 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 19 C -0.12 0.05 9.79 -39.58 -0.39 -0.34 16 20 C -0.12 -0.03 6.55 -39.59 -0.26 -0.29 16 21 C -0.12 0.04 6.10 -25.92 -0.16 -0.12 16 22 C 0.08 0.04 5.28 -25.78 -0.14 -0.09 16 23 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 24 O -0.54 -0.75 11.51 -35.23 -0.41 -1.16 16 25 C -0.17 -0.23 6.82 -25.77 -0.18 -0.41 16 26 H 0.08 -0.37 7.91 -51.93 -0.41 -0.78 16 27 H 0.10 -0.48 8.10 -51.92 -0.42 -0.90 16 28 H 0.10 -0.27 2.71 -51.93 -0.14 -0.41 16 29 H 0.17 -0.26 8.06 -52.49 -0.42 -0.68 16 30 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 31 H 0.38 -0.85 8.74 45.56 0.40 -0.45 16 32 H -0.25 -1.09 7.11 56.52 0.40 -0.69 16 33 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 34 H 0.15 0.37 6.38 -52.49 -0.33 0.04 16 35 H 0.40 -0.56 4.65 -40.82 -0.19 -0.75 16 36 H 0.12 0.31 5.19 -51.93 -0.27 0.04 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.12 -0.18 6.61 -52.49 -0.35 -0.53 16 39 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 40 H 0.12 -0.23 8.06 -52.48 -0.42 -0.65 16 41 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 42 H 0.12 0.11 5.81 -52.49 -0.31 -0.20 16 43 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 44 H 0.10 -0.12 7.02 -51.93 -0.36 -0.49 16 45 H 0.38 -0.43 9.12 45.56 0.42 -0.01 16 46 H 0.08 0.13 8.09 -51.93 -0.42 -0.29 16 47 H 0.09 0.34 5.27 -51.93 -0.27 0.07 16 LS Contribution 366.83 15.07 5.53 5.53 Total: 0.00 -8.30 366.83 -10.31 -18.61 By element: Atomic # 1 Polarization: -4.76 SS G_CDS: -5.23 Total: -9.99 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -4.03 Total: -3.14 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.58 Total: -0.91 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -0.78 Total: -5.28 kcal Atomic # 14 Polarization: 0.39 SS G_CDS: -5.21 Total: -4.82 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -8.30 -10.31 -18.61 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.461 kcal (2) G-P(sol) polarization free energy of solvation -8.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.611 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.850 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds