Wall clock time and date at job start Sat Mar 6 2021 23:22:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35524 * 125.68051 * 2 1 4 4 C 1.35454 * 108.87498 * 179.97438 * 3 2 1 5 5 C 1.50701 * 126.07119 * 180.02562 * 4 3 2 6 6 O 1.42901 * 109.46723 * 299.99477 * 5 4 3 7 7 Si 1.86298 * 109.47046 * 179.97438 * 5 4 3 8 8 C 1.39844 * 107.86259 * 359.73780 * 4 3 2 9 9 C 1.37653 * 125.67383 * 179.97438 * 2 1 3 10 10 C 1.46680 * 126.23552 * 0.02605 * 9 2 1 11 11 O 1.21693 * 119.99863 * 173.78900 * 10 9 2 12 12 N 1.34776 * 119.99746 * 353.77569 * 10 9 2 13 13 C 1.46504 * 119.99738 * 174.06728 * 12 10 9 14 14 C 1.53002 * 109.47363 * 271.40902 * 13 12 10 15 15 C 1.50698 * 112.84669 * 305.25290 * 14 13 12 16 16 C 1.38242 * 119.99460 * 249.78371 * 15 14 13 17 17 C 1.38235 * 119.99668 * 179.79368 * 16 15 14 18 18 C 1.38237 * 120.00059 * 0.43171 * 17 16 15 19 19 C 1.38237 * 120.00053 * 359.82285 * 18 17 16 20 20 C 1.38232 * 119.99839 * 359.97219 * 19 18 17 21 21 C 1.53775 * 113.61588 * 174.05330 * 14 13 12 22 22 C 1.53785 * 87.08179 * 270.88116 * 21 14 13 23 23 H 1.08997 * 113.61505 * 219.92996 * 22 21 14 24 24 O 1.42909 * 113.61157 * 89.11414 * 22 21 14 25 25 C 1.53788 * 113.61539 * 76.44337 * 14 13 12 26 26 H 1.08998 * 109.47834 * 259.74993 * 1 2 3 27 27 H 1.09009 * 109.47288 * 19.74898 * 1 2 3 28 28 H 1.09005 * 109.47412 * 139.74318 * 1 2 3 29 29 H 1.08000 * 125.56607 * 359.95060 * 3 2 1 30 30 H 1.08993 * 109.47106 * 59.99007 * 5 4 3 31 31 H 0.96696 * 114.00115 * 180.02562 * 6 5 4 32 32 H 1.48492 * 110.00395 * 59.99786 * 7 5 4 33 33 H 1.48506 * 109.99775 * 181.31789 * 7 5 4 34 34 H 1.07995 * 126.45802 * 180.26547 * 8 4 3 35 35 H 0.96998 * 120.00097 * 353.80456 * 12 10 9 36 36 H 1.09001 * 109.47024 * 31.40356 * 13 12 10 37 37 H 1.08995 * 109.47219 * 151.41103 * 13 12 10 38 38 H 1.07998 * 120.00255 * 359.97438 * 16 15 14 39 39 H 1.08001 * 119.99972 * 180.28139 * 17 16 15 40 40 H 1.08009 * 119.99786 * 179.83604 * 18 17 16 41 41 H 1.07995 * 119.99952 * 179.97438 * 19 18 17 42 42 H 1.07996 * 119.99836 * 179.97438 * 20 19 18 43 43 H 1.08996 * 113.61767 * 25.42804 * 21 14 13 44 44 H 1.08999 * 113.61512 * 156.25539 * 21 14 13 45 45 H 0.96701 * 113.99823 * 180.02562 * 24 22 21 46 46 H 1.08992 * 113.61362 * 203.66840 * 25 14 13 47 47 H 1.09003 * 113.61224 * 334.57210 * 25 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1008 0.0000 4 6 3.5521 0.7092 0.0006 5 6 4.7537 1.6187 0.0013 6 8 4.7275 2.4434 -1.1654 7 14 6.3089 0.5930 0.0027 8 6 3.5779 -0.6890 0.0070 9 6 2.2677 -1.1182 0.0005 10 6 1.8122 -2.5125 0.0006 11 8 2.6193 -3.4162 -0.1130 12 7 0.5000 -2.7927 0.1267 13 6 0.0302 -4.1743 -0.0032 14 6 -0.2777 -4.4723 -1.4720 15 6 -1.2480 -3.4910 -2.0773 16 6 -2.5287 -3.8969 -2.4031 17 6 -3.4201 -2.9957 -2.9544 18 6 -3.0282 -1.6908 -3.1881 19 6 -1.7459 -1.2862 -2.8671 20 6 -0.8558 -2.1864 -2.3119 21 6 -0.6411 -5.9425 -1.7392 22 6 0.8616 -6.1941 -1.9479 23 1 1.0802 -6.8754 -2.7701 24 8 1.5576 -6.5328 -0.7466 25 6 0.9774 -4.7061 -2.3294 26 1 -0.3635 -0.1829 1.0112 27 1 -0.3634 0.9673 -0.3473 28 1 -0.3634 -0.7843 -0.6641 29 1 1.9082 2.1235 -0.0008 30 1 4.7328 2.2477 0.8913 31 1 5.4733 3.0554 -1.2314 32 1 6.3497 -0.2693 -1.2055 33 1 7.5010 1.4781 0.0355 34 1 4.4582 -1.3146 0.0131 35 1 -0.1329 -2.0802 0.3073 36 1 0.8034 -4.8558 0.3514 37 1 -0.8731 -4.3084 0.5917 38 1 -2.8336 -4.9174 -2.2243 39 1 -4.4221 -3.3116 -3.2048 40 1 -3.7240 -0.9873 -3.6212 41 1 -1.4396 -0.2669 -3.0500 42 1 0.1461 -1.8704 -2.0615 43 1 -1.0530 -6.4553 -0.8702 44 1 -1.2385 -6.0879 -2.6392 45 1 2.5032 -6.6919 -0.8714 46 1 0.8228 -4.5142 -3.3911 47 1 1.8712 -4.2214 -1.9364 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_10803934.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:22:05 Heat of formation + Delta-G solvation = 13.081636 kcal Electronic energy + Delta-G solvation = -31463.793065 eV Core-core repulsion = 27387.843753 eV Total energy + Delta-G solvation = -4075.949312 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.70685 -41.77309 -39.89059 -39.24930 -37.82158 -36.40292 -35.43472 -33.94537 -31.90298 -31.72015 -30.98368 -29.07760 -28.04549 -26.90308 -25.80532 -24.73476 -23.32684 -23.23361 -22.30438 -21.35379 -20.67983 -19.78158 -18.67444 -18.49764 -18.42692 -17.71534 -17.05057 -16.95138 -16.84670 -16.36335 -16.12148 -15.89838 -15.64483 -15.47408 -15.22469 -15.04198 -15.00738 -14.47551 -14.22293 -14.15580 -14.04264 -13.92057 -13.72374 -13.37041 -13.22204 -13.15483 -13.04642 -12.82335 -12.71657 -12.51896 -12.21315 -12.00209 -11.95631 -11.75932 -11.25098 -11.12659 -10.57166 -10.42964 -10.20213 -9.86106 -9.71102 -9.58501 -9.22263 -4.87993 0.36475 0.41352 0.44267 1.32648 1.57026 1.58895 1.74983 2.01164 2.08201 2.26462 2.81152 3.15486 3.37546 3.51067 3.57409 3.67432 3.71187 3.77461 3.85232 4.03008 4.08799 4.11749 4.13245 4.16761 4.19966 4.25917 4.35022 4.41414 4.48537 4.52722 4.58597 4.62814 4.68231 4.69850 4.84164 4.87581 4.92700 5.04908 5.09132 5.10186 5.12969 5.17749 5.23402 5.34583 5.56574 5.61162 5.63012 5.68379 5.83807 6.07157 6.14466 6.41919 6.69223 6.82794 7.10306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.420 5.420 3 C 0.062 3.938 4 C -0.188 4.188 5 C -0.035 4.035 6 O -0.558 6.558 7 Si 0.743 3.257 8 C -0.120 4.120 9 C -0.075 4.075 10 C 0.589 3.411 11 O -0.552 6.552 12 N -0.719 5.719 13 C 0.132 3.868 14 C -0.048 4.048 15 C -0.067 4.067 16 C -0.122 4.122 17 C -0.121 4.121 18 C -0.129 4.129 19 C -0.124 4.124 20 C -0.128 4.128 21 C -0.114 4.114 22 C 0.081 3.919 23 H 0.076 0.924 24 O -0.558 6.558 25 C -0.168 4.168 26 H 0.101 0.899 27 H 0.124 0.876 28 H 0.093 0.907 29 H 0.198 0.802 30 H 0.098 0.902 31 H 0.393 0.607 32 H -0.314 1.314 33 H -0.281 1.281 34 H 0.143 0.857 35 H 0.405 0.595 36 H 0.096 0.904 37 H 0.096 0.904 38 H 0.136 0.864 39 H 0.137 0.863 40 H 0.136 0.864 41 H 0.132 0.868 42 H 0.107 0.893 43 H 0.084 0.916 44 H 0.111 0.889 45 H 0.391 0.609 46 H 0.079 0.921 47 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.960 3.213 1.968 7.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 N -0.094 5.094 3 C -0.075 4.075 4 C -0.194 4.194 5 C -0.146 4.146 6 O -0.368 6.368 7 Si 0.650 3.350 8 C -0.146 4.146 9 C -0.186 4.186 10 C 0.377 3.623 11 O -0.430 6.430 12 N -0.374 5.374 13 C 0.009 3.991 14 C -0.050 4.050 15 C -0.068 4.068 16 C -0.140 4.140 17 C -0.139 4.139 18 C -0.147 4.147 19 C -0.142 4.142 20 C -0.146 4.146 21 C -0.152 4.152 22 C 0.022 3.978 23 H 0.094 0.906 24 O -0.365 6.365 25 C -0.206 4.206 26 H 0.119 0.881 27 H 0.142 0.858 28 H 0.111 0.889 29 H 0.215 0.785 30 H 0.116 0.884 31 H 0.243 0.757 32 H -0.243 1.243 33 H -0.208 1.208 34 H 0.161 0.839 35 H 0.245 0.755 36 H 0.114 0.886 37 H 0.114 0.886 38 H 0.154 0.846 39 H 0.155 0.845 40 H 0.154 0.846 41 H 0.150 0.850 42 H 0.125 0.875 43 H 0.103 0.897 44 H 0.129 0.871 45 H 0.241 0.759 46 H 0.097 0.903 47 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -6.216 2.037 1.636 6.743 hybrid contribution 0.752 1.239 -1.126 1.835 sum -5.465 3.276 0.510 6.392 Atomic orbital electron populations 1.22945 0.75039 1.07517 1.05399 1.44135 1.07270 1.04809 1.53207 1.22238 0.89454 0.92474 1.03285 1.18853 0.94177 0.92542 1.13808 1.23982 1.03657 0.96708 0.90204 1.86540 1.51208 1.54560 1.44495 0.94218 0.73986 0.80013 0.86764 1.21217 0.95247 0.94566 1.03607 1.20310 0.91134 0.86765 1.20440 1.17145 0.82798 0.86457 0.75860 1.90799 1.54391 1.46744 1.51105 1.46155 1.07341 1.11123 1.72758 1.21393 1.01277 0.82755 0.93716 1.21059 0.94493 0.94096 0.95309 1.19673 0.94426 0.93938 0.98719 1.21286 0.92821 1.00653 0.99209 1.21457 1.00338 0.93654 0.98472 1.21426 0.96536 0.96742 1.00005 1.21340 0.93977 1.00115 0.98776 1.21007 0.99170 0.93650 1.00820 1.23152 0.94678 0.93573 1.03788 1.22696 0.93975 0.93806 0.87365 0.90634 1.86360 1.26557 1.91443 1.32152 1.23840 0.98480 0.98802 0.99481 0.88082 0.85783 0.88902 0.78525 0.88434 0.75743 1.24270 1.20781 0.83945 0.75463 0.88570 0.88606 0.84596 0.84488 0.84626 0.85020 0.87535 0.89704 0.87060 0.75891 0.90282 0.91153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.23 9.39 127.77 1.20 0.97 16 2 N -0.42 0.03 3.16 -534.31 -1.69 -1.66 16 3 C 0.06 0.02 11.26 83.48 0.94 0.96 16 4 C -0.19 -0.81 5.44 -20.12 -0.11 -0.92 16 5 C -0.03 -0.04 2.99 71.24 0.21 0.17 16 6 O -0.56 -1.64 12.85 -148.98 -1.91 -3.56 16 7 Si 0.74 2.08 30.64 68.60 2.10 4.18 16 8 C -0.12 -0.94 9.14 22.57 0.21 -0.73 16 9 C -0.07 -0.47 6.88 40.35 0.28 -0.19 16 10 C 0.59 4.62 6.78 86.45 0.59 5.21 16 11 O -0.55 -7.89 14.37 -4.33 -0.06 -7.95 16 12 N -0.72 -1.23 3.21 -467.07 -1.50 -2.73 16 13 C 0.13 0.28 5.43 86.38 0.47 0.75 16 14 C -0.05 -0.06 0.89 -52.40 -0.05 -0.10 16 15 C -0.07 -0.02 4.82 -19.87 -0.10 -0.12 16 16 C -0.12 0.16 9.03 22.27 0.20 0.36 16 17 C -0.12 0.25 10.05 22.27 0.22 0.47 16 18 C -0.13 0.28 10.05 22.27 0.22 0.50 16 19 C -0.12 0.20 9.79 22.27 0.22 0.42 16 20 C -0.13 -0.07 6.55 22.27 0.15 0.08 16 21 C -0.11 0.07 6.10 31.12 0.19 0.26 16 22 C 0.08 0.17 5.28 31.21 0.16 0.34 16 23 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 24 O -0.56 -2.50 11.51 -148.98 -1.71 -4.21 16 25 C -0.17 -0.78 6.82 31.21 0.21 -0.57 16 26 H 0.10 -1.08 7.91 -2.39 -0.02 -1.10 16 27 H 0.12 -1.51 8.10 -2.38 -0.02 -1.53 16 28 H 0.09 -0.57 2.71 -2.38 -0.01 -0.58 16 29 H 0.20 -1.09 8.06 -2.91 -0.02 -1.12 16 30 H 0.10 -0.38 7.96 -2.39 -0.02 -0.40 16 31 H 0.39 -1.94 8.74 -74.06 -0.65 -2.59 16 32 H -0.31 -3.97 7.11 99.48 0.71 -3.27 16 33 H -0.28 -1.51 7.11 99.48 0.71 -0.80 16 34 H 0.14 1.22 6.38 -2.91 -0.02 1.20 16 35 H 0.41 -1.12 4.65 -92.71 -0.43 -1.56 16 36 H 0.10 0.69 5.19 -2.39 -0.01 0.68 16 37 H 0.10 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.14 -0.56 6.61 -2.91 -0.02 -0.58 16 39 H 0.14 -0.74 8.06 -2.91 -0.02 -0.76 16 40 H 0.14 -0.74 8.06 -2.91 -0.02 -0.76 16 41 H 0.13 -0.61 8.06 -2.91 -0.02 -0.63 16 42 H 0.11 0.29 5.81 -2.91 -0.02 0.27 16 43 H 0.08 -0.08 8.10 -2.39 -0.02 -0.10 16 44 H 0.11 -0.36 7.02 -2.39 -0.02 -0.37 16 45 H 0.39 0.02 9.12 -74.06 -0.68 -0.66 16 46 H 0.08 0.38 8.09 -2.39 -0.02 0.37 16 47 H 0.07 0.72 5.27 -2.39 -0.01 0.71 16 Total: 0.00 -21.61 366.83 -0.23 -21.84 By element: Atomic # 1 Polarization: -13.10 SS G_CDS: -0.67 Total: -13.77 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: 5.22 Total: 7.85 kcal Atomic # 7 Polarization: -1.19 SS G_CDS: -3.19 Total: -4.38 kcal Atomic # 8 Polarization: -12.03 SS G_CDS: -3.69 Total: -15.73 kcal Atomic # 14 Polarization: 2.08 SS G_CDS: 2.10 Total: 4.18 kcal Total: -21.61 -0.23 -21.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_10803934.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.919 kcal (2) G-P(sol) polarization free energy of solvation -21.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds