Wall clock time and date at job start Sat Mar 6 2021 23:22:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86308 * 109.47162 * 2 1 4 4 C 1.50703 * 109.46923 * 240.00238 * 2 1 3 5 5 C 1.36447 * 120.29547 * 239.99476 * 4 2 1 6 6 C 1.40085 * 119.25459 * 179.97438 * 5 4 2 7 7 C 1.40860 * 132.86641 * 179.97438 * 6 5 4 8 8 C 1.46568 * 126.57727 * 359.97438 * 7 6 5 9 9 O 1.21717 * 120.00025 * 359.97438 * 8 7 6 10 10 N 1.34778 * 119.99820 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99959 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46666 * 182.14134 * 11 10 8 13 13 C 1.50696 * 112.85136 * 305.77765 * 12 11 10 14 14 C 1.38236 * 119.99608 * 101.76057 * 13 12 11 15 15 C 1.38241 * 119.99641 * 179.79039 * 14 13 12 16 16 C 1.38230 * 120.00196 * 0.45674 * 15 14 13 17 17 C 1.38240 * 119.99684 * 359.77097 * 16 15 14 18 18 C 1.38229 * 120.00338 * 0.02562 * 17 16 15 19 19 C 1.53787 * 113.60871 * 174.58625 * 12 11 10 20 20 C 1.53788 * 87.17080 * 270.75725 * 19 12 11 21 21 H 1.08997 * 113.61451 * 220.05990 * 20 19 12 22 22 O 1.42900 * 113.61184 * 89.15978 * 20 19 12 23 23 C 1.53783 * 113.68990 * 77.05461 * 12 11 10 24 24 C 1.40558 * 106.84003 * 180.24827 * 7 6 5 25 25 N 1.30738 * 108.74120 * 359.61831 * 24 7 6 26 26 N 1.36575 * 120.23387 * 0.02562 * 6 5 4 27 27 C 1.36245 * 120.07760 * 359.97438 * 26 6 5 28 28 C 1.35186 * 120.70488 * 0.02562 * 27 26 6 29 29 H 0.96698 * 114.00424 * 59.99705 * 1 2 3 30 30 H 1.09000 * 109.47791 * 119.99967 * 2 1 3 31 31 H 1.48495 * 109.99754 * 60.00433 * 3 2 1 32 32 H 1.48499 * 109.99773 * 181.32184 * 3 2 1 33 33 H 1.07998 * 120.37343 * 359.96079 * 5 4 2 34 34 H 0.97001 * 119.99888 * 0.02562 * 10 8 7 35 35 H 1.08993 * 109.47081 * 62.14346 * 11 10 8 36 36 H 1.09004 * 109.46763 * 302.14213 * 11 10 8 37 37 H 1.08004 * 120.00416 * 359.97438 * 14 13 12 38 38 H 1.08003 * 119.99370 * 180.24765 * 15 14 13 39 39 H 1.07996 * 120.00345 * 179.79684 * 16 15 14 40 40 H 1.08002 * 119.99406 * 179.97438 * 17 16 15 41 41 H 1.07997 * 120.00486 * 179.97438 * 18 17 16 42 42 H 1.09001 * 113.61378 * 25.34398 * 19 12 11 43 43 H 1.08999 * 113.61265 * 156.16861 * 19 12 11 44 44 H 0.96704 * 114.00019 * 179.97438 * 22 20 19 45 45 H 1.09003 * 113.60965 * 203.67476 * 23 12 11 46 46 H 1.09000 * 113.60975 * 334.48572 * 23 12 11 47 47 H 1.07997 * 125.62615 * 179.73857 * 24 7 6 48 48 H 1.08005 * 119.64673 * 180.02562 * 27 26 6 49 49 H 1.08004 * 119.83863 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7161 -1.8202 -1.1124 6 6 3.1705 -2.4638 -2.2707 7 6 3.9749 -3.6006 -2.4825 8 6 4.5769 -4.4491 -1.4502 9 8 4.3991 -4.1947 -0.2732 10 7 5.3283 -5.5106 -1.8041 11 6 5.9297 -6.3591 -0.7722 12 6 6.7694 -7.4521 -1.4364 13 6 5.9928 -8.2513 -2.4510 14 6 6.1539 -7.9980 -3.8003 15 6 5.4448 -8.7341 -4.7312 16 6 4.5677 -9.7169 -4.3123 17 6 4.4031 -9.9669 -2.9627 18 6 5.1153 -9.2338 -2.0321 19 6 7.5524 -8.3200 -0.4371 20 6 8.6949 -7.2981 -0.5616 21 1 9.6854 -7.7519 -0.5903 22 8 8.6035 -6.2207 0.3726 23 6 8.1307 -6.9574 -1.9530 24 6 4.0945 -3.7614 -3.8737 25 7 3.4168 -2.8131 -4.4660 26 7 2.8304 -1.9830 -3.5030 27 6 2.0462 -0.8741 -3.6106 28 6 1.5963 -0.2369 -2.5065 29 1 -0.3934 0.4417 -0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5616 2.4678 1.2085 32 1 3.5346 1.7703 -0.0322 33 1 2.9843 -2.1982 -0.1369 34 1 5.4709 -5.7127 -2.7420 35 1 5.1420 -6.8184 -0.1751 36 1 6.5666 -5.7522 -0.1286 37 1 6.8360 -7.2271 -4.1275 38 1 5.5737 -8.5389 -5.7856 39 1 4.0113 -10.2897 -5.0394 40 1 3.7175 -10.7346 -2.6355 41 1 4.9864 -9.4288 -0.9777 42 1 7.1041 -8.3548 0.5558 43 1 7.8062 -9.3077 -0.8219 44 1 9.3195 -5.5748 0.2995 45 1 8.5438 -7.5721 -2.7527 46 1 8.1488 -5.8925 -2.1852 47 1 4.6524 -4.5408 -4.3712 48 1 1.7811 -0.5001 -4.5886 49 1 0.9758 0.6412 -2.6081 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_11618758.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:22:14 Heat of formation + Delta-G solvation = 49.555798 kcal Electronic energy + Delta-G solvation = -34750.000247 eV Core-core repulsion = 30225.528241 eV Total energy + Delta-G solvation = -4524.472006 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -43.26060 -41.84331 -39.94759 -39.35724 -39.21126 -37.23896 -36.34517 -34.81800 -34.16442 -32.07077 -31.91095 -31.77490 -30.59173 -28.47959 -27.14074 -26.93434 -25.12982 -24.57033 -23.48728 -23.20474 -22.96215 -22.37120 -21.08267 -20.02351 -18.95142 -18.61311 -18.51862 -17.88620 -17.77877 -17.47530 -16.92926 -16.72839 -16.52531 -16.34170 -15.88773 -15.83402 -15.68669 -15.55330 -15.41311 -15.25583 -14.73334 -14.54940 -14.42657 -14.30669 -14.17208 -13.99799 -13.86600 -13.68692 -13.50649 -13.16827 -13.12154 -13.04223 -12.73066 -12.39140 -12.25689 -12.14948 -11.95664 -11.88988 -11.73241 -11.48667 -11.20334 -10.81348 -10.78624 -10.63820 -10.30352 -9.87549 -9.82004 -9.64074 -8.72410 -5.17136 -0.52880 -0.12220 0.40244 0.45989 1.03448 1.11045 1.15776 1.58969 1.89023 2.09722 2.34262 2.69032 2.81445 3.01358 3.09063 3.19579 3.35473 3.37240 3.46070 3.49373 3.61435 3.67540 3.75073 3.87898 3.93808 4.03528 4.06442 4.09378 4.17285 4.21084 4.26399 4.33344 4.43794 4.52556 4.56817 4.60094 4.65224 4.70821 4.75345 4.80324 4.90684 4.99749 5.03588 5.09436 5.10260 5.14470 5.18227 5.22562 5.31187 5.54630 5.59857 5.62384 5.66735 5.67712 6.05727 6.34311 6.39660 6.63535 6.72831 7.50707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.068 4.068 3 Si 0.699 3.301 4 C -0.069 4.069 5 C -0.095 4.095 6 C 0.169 3.831 7 C -0.313 4.313 8 C 0.599 3.401 9 O -0.550 6.550 10 N -0.724 5.724 11 C 0.148 3.852 12 C -0.051 4.051 13 C -0.068 4.068 14 C -0.124 4.124 15 C -0.116 4.116 16 C -0.122 4.122 17 C -0.115 4.115 18 C -0.110 4.110 19 C -0.115 4.115 20 C 0.079 3.921 21 H 0.072 0.928 22 O -0.546 6.546 23 C -0.162 4.162 24 C 0.120 3.880 25 N -0.312 5.312 26 N -0.267 5.267 27 C 0.121 3.879 28 C -0.157 4.157 29 H 0.378 0.622 30 H 0.123 0.877 31 H -0.247 1.247 32 H -0.254 1.254 33 H 0.161 0.839 34 H 0.396 0.604 35 H 0.066 0.934 36 H 0.097 0.903 37 H 0.122 0.878 38 H 0.123 0.877 39 H 0.121 0.879 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.083 0.917 43 H 0.101 0.899 44 H 0.382 0.618 45 H 0.094 0.906 46 H 0.078 0.922 47 H 0.196 0.804 48 H 0.179 0.821 49 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.075 1.683 -4.906 5.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.075 4.075 5 C -0.114 4.114 6 C 0.048 3.952 7 C -0.328 4.328 8 C 0.388 3.612 9 O -0.429 6.429 10 N -0.375 5.375 11 C 0.024 3.976 12 C -0.051 4.051 13 C -0.068 4.068 14 C -0.142 4.142 15 C -0.134 4.134 16 C -0.140 4.140 17 C -0.133 4.133 18 C -0.128 4.128 19 C -0.153 4.153 20 C 0.020 3.980 21 H 0.090 0.910 22 O -0.352 6.352 23 C -0.200 4.200 24 C -0.061 4.061 25 N -0.133 5.133 26 N -0.031 5.031 27 C -0.005 4.005 28 C -0.178 4.178 29 H 0.226 0.774 30 H 0.140 0.860 31 H -0.171 1.171 32 H -0.179 1.179 33 H 0.179 0.821 34 H 0.230 0.770 35 H 0.085 0.915 36 H 0.115 0.885 37 H 0.139 0.861 38 H 0.141 0.859 39 H 0.139 0.861 40 H 0.140 0.860 41 H 0.139 0.861 42 H 0.102 0.898 43 H 0.120 0.880 44 H 0.231 0.769 45 H 0.113 0.887 46 H 0.097 0.903 47 H 0.212 0.788 48 H 0.196 0.804 49 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.702 2.214 -4.120 4.730 hybrid contribution 0.868 -1.034 -0.023 1.351 sum 1.570 1.180 -4.143 4.585 Atomic orbital electron populations 1.86607 1.16338 1.81658 1.49069 1.25168 0.85568 1.10325 0.96740 0.95032 0.81475 0.75989 0.87713 1.20495 0.96075 0.95043 0.95913 1.20711 0.98171 0.94432 0.98134 1.19252 0.95702 0.94088 0.86189 1.19660 1.15893 1.03661 0.93590 1.16794 0.77602 0.79519 0.87276 1.90786 1.61593 1.71975 1.18523 1.45622 1.52771 1.28962 1.10154 1.21186 0.96094 0.90599 0.89678 1.20938 0.93422 0.95417 0.95354 1.19603 0.97184 0.96416 0.93582 1.21028 1.00365 1.00401 0.92381 1.21169 0.96562 0.96063 0.99584 1.21205 0.98666 0.98192 0.95985 1.21196 0.99280 0.99531 0.93260 1.20996 0.96189 0.95836 0.99784 1.23099 0.95089 0.97176 0.99919 1.22675 0.98032 0.88822 0.88474 0.90995 1.86479 1.53236 1.37633 1.57880 1.23819 0.95448 1.02454 0.98258 1.24021 0.94390 0.95704 0.92025 1.77621 1.18432 1.06533 1.10684 1.46088 1.32215 1.19035 1.05766 1.21589 0.91886 0.85113 1.01897 1.20708 1.04220 1.02669 0.90235 0.77434 0.85993 1.17085 1.17872 0.82143 0.77001 0.91538 0.88483 0.86055 0.85939 0.86077 0.85999 0.86083 0.89789 0.88036 0.76949 0.88707 0.90321 0.78772 0.80386 0.81606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.39 12.87 -35.23 -0.45 -0.06 16 2 C -0.07 0.06 2.84 36.01 0.10 0.16 16 3 Si 0.70 -1.38 31.96 -169.99 -5.43 -6.81 16 4 C -0.07 0.02 4.53 -104.55 -0.47 -0.46 16 5 C -0.09 -0.26 9.35 -39.53 -0.37 -0.63 16 6 C 0.17 0.63 6.76 -84.07 -0.57 0.07 16 7 C -0.31 -1.19 6.17 -104.67 -0.65 -1.83 16 8 C 0.60 2.85 7.78 -12.90 -0.10 2.75 16 9 O -0.55 -4.41 15.71 5.17 0.08 -4.33 16 10 N -0.72 -1.33 5.34 -61.65 -0.33 -1.66 16 11 C 0.15 0.28 4.94 -4.04 -0.02 0.26 16 12 C -0.05 0.03 0.73 -154.84 -0.11 -0.08 16 13 C -0.07 0.01 4.24 -104.63 -0.44 -0.44 16 14 C -0.12 0.10 8.08 -39.58 -0.32 -0.22 16 15 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 16 C -0.12 -0.02 10.05 -39.58 -0.40 -0.41 16 17 C -0.11 -0.05 10.05 -39.58 -0.40 -0.45 16 18 C -0.11 -0.06 9.38 -39.59 -0.37 -0.43 16 19 C -0.12 0.09 6.67 -25.91 -0.17 -0.08 16 20 C 0.08 -0.10 5.29 -25.82 -0.14 -0.24 16 21 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 22 O -0.55 -0.01 11.53 -35.23 -0.41 -0.41 16 23 C -0.16 0.28 6.05 -25.83 -0.16 0.13 16 24 C 0.12 0.22 11.44 -17.14 -0.20 0.02 16 25 N -0.31 -0.98 12.57 30.75 0.39 -0.59 16 26 N -0.27 -0.65 3.86 -10.54 -0.04 -0.69 16 27 C 0.12 -0.15 11.17 -16.68 -0.19 -0.34 16 28 C -0.16 0.46 8.38 -39.95 -0.33 0.12 16 29 H 0.38 -2.08 8.08 45.56 0.37 -1.72 16 30 H 0.12 0.00 7.71 -51.93 -0.40 -0.40 16 31 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 33 H 0.16 0.58 7.01 -52.49 -0.37 0.22 16 34 H 0.40 -0.08 6.02 -40.82 -0.25 -0.32 16 35 H 0.07 0.22 8.14 -51.93 -0.42 -0.21 16 36 H 0.10 0.33 5.97 -51.93 -0.31 0.02 16 37 H 0.12 -0.30 7.09 -52.48 -0.37 -0.67 16 38 H 0.12 -0.25 8.06 -52.48 -0.42 -0.68 16 39 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 40 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 41 H 0.12 -0.01 8.01 -52.49 -0.42 -0.43 16 42 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 43 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 44 H 0.38 -1.35 9.12 45.56 0.42 -0.93 16 45 H 0.09 -0.23 7.51 -51.93 -0.39 -0.62 16 46 H 0.08 -0.11 8.10 -51.93 -0.42 -0.54 16 47 H 0.20 -0.38 7.46 -52.49 -0.39 -0.77 16 48 H 0.18 -0.78 8.06 -52.48 -0.42 -1.21 16 49 H 0.17 -1.26 7.31 -52.48 -0.38 -1.64 16 LS Contribution 406.08 15.07 6.12 6.12 Total: 0.00 -12.04 406.08 -11.27 -23.30 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -5.49 Total: -12.41 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -5.70 Total: -2.46 kcal Atomic # 7 Polarization: -2.95 SS G_CDS: 0.02 Total: -2.94 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.78 Total: -4.81 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.43 Total: -6.81 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -12.04 -11.27 -23.30 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_11618758.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.858 kcal (2) G-P(sol) polarization free energy of solvation -12.037 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.303 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds