Wall clock time and date at job start Sat Mar 6 2021 23:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86304 * 109.47298 * 2 1 4 4 C 1.50698 * 109.47284 * 120.00355 * 2 1 3 5 5 C 1.38230 * 120.00446 * 64.99996 * 4 2 1 6 6 C 1.38233 * 120.00414 * 179.97438 * 5 4 2 7 7 C 1.38230 * 119.99843 * 359.97438 * 6 5 4 8 8 C 1.50707 * 120.00061 * 180.02562 * 7 6 5 9 9 C 1.50704 * 109.46970 * 89.99796 * 8 7 6 10 10 O 1.21276 * 119.99818 * 0.02562 * 9 8 7 11 11 N 1.34772 * 119.99566 * 179.97438 * 9 8 7 12 12 C 1.46502 * 119.99789 * 180.02562 * 11 9 8 13 13 C 1.52996 * 109.47331 * 184.77979 * 12 11 9 14 14 C 1.50700 * 112.85018 * 294.75774 * 13 12 11 15 15 C 1.38238 * 120.00007 * 103.14131 * 14 13 12 16 16 C 1.38230 * 120.00203 * 180.02562 * 15 14 13 17 17 C 1.38231 * 120.00175 * 359.95607 * 16 15 14 18 18 C 1.38241 * 119.99881 * 0.28184 * 17 16 15 19 19 C 1.38232 * 120.00226 * 283.16732 * 14 13 12 20 20 C 1.53780 * 113.61888 * 163.56380 * 13 12 11 21 21 C 1.53789 * 87.08046 * 270.80133 * 20 13 12 22 22 H 1.08999 * 113.61086 * 220.01602 * 21 20 13 23 23 O 1.42901 * 113.61393 * 89.11284 * 21 20 13 24 24 C 1.53784 * 87.07867 * 334.56325 * 21 20 13 25 25 C 1.38235 * 119.99934 * 0.27630 * 7 6 5 26 26 C 1.38233 * 120.00279 * 359.51766 * 25 7 6 27 27 H 0.96709 * 113.99954 * 299.99647 * 1 2 3 28 28 H 1.09002 * 109.47187 * 239.99938 * 2 1 3 29 29 H 1.48500 * 109.99957 * 178.68335 * 3 2 1 30 30 H 1.48498 * 109.99826 * 300.00483 * 3 2 1 31 31 H 1.08007 * 119.99892 * 359.97343 * 5 4 2 32 32 H 1.07998 * 120.00246 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.46899 * 330.00068 * 8 7 6 34 34 H 1.09001 * 109.47067 * 209.99990 * 8 7 6 35 35 H 0.96997 * 120.00503 * 0.02562 * 11 9 8 36 36 H 1.09001 * 109.47016 * 64.77381 * 12 11 9 37 37 H 1.08999 * 109.47262 * 304.78122 * 12 11 9 38 38 H 1.08005 * 119.99773 * 0.02562 * 15 14 13 39 39 H 1.08002 * 120.00318 * 179.97438 * 16 15 14 40 40 H 1.08000 * 120.00648 * 180.02562 * 17 16 15 41 41 H 1.07996 * 120.00210 * 179.72522 * 18 17 16 42 42 H 1.08001 * 120.00197 * 0.02562 * 19 14 13 43 43 H 1.09005 * 113.61067 * 25.34266 * 20 13 12 44 44 H 1.08994 * 113.61832 * 156.25031 * 20 13 12 45 45 H 0.96700 * 113.98999 * 179.97438 * 23 21 20 46 46 H 1.08997 * 113.61914 * 270.88841 * 24 21 20 47 47 H 1.08996 * 113.61169 * 139.97898 * 24 21 20 48 48 H 1.08007 * 119.99689 * 179.72681 * 25 7 6 49 49 H 1.07998 * 120.00115 * 180.27458 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6847 -2.0602 1.3983 6 6 2.1460 -2.7120 2.5267 7 6 2.8543 -2.0141 3.4869 8 6 3.3577 -2.7249 4.7168 9 6 4.7390 -3.2672 4.4536 10 8 5.2631 -3.0932 3.3739 11 7 5.3921 -3.9445 5.4185 12 6 6.7350 -4.4712 5.1629 13 6 7.1983 -5.2932 6.3672 14 6 7.3762 -4.4605 7.6106 15 6 6.4226 -4.4990 8.6107 16 6 6.5856 -3.7348 9.7509 17 6 7.7025 -2.9326 9.8916 18 6 8.6537 -2.8903 8.8894 19 6 8.4927 -3.6576 7.7508 20 6 8.3948 -6.2103 6.0637 21 6 7.3694 -7.2834 5.6609 22 1 7.6364 -8.2876 5.9899 23 8 6.9969 -7.2303 4.2823 24 6 6.3761 -6.5727 6.5952 25 6 3.0964 -0.6632 3.3215 26 6 2.6388 -0.0123 2.1911 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7702 0.0321 30 1 1.5614 2.4679 -1.2084 31 1 1.1317 -2.6056 0.6478 32 1 1.9530 -3.7665 2.6580 33 1 2.6853 -3.5469 4.9622 34 1 3.3952 -2.0246 5.5513 35 1 4.9730 -4.0833 6.2822 36 1 7.4252 -3.6433 5.0008 37 1 6.7140 -5.1054 4.2766 38 1 5.5503 -5.1263 8.5011 39 1 5.8404 -3.7646 10.5321 40 1 7.8301 -2.3358 10.7826 41 1 9.5242 -2.2602 8.9973 42 1 9.2374 -3.6268 6.9692 43 1 9.0118 -5.8631 5.2349 44 1 8.9782 -6.4733 6.9460 45 1 6.3526 -7.9030 4.0229 46 1 6.4077 -6.9346 7.6229 47 1 5.3635 -6.5179 6.1956 48 1 3.6460 -0.1171 4.0739 49 1 2.8318 1.0421 2.0598 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_12335836.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:22:30 Heat of formation + Delta-G solvation = -36.095435 kcal Electronic energy + Delta-G solvation = -30892.660577 eV Core-core repulsion = 26751.778558 eV Total energy + Delta-G solvation = -4140.882019 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.95878 -40.89809 -39.84439 -39.37014 -37.57008 -36.41175 -34.90611 -33.96988 -31.96545 -31.86949 -31.83235 -30.17750 -28.19840 -27.07987 -25.65783 -24.52887 -23.73813 -23.29131 -22.51289 -22.06837 -21.19959 -20.01529 -18.68765 -18.37574 -18.01203 -17.81444 -17.30017 -16.86119 -16.50785 -16.43244 -16.18610 -15.95482 -15.78336 -15.64233 -15.52262 -15.31155 -14.73289 -14.68455 -14.49515 -14.37612 -14.33135 -14.03289 -13.94839 -13.70676 -13.34335 -13.16573 -13.15075 -12.91709 -12.82044 -12.75501 -12.31304 -12.13587 -12.00058 -11.89078 -11.78674 -11.62672 -11.26970 -10.86739 -10.75047 -10.35410 -9.95010 -9.87930 -9.78595 -9.69390 -9.53759 -4.97623 0.32082 0.35678 0.41505 0.54282 1.36876 1.71751 1.77261 2.04678 2.18487 2.76297 2.84850 2.96445 3.30818 3.40745 3.52790 3.54887 3.65075 3.69301 3.81761 3.85001 3.91645 4.01594 4.04457 4.09097 4.10124 4.16595 4.27769 4.30366 4.43137 4.51252 4.53478 4.54640 4.59216 4.60049 4.63136 4.70936 4.75837 4.84338 4.94408 4.98165 5.04464 5.06391 5.08693 5.14394 5.17774 5.44975 5.47646 5.51410 5.56514 5.60516 5.62150 5.66122 6.01040 6.07596 6.55907 6.58240 6.63417 7.33948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.686 3.314 4 C -0.120 4.120 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.061 4.061 8 C -0.104 4.104 9 C 0.513 3.487 10 O -0.527 6.527 11 N -0.727 5.727 12 C 0.144 3.856 13 C -0.051 4.051 14 C -0.069 4.069 15 C -0.120 4.120 16 C -0.116 4.116 17 C -0.123 4.123 18 C -0.115 4.115 19 C -0.112 4.112 20 C -0.115 4.115 21 C 0.079 3.921 22 H 0.072 0.928 23 O -0.546 6.546 24 C -0.162 4.162 25 C -0.100 4.100 26 C -0.114 4.114 27 H 0.378 0.622 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.125 0.875 32 H 0.122 0.878 33 H 0.103 0.897 34 H 0.104 0.896 35 H 0.398 0.602 36 H 0.064 0.936 37 H 0.098 0.902 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.083 0.917 44 H 0.101 0.899 45 H 0.382 0.618 46 H 0.095 0.905 47 H 0.078 0.922 48 H 0.124 0.876 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.448 -1.808 7.633 7.977 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.120 4.120 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.061 4.061 8 C -0.143 4.143 9 C 0.299 3.701 10 O -0.403 6.403 11 N -0.379 5.379 12 C 0.021 3.979 13 C -0.051 4.051 14 C -0.069 4.069 15 C -0.138 4.138 16 C -0.134 4.134 17 C -0.141 4.141 18 C -0.133 4.133 19 C -0.130 4.130 20 C -0.153 4.153 21 C 0.020 3.980 22 H 0.090 0.910 23 O -0.352 6.352 24 C -0.200 4.200 25 C -0.118 4.118 26 C -0.131 4.131 27 H 0.225 0.775 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.143 0.857 32 H 0.140 0.860 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.232 0.768 36 H 0.082 0.918 37 H 0.116 0.884 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.102 0.898 44 H 0.120 0.880 45 H 0.230 0.770 46 H 0.113 0.887 47 H 0.096 0.904 48 H 0.142 0.858 49 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -0.054 -0.894 5.844 5.913 hybrid contribution -0.340 -1.160 0.522 1.316 sum -0.394 -2.053 6.366 6.701 Atomic orbital electron populations 1.86503 1.17152 1.81719 1.49183 1.25047 0.85146 1.10085 0.97599 0.94838 0.81247 0.78121 0.87024 1.20302 0.99887 0.95099 0.96702 1.20951 0.98748 0.93741 0.97426 1.21003 0.97818 0.99568 0.93766 1.19261 0.97807 0.93716 0.95352 1.20691 0.94287 1.01562 0.97797 1.20503 0.87342 0.78093 0.84175 1.90764 1.68438 1.56961 1.24101 1.45900 1.18175 1.57312 1.16548 1.21206 0.82913 0.97056 0.96735 1.20927 0.98390 0.93045 0.92737 1.19610 0.94950 0.97400 0.94900 1.21006 0.98979 0.99931 0.93898 1.21168 0.97898 0.96663 0.97709 1.21210 0.94538 0.99195 0.99113 1.21198 0.99255 0.98972 0.93899 1.21002 0.97595 0.96430 0.97938 1.23107 0.95641 0.94423 1.02134 1.22642 0.95567 0.97875 0.81920 0.90998 1.86482 1.65234 1.59212 1.24290 1.23778 0.99356 0.95743 1.01079 1.20910 0.99166 0.93990 0.97767 1.20911 0.98835 0.99102 0.94249 0.77455 0.87002 1.18257 1.18040 0.85707 0.86037 0.87857 0.87796 0.76822 0.91756 0.88407 0.86123 0.85969 0.86051 0.85974 0.86109 0.89807 0.88025 0.76966 0.88656 0.90372 0.85814 0.85655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.70 12.83 -35.23 -0.45 -1.16 16 2 C -0.07 -0.09 2.80 36.00 0.10 0.01 16 3 Si 0.69 0.22 29.80 -169.99 -5.07 -4.85 16 4 C -0.12 -0.23 5.35 -104.62 -0.56 -0.79 16 5 C -0.09 -0.21 9.69 -39.59 -0.38 -0.59 16 6 C -0.10 -0.19 9.70 -39.59 -0.38 -0.58 16 7 C -0.06 -0.09 4.37 -104.62 -0.46 -0.55 16 8 C -0.10 0.09 5.83 -29.03 -0.17 -0.08 16 9 C 0.51 1.05 7.82 -10.99 -0.09 0.96 16 10 O -0.53 -3.59 16.03 5.56 0.09 -3.50 16 11 N -0.73 0.11 5.20 -60.30 -0.31 -0.20 16 12 C 0.14 0.13 4.89 -4.04 -0.02 0.11 16 13 C -0.05 0.07 0.62 -154.85 -0.10 -0.03 16 14 C -0.07 0.05 4.52 -104.62 -0.47 -0.42 16 15 C -0.12 0.16 8.53 -39.58 -0.34 -0.17 16 16 C -0.12 0.11 10.05 -39.59 -0.40 -0.29 16 17 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 18 C -0.12 0.01 10.05 -39.58 -0.40 -0.38 16 19 C -0.11 0.00 9.39 -39.58 -0.37 -0.37 16 20 C -0.12 0.14 6.72 -25.92 -0.17 -0.03 16 21 C 0.08 -0.14 5.28 -25.91 -0.14 -0.27 16 22 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 23 O -0.55 0.22 11.52 -35.23 -0.41 -0.19 16 24 C -0.16 0.41 5.94 -25.92 -0.15 0.25 16 25 C -0.10 -0.15 9.70 -39.58 -0.38 -0.53 16 26 C -0.11 -0.15 8.67 -39.58 -0.34 -0.49 16 27 H 0.38 -1.02 8.70 45.56 0.40 -0.62 16 28 H 0.11 0.22 7.96 -51.93 -0.41 -0.20 16 29 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 30 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 31 H 0.12 0.21 8.06 -52.48 -0.42 -0.21 16 32 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 34 H 0.10 -0.30 8.08 -51.93 -0.42 -0.72 16 35 H 0.40 -0.94 7.77 -40.82 -0.32 -1.25 16 36 H 0.06 0.16 8.14 -51.93 -0.42 -0.27 16 37 H 0.10 0.28 5.94 -51.93 -0.31 -0.03 16 38 H 0.12 -0.37 7.01 -52.48 -0.37 -0.74 16 39 H 0.12 -0.31 8.06 -52.49 -0.42 -0.73 16 40 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 41 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 42 H 0.12 -0.08 8.03 -52.49 -0.42 -0.50 16 43 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 44 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 45 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 46 H 0.10 -0.29 7.43 -51.93 -0.39 -0.68 16 47 H 0.08 -0.20 7.95 -51.93 -0.41 -0.61 16 48 H 0.12 -0.03 8.06 -52.48 -0.42 -0.45 16 49 H 0.13 -0.08 4.91 -52.49 -0.26 -0.34 16 LS Contribution 401.39 15.07 6.05 6.05 Total: 0.00 -9.70 401.39 -12.06 -21.76 By element: Atomic # 1 Polarization: -6.99 SS G_CDS: -6.33 Total: -13.32 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -5.62 Total: -4.59 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.31 Total: -0.20 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -0.77 Total: -4.85 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.07 Total: -4.85 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -9.70 -12.06 -21.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12335836.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.337 kcal (2) G-P(sol) polarization free energy of solvation -9.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.759 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds