Wall clock time and date at job start Sat Mar 6 2021 23:23:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47257 * 2 1 4 4 C 1.50705 * 109.47101 * 240.00553 * 2 1 3 5 5 C 1.37945 * 119.91705 * 299.99340 * 4 2 1 6 6 C 1.39604 * 119.87148 * 179.97438 * 5 4 2 7 7 C 1.47849 * 120.13778 * 179.97438 * 6 5 4 8 8 O 1.21552 * 120.00250 * 0.02562 * 7 6 5 9 9 N 1.34776 * 119.99869 * 180.02562 * 7 6 5 10 10 C 1.46492 * 120.00082 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47166 * 183.29779 * 10 9 7 12 12 C 1.50701 * 112.85341 * 287.76229 * 11 10 9 13 13 C 1.38230 * 119.99957 * 124.23028 * 12 11 10 14 14 C 1.38237 * 120.00102 * 179.77104 * 13 12 11 15 15 C 1.38239 * 119.99661 * 0.50093 * 14 13 12 16 16 C 1.38235 * 119.99751 * 359.75184 * 15 14 13 17 17 C 1.38230 * 119.99739 * 304.50228 * 12 11 10 18 18 C 1.53782 * 113.61320 * 156.45310 * 11 10 9 19 19 C 1.53783 * 87.08215 * 270.88817 * 18 11 10 20 20 H 1.09003 * 113.68977 * 220.01035 * 19 18 11 21 21 O 1.42891 * 113.61512 * 89.11937 * 19 18 11 22 22 C 1.53777 * 87.07857 * 334.56646 * 19 18 11 23 23 C 1.39538 * 119.71768 * 0.26356 * 6 5 4 24 24 C 1.38075 * 119.84642 * 359.48504 * 23 6 5 25 25 Br 1.89093 * 119.94169 * 180.25884 * 24 23 6 26 26 C 1.38356 * 119.92297 * 119.97748 * 4 2 1 27 27 H 0.96690 * 114.00462 * 60.00121 * 1 2 3 28 28 H 1.09003 * 109.47666 * 120.00390 * 2 1 3 29 29 H 1.48497 * 109.99626 * 60.00049 * 3 2 1 30 30 H 1.48492 * 110.00312 * 181.32204 * 3 2 1 31 31 H 1.07997 * 120.06504 * 359.96324 * 5 4 2 32 32 H 0.97005 * 119.99682 * 359.97438 * 9 7 6 33 33 H 1.09001 * 109.47357 * 63.30146 * 10 9 7 34 34 H 1.09000 * 109.47689 * 303.30411 * 10 9 7 35 35 H 1.08000 * 120.00370 * 359.97438 * 13 12 11 36 36 H 1.07995 * 120.00474 * 180.22793 * 14 13 12 37 37 H 1.08002 * 120.00130 * 179.73010 * 15 14 13 38 38 H 1.08001 * 119.99897 * 179.97438 * 16 15 14 39 39 H 1.08002 * 120.00551 * 0.02562 * 17 12 11 40 40 H 1.09000 * 113.61666 * 156.33667 * 18 11 10 41 41 H 1.09000 * 113.61316 * 25.43702 * 18 11 10 42 42 H 0.96702 * 114.00825 * 82.50182 * 21 19 18 43 43 H 1.09007 * 113.61291 * 139.98194 * 22 19 18 44 44 H 1.08999 * 113.61713 * 270.88288 * 22 19 18 45 45 H 1.08006 * 120.07907 * 179.74911 * 23 6 5 46 46 H 1.08000 * 119.85972 * 0.04132 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.5971 -2.0310 -1.4472 6 6 2.0625 -2.6879 -2.5877 7 6 1.7084 -4.1036 -2.8255 8 8 1.0103 -4.6978 -2.0274 9 7 2.1597 -4.7352 -3.9273 10 6 1.8093 -6.1380 -4.1626 11 6 2.5108 -6.6333 -5.4289 12 6 1.9166 -6.0600 -6.6896 13 6 2.7201 -5.3792 -7.5849 14 6 2.1759 -4.8574 -8.7436 15 6 0.8262 -5.0075 -9.0019 16 6 0.0218 -5.6839 -8.1039 17 6 0.5670 -6.2102 -6.9478 18 6 2.6983 -8.1591 -5.4725 19 6 4.0389 -7.9360 -4.7528 20 1 4.8437 -8.5738 -5.1184 21 8 3.9314 -7.9403 -3.3280 22 6 4.0436 -6.5258 -5.3661 23 6 2.8683 -2.0046 -3.4992 24 6 3.1914 -0.6813 -3.2735 25 35 4.2771 0.2495 -4.5106 26 6 2.7262 -0.0362 -2.1404 27 1 -0.3933 0.4416 -0.7650 28 1 1.7924 -0.5139 0.8899 29 1 1.5615 2.4678 1.2085 30 1 3.5345 1.7703 -0.0322 31 1 0.9768 -2.5559 -0.7358 32 1 2.7165 -4.2608 -4.5644 33 1 0.7301 -6.2271 -4.2867 34 1 2.1280 -6.7399 -3.3116 35 1 3.7737 -5.2577 -7.3808 36 1 2.8044 -4.3287 -9.4449 37 1 0.4002 -4.5961 -9.9050 38 1 -1.0328 -5.8008 -8.3055 39 1 -0.0618 -6.7379 -6.2459 40 1 2.8053 -8.5572 -6.4815 41 1 1.9682 -8.7059 -4.8758 42 1 3.9279 -8.8244 -2.9363 43 1 4.3995 -5.7540 -4.6835 44 1 4.5184 -6.4774 -6.3460 45 1 3.2350 -2.5083 -4.3815 46 1 2.9853 0.9977 -1.9658 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_12335870.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:23:00 Heat of formation + Delta-G solvation = -20.342122 kcal Electronic energy + Delta-G solvation = -31582.629097 eV Core-core repulsion = 27258.149809 eV Total energy + Delta-G solvation = -4324.479288 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.05568 -41.28917 -39.88232 -39.26160 -37.69541 -36.47383 -35.19624 -33.62801 -33.14376 -31.92673 -31.68987 -30.47510 -28.83629 -27.04262 -26.94870 -25.41739 -24.29357 -23.21162 -22.82909 -22.29630 -21.50447 -20.04836 -19.09008 -18.66097 -17.92973 -17.76989 -17.61427 -17.28280 -16.58435 -16.43390 -16.36201 -16.07980 -15.91412 -15.73338 -15.48145 -15.26929 -14.99321 -14.82840 -14.45073 -14.41862 -14.28807 -14.11529 -13.98975 -13.58336 -13.31030 -13.20139 -13.06615 -13.02603 -12.66528 -12.22180 -12.20603 -11.97605 -11.96413 -11.92492 -11.57103 -11.50416 -11.30327 -11.18201 -10.73720 -10.60157 -10.33913 -10.07780 -9.92647 -9.81722 -9.60388 -5.05526 -0.53968 -0.18853 0.40586 0.42855 0.50018 1.20719 1.50339 1.59340 1.89036 1.96311 2.44736 2.83699 3.14313 3.24630 3.31324 3.38082 3.49965 3.52481 3.72303 3.75183 3.79019 3.84920 3.92803 3.96484 4.13404 4.15215 4.19814 4.26634 4.28105 4.42408 4.46532 4.51874 4.62325 4.68020 4.72895 4.74842 4.83132 4.85947 4.90453 4.98297 5.05262 5.08540 5.14426 5.17010 5.21406 5.25022 5.36123 5.59905 5.65368 5.67863 6.11070 6.31846 6.70309 6.86404 6.99716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.076 4.076 3 Si 0.774 3.226 4 C -0.115 4.115 5 C -0.030 4.030 6 C -0.135 4.135 7 C 0.557 3.443 8 O -0.574 6.574 9 N -0.702 5.702 10 C 0.147 3.853 11 C -0.046 4.046 12 C -0.073 4.073 13 C -0.123 4.123 14 C -0.122 4.122 15 C -0.133 4.133 16 C -0.129 4.129 17 C -0.126 4.126 18 C -0.146 4.146 19 C 0.079 3.921 20 H 0.087 0.913 21 O -0.568 6.568 22 C -0.128 4.128 23 C -0.046 4.046 24 C -0.097 4.097 25 Br -0.025 7.025 26 C -0.061 4.061 27 H 0.397 0.603 28 H 0.113 0.887 29 H -0.292 1.292 30 H -0.275 1.275 31 H 0.130 0.870 32 H 0.409 0.591 33 H 0.056 0.944 34 H 0.082 0.918 35 H 0.144 0.856 36 H 0.139 0.861 37 H 0.132 0.868 38 H 0.127 0.873 39 H 0.117 0.883 40 H 0.104 0.896 41 H 0.076 0.924 42 H 0.396 0.604 43 H 0.075 0.925 44 H 0.122 0.878 45 H 0.155 0.845 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.182 0.731 -6.733 7.483 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.186 4.186 3 Si 0.678 3.322 4 C -0.116 4.116 5 C -0.049 4.049 6 C -0.139 4.139 7 C 0.345 3.655 8 O -0.455 6.455 9 N -0.353 5.353 10 C 0.024 3.976 11 C -0.046 4.046 12 C -0.073 4.073 13 C -0.141 4.141 14 C -0.140 4.140 15 C -0.151 4.151 16 C -0.147 4.147 17 C -0.144 4.144 18 C -0.184 4.184 19 C 0.020 3.980 20 H 0.105 0.895 21 O -0.376 6.376 22 C -0.165 4.165 23 C -0.067 4.067 24 C -0.176 4.176 25 Br 0.060 6.940 26 C -0.080 4.080 27 H 0.247 0.753 28 H 0.130 0.870 29 H -0.220 1.220 30 H -0.201 1.201 31 H 0.148 0.852 32 H 0.246 0.754 33 H 0.074 0.926 34 H 0.100 0.900 35 H 0.162 0.838 36 H 0.157 0.843 37 H 0.150 0.850 38 H 0.145 0.855 39 H 0.135 0.865 40 H 0.122 0.878 41 H 0.095 0.905 42 H 0.246 0.754 43 H 0.093 0.907 44 H 0.140 0.860 45 H 0.173 0.827 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 3.650 1.535 -5.792 7.016 hybrid contribution -0.344 -1.467 0.402 1.560 sum 3.306 0.068 -5.390 6.324 Atomic orbital electron populations 1.86506 1.16883 1.82172 1.50506 1.25292 0.85598 1.11226 0.96442 0.93812 0.78347 0.74600 0.85459 1.20359 0.99234 0.94213 0.97800 1.21241 0.94941 0.93657 0.95091 1.19877 1.02654 0.93621 0.97761 1.18349 0.79438 0.86464 0.81254 1.90788 1.39643 1.68180 1.46846 1.45679 1.52843 1.13242 1.23582 1.21198 0.98439 0.80950 0.97044 1.20793 0.95689 0.97298 0.90847 1.19635 0.93537 0.98556 0.95582 1.21341 1.00738 0.97923 0.94063 1.21449 0.95415 0.99550 0.97613 1.21443 0.94521 0.99195 0.99934 1.21363 1.00579 0.98226 0.94570 1.21102 0.95179 1.00501 0.97650 1.23670 0.98890 0.93290 1.02550 1.22716 0.96410 0.98025 0.80859 0.89469 1.86461 1.96373 1.35491 1.19323 1.23343 0.93728 0.97162 1.02234 1.21400 0.94255 0.92596 0.98408 1.21725 1.02942 0.95610 0.97369 1.96848 1.65565 1.75102 1.56439 1.21388 0.94593 1.00493 0.91542 0.75305 0.86968 1.21972 1.20120 0.85193 0.75367 0.92591 0.90026 0.83825 0.84329 0.85010 0.85456 0.86514 0.87790 0.90536 0.75390 0.90675 0.86003 0.82719 0.82412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.47 12.76 -148.98 -1.90 -2.38 16 2 C -0.08 0.03 2.82 71.24 0.20 0.23 16 3 Si 0.77 -2.38 29.78 68.60 2.04 -0.33 16 4 C -0.11 -0.05 5.38 -19.90 -0.11 -0.16 16 5 C -0.03 -0.14 9.15 22.53 0.21 0.06 16 6 C -0.14 -0.57 5.87 -20.09 -0.12 -0.68 16 7 C 0.56 4.61 7.77 86.79 0.67 5.29 16 8 O -0.57 -9.59 16.35 -3.88 -0.06 -9.65 16 9 N -0.70 -1.81 5.03 -465.99 -2.35 -4.16 16 10 C 0.15 0.44 4.81 86.38 0.42 0.86 16 11 C -0.05 0.11 0.69 -52.40 -0.04 0.07 16 12 C -0.07 0.09 4.92 -19.87 -0.10 0.00 16 13 C -0.12 0.39 9.14 22.27 0.20 0.59 16 14 C -0.12 0.28 10.05 22.27 0.22 0.51 16 15 C -0.13 0.08 10.05 22.27 0.22 0.31 16 16 C -0.13 -0.10 10.05 22.27 0.22 0.13 16 17 C -0.13 -0.14 9.21 22.27 0.21 0.07 16 18 C -0.15 0.58 7.04 31.12 0.22 0.80 16 19 C 0.08 -0.34 5.28 31.12 0.16 -0.17 16 20 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 21 O -0.57 0.43 11.56 -148.98 -1.72 -1.30 16 22 C -0.13 0.60 6.09 31.12 0.19 0.79 16 23 C -0.05 0.03 9.28 22.54 0.21 0.24 16 24 C -0.10 0.11 6.22 22.28 0.14 0.24 16 25 Br -0.03 0.05 33.69 -20.37 -0.69 -0.63 16 26 C -0.06 0.11 8.41 22.34 0.19 0.29 16 27 H 0.40 -2.98 8.70 -74.06 -0.64 -3.63 16 28 H 0.11 0.10 7.96 -2.39 -0.02 0.08 16 29 H -0.29 -1.27 7.11 99.48 0.71 -0.56 16 30 H -0.27 -0.18 7.11 99.48 0.71 0.53 16 31 H 0.13 1.07 7.65 -2.91 -0.02 1.05 16 32 H 0.41 -0.90 5.99 -92.70 -0.56 -1.46 16 33 H 0.06 0.31 7.12 -2.39 -0.02 0.30 16 34 H 0.08 0.54 6.04 -2.39 -0.01 0.53 16 35 H 0.14 -1.09 5.97 -2.91 -0.02 -1.11 16 36 H 0.14 -0.83 8.06 -2.91 -0.02 -0.85 16 37 H 0.13 -0.46 8.06 -2.91 -0.02 -0.48 16 38 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 39 H 0.12 0.10 7.45 -2.91 -0.02 0.08 16 40 H 0.10 -0.54 8.10 -2.39 -0.02 -0.56 16 41 H 0.08 -0.23 8.10 -2.39 -0.02 -0.25 16 42 H 0.40 -3.08 9.12 -74.06 -0.68 -3.75 16 43 H 0.07 -0.22 7.43 -2.38 -0.02 -0.24 16 44 H 0.12 -1.03 6.25 -2.39 -0.01 -1.04 16 45 H 0.16 -0.79 6.41 -2.91 -0.02 -0.80 16 46 H 0.16 -0.88 4.86 -2.91 -0.01 -0.89 16 Total: 0.00 -20.77 395.07 -2.12 -22.89 By element: Atomic # 1 Polarization: -13.14 SS G_CDS: -0.77 Total: -13.91 kcal Atomic # 6 Polarization: 6.14 SS G_CDS: 3.33 Total: 9.47 kcal Atomic # 7 Polarization: -1.81 SS G_CDS: -2.35 Total: -4.16 kcal Atomic # 8 Polarization: -9.63 SS G_CDS: -3.69 Total: -13.32 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: 2.04 Total: -0.33 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -0.69 Total: -0.63 kcal Total: -20.77 -2.12 -22.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12335870.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.549 kcal (2) G-P(sol) polarization free energy of solvation -20.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds