Wall clock time and date at job start Sat Mar 6 2021 23:23:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.47102 * 2 1 4 4 C 1.50699 * 109.47477 * 120.00116 * 2 1 3 5 5 C 1.38185 * 119.84383 * 254.98035 * 4 2 1 6 6 C 1.38313 * 120.14476 * 179.69849 * 5 4 2 7 7 F 1.35101 * 120.08372 * 180.30074 * 6 5 4 8 8 C 1.39804 * 119.83112 * 0.59379 * 6 5 4 9 9 C 1.47695 * 120.15432 * 179.70233 * 8 6 5 10 10 O 1.21574 * 119.99896 * 359.72910 * 9 8 6 11 11 N 1.34781 * 119.99999 * 179.72536 * 9 8 6 12 12 C 1.46492 * 119.99636 * 180.02562 * 11 9 8 13 13 C 1.53007 * 109.46909 * 174.55415 * 12 11 9 14 14 C 1.50702 * 112.85170 * 73.08428 * 13 12 11 15 15 C 1.38234 * 120.00122 * 245.77520 * 14 13 12 16 16 C 1.38234 * 119.99943 * 179.78736 * 15 14 13 17 17 C 1.38230 * 120.00047 * 0.44089 * 16 15 14 18 18 C 1.38239 * 119.99923 * 359.81438 * 17 16 15 19 19 C 1.38234 * 119.99762 * 66.04720 * 14 13 12 20 20 C 1.53780 * 113.61079 * 301.89195 * 13 12 11 21 21 C 1.53789 * 87.08122 * 270.88057 * 20 13 12 22 22 H 1.08994 * 113.61554 * 220.01663 * 21 20 13 23 23 O 1.42903 * 113.61046 * 89.19959 * 21 20 13 24 24 C 1.53774 * 113.61477 * 204.39383 * 13 12 11 25 25 C 1.39653 * 119.68860 * 359.42993 * 8 6 5 26 26 C 1.38064 * 119.85186 * 0.27421 * 25 8 6 27 27 F 1.35111 * 119.91770 * 179.97438 * 26 25 8 28 28 H 0.96703 * 113.99674 * 300.00110 * 1 2 3 29 29 H 1.09003 * 109.47233 * 240.00428 * 2 1 3 30 30 H 1.48499 * 110.00334 * 178.68248 * 3 2 1 31 31 H 1.48497 * 110.00033 * 300.00061 * 3 2 1 32 32 H 1.08004 * 119.92711 * 0.02562 * 5 4 2 33 33 H 0.96996 * 119.99238 * 359.72519 * 11 9 8 34 34 H 1.09001 * 109.47612 * 294.54445 * 12 11 9 35 35 H 1.09001 * 109.47465 * 54.55251 * 12 11 9 36 36 H 1.08004 * 119.99617 * 0.02562 * 15 14 13 37 37 H 1.07998 * 119.99701 * 180.27486 * 16 15 14 38 38 H 1.08003 * 120.00201 * 179.83170 * 17 16 15 39 39 H 1.07995 * 119.99761 * 180.02562 * 18 17 16 40 40 H 1.08000 * 120.00013 * 359.97438 * 19 14 13 41 41 H 1.08999 * 113.61687 * 25.43010 * 20 13 12 42 42 H 1.09004 * 113.61810 * 156.25538 * 20 13 12 43 43 H 0.96704 * 113.99595 * 180.02562 * 23 21 20 44 44 H 1.09003 * 113.61825 * 203.66049 * 24 13 12 45 45 H 1.09003 * 113.61734 * 334.56404 * 24 13 12 46 46 H 1.08001 * 120.07365 * 180.25281 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4535 0.0197 2.2810 6 6 2.9107 -0.6255 3.4158 7 9 3.4153 0.0900 4.4447 8 6 2.8549 -2.0203 3.4929 9 6 3.3472 -2.7170 4.6986 10 8 3.8067 -2.0777 5.6249 11 7 3.2868 -4.0614 4.7718 12 6 3.7746 -4.7524 5.9680 13 6 3.4694 -6.2473 5.8534 14 6 4.3555 -6.9509 4.8580 15 6 3.8107 -7.4896 3.7074 16 6 4.6242 -8.1311 2.7922 17 6 5.9810 -8.2420 3.0320 18 6 6.5250 -7.7080 4.1852 19 6 5.7122 -7.0626 5.0983 20 6 1.9741 -6.5588 5.6751 21 6 1.8808 -6.6030 7.2095 22 1 1.2394 -7.4002 7.5852 23 8 1.5947 -5.3347 7.8024 24 6 3.3760 -6.9627 7.2114 25 6 2.3263 -2.7513 2.4268 26 6 1.8680 -2.0936 1.3028 27 9 1.3568 -2.7996 0.2704 28 1 -0.3933 0.4417 0.7651 29 1 1.7924 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.4999 1.0969 2.2181 33 1 2.9164 -4.5711 4.0343 34 1 4.8512 -4.6073 6.0578 35 1 3.2784 -4.3467 6.8496 36 1 2.7500 -7.4058 3.5217 37 1 4.1992 -8.5481 1.8912 38 1 6.6161 -8.7457 2.3183 39 1 7.5851 -7.7942 4.3723 40 1 6.1372 -6.6452 5.9991 41 1 1.4084 -5.7421 5.2267 42 1 1.7821 -7.5193 5.1969 43 1 1.5352 -5.3560 8.7673 44 1 3.5673 -8.0343 7.1545 45 1 3.9421 -6.4722 8.0033 46 1 2.2765 -3.8288 2.4815 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:23:12 Heat of formation + Delta-G solvation = -110.994753 kcal Electronic energy + Delta-G solvation = -34815.512543 eV Core-core repulsion = 29888.012314 eV Total energy + Delta-G solvation = -4927.500229 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -50.13920 -50.10896 -42.01149 -41.04181 -39.83305 -39.27525 -37.64872 -36.46653 -35.19566 -33.36231 -31.92425 -31.72870 -31.40283 -29.12673 -27.48368 -26.86843 -24.85671 -24.41681 -23.59860 -23.19982 -22.34593 -21.85420 -20.29071 -19.46028 -18.78948 -18.68686 -18.54978 -17.94825 -17.69282 -17.39315 -17.02253 -16.77480 -16.63160 -16.46419 -16.14087 -16.02197 -15.89925 -15.78323 -15.67424 -15.49025 -15.23998 -15.11599 -14.63592 -14.41227 -14.22381 -14.18951 -14.08013 -13.83690 -13.63533 -13.21441 -13.17239 -13.05656 -13.00728 -12.72087 -12.36165 -12.23394 -12.18096 -11.90123 -11.62114 -11.34920 -11.17801 -10.75498 -10.62084 -10.59893 -10.16855 -9.85235 -9.83194 -9.62977 -5.05478 -0.83713 -0.33997 0.40814 0.47707 1.15469 1.37628 1.61952 1.82419 1.93089 2.22072 2.76132 2.80377 2.82424 3.09201 3.16062 3.26153 3.34481 3.44598 3.52323 3.53822 3.72247 3.74795 3.78334 3.96175 4.11348 4.13181 4.14540 4.26728 4.29269 4.31397 4.42566 4.49641 4.53737 4.62420 4.66106 4.67819 4.68919 4.74223 4.82882 4.85526 4.98438 5.07027 5.12676 5.16126 5.20252 5.23254 5.35444 5.57647 5.62966 5.65380 6.08853 6.26118 6.67824 6.87886 6.94914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.078 4.078 3 Si 0.779 3.221 4 C -0.096 4.096 5 C -0.118 4.118 6 C 0.142 3.858 7 F -0.121 7.121 8 C -0.149 4.149 9 C 0.556 3.444 10 O -0.560 6.560 11 N -0.701 5.701 12 C 0.148 3.852 13 C -0.046 4.046 14 C -0.073 4.073 15 C -0.123 4.123 16 C -0.124 4.124 17 C -0.135 4.135 18 C -0.130 4.130 19 C -0.125 4.125 20 C -0.127 4.127 21 C 0.079 3.921 22 H 0.087 0.913 23 O -0.567 6.567 24 C -0.146 4.146 25 C -0.081 4.081 26 C 0.102 3.898 27 F -0.129 7.129 28 H 0.399 0.601 29 H 0.114 0.886 30 H -0.280 1.280 31 H -0.289 1.289 32 H 0.184 0.816 33 H 0.409 0.591 34 H 0.056 0.944 35 H 0.085 0.915 36 H 0.143 0.857 37 H 0.137 0.863 38 H 0.131 0.869 39 H 0.128 0.872 40 H 0.121 0.879 41 H 0.076 0.924 42 H 0.119 0.881 43 H 0.396 0.604 44 H 0.103 0.897 45 H 0.078 0.922 46 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.569 -3.701 0.474 4.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.187 4.187 3 Si 0.683 3.317 4 C -0.098 4.098 5 C -0.136 4.136 6 C 0.121 3.879 7 F -0.099 7.099 8 C -0.153 4.153 9 C 0.343 3.657 10 O -0.440 6.440 11 N -0.352 5.352 12 C 0.025 3.975 13 C -0.047 4.047 14 C -0.073 4.073 15 C -0.141 4.141 16 C -0.142 4.142 17 C -0.153 4.153 18 C -0.148 4.148 19 C -0.143 4.143 20 C -0.164 4.164 21 C 0.020 3.980 22 H 0.104 0.896 23 O -0.375 6.375 24 C -0.184 4.184 25 C -0.101 4.101 26 C 0.082 3.918 27 F -0.107 7.107 28 H 0.250 0.750 29 H 0.132 0.868 30 H -0.207 1.207 31 H -0.216 1.216 32 H 0.200 0.800 33 H 0.247 0.753 34 H 0.074 0.926 35 H 0.103 0.897 36 H 0.160 0.840 37 H 0.155 0.845 38 H 0.149 0.851 39 H 0.146 0.854 40 H 0.139 0.861 41 H 0.095 0.905 42 H 0.137 0.863 43 H 0.247 0.753 44 H 0.121 0.879 45 H 0.096 0.904 46 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -1.671 -2.823 -0.419 3.307 hybrid contribution 0.376 -1.138 0.080 1.201 sum -1.295 -3.961 -0.339 4.181 Atomic orbital electron populations 1.86554 1.16131 1.82149 1.50564 1.25285 0.86081 1.11517 0.95796 0.93780 0.78280 0.73939 0.85699 1.20586 0.98976 0.92511 0.97719 1.21009 0.99871 1.02102 0.90619 1.17786 0.96183 0.88198 0.85729 1.91612 1.84030 1.77399 1.56885 1.19839 1.06320 0.92699 0.96433 1.18062 0.78724 0.82807 0.86156 1.90859 1.46755 1.66735 1.39630 1.45643 1.63078 1.05412 1.21093 1.21203 0.98700 0.89665 0.87920 1.20808 0.95203 0.92549 0.96099 1.19672 0.93582 0.98618 0.95454 1.21306 1.00887 0.98405 0.93497 1.21443 0.93825 0.99001 0.99952 1.21444 0.96065 1.00042 0.97709 1.21378 1.00494 0.98223 0.94668 1.21125 0.93655 0.99686 0.99829 1.23308 0.93578 1.03871 0.95604 1.22698 0.94710 0.86024 0.94550 0.89560 1.86464 1.93478 1.30716 1.26890 1.23667 0.98039 1.01461 0.95238 1.21269 0.96427 1.02025 0.90340 1.17359 0.99302 0.89244 0.85879 1.91567 1.84460 1.78269 1.56403 0.75003 0.86821 1.20675 1.21588 0.79966 0.75317 0.92608 0.89716 0.83975 0.84474 0.85124 0.85361 0.86101 0.90526 0.86322 0.75348 0.87862 0.90376 0.81095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.97 12.88 -148.98 -1.92 -0.95 16 2 C -0.08 0.19 2.44 71.24 0.17 0.36 16 3 Si 0.78 -3.47 29.90 68.60 2.05 -1.41 16 4 C -0.10 0.17 5.27 -19.78 -0.10 0.06 16 5 C -0.12 0.27 8.62 22.27 0.19 0.46 16 6 C 0.14 0.53 7.28 22.67 0.17 0.70 16 7 F -0.12 -1.11 15.55 44.97 0.70 -0.41 16 8 C -0.15 -0.50 5.88 -20.06 -0.12 -0.62 16 9 C 0.56 4.25 7.77 86.74 0.67 4.92 16 10 O -0.56 -9.09 15.33 -3.95 -0.06 -9.15 16 11 N -0.70 -1.24 5.00 -466.11 -2.33 -3.57 16 12 C 0.15 0.34 4.87 86.38 0.42 0.76 16 13 C -0.05 0.13 0.64 -52.40 -0.03 0.10 16 14 C -0.07 0.11 4.85 -19.87 -0.10 0.02 16 15 C -0.12 0.38 9.05 22.27 0.20 0.58 16 16 C -0.12 0.24 10.05 22.27 0.22 0.46 16 17 C -0.13 0.04 10.05 22.27 0.22 0.26 16 18 C -0.13 -0.09 10.05 22.27 0.22 0.14 16 19 C -0.12 -0.08 9.23 22.27 0.21 0.13 16 20 C -0.13 0.64 5.88 31.12 0.18 0.83 16 21 C 0.08 -0.37 5.27 31.12 0.16 -0.21 16 22 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 23 O -0.57 0.80 11.58 -148.98 -1.73 -0.93 16 24 C -0.15 0.66 6.93 31.12 0.22 0.87 16 25 C -0.08 0.12 9.51 22.57 0.21 0.33 16 26 C 0.10 0.00 7.23 22.33 0.16 0.16 16 27 F -0.13 -0.34 16.73 44.97 0.75 0.41 16 28 H 0.40 -4.24 8.70 -74.06 -0.64 -4.89 16 29 H 0.11 -0.09 7.89 -2.39 -0.02 -0.11 16 30 H -0.28 -0.18 7.11 99.48 0.71 0.52 16 31 H -0.29 -0.81 7.11 99.48 0.71 -0.10 16 32 H 0.18 -1.49 5.10 -2.91 -0.01 -1.50 16 33 H 0.41 -1.38 6.00 -92.71 -0.56 -1.93 16 34 H 0.06 0.28 7.80 -2.39 -0.02 0.26 16 35 H 0.08 0.49 6.05 -2.39 -0.01 0.48 16 36 H 0.14 -1.07 6.41 -2.91 -0.02 -1.09 16 37 H 0.14 -0.74 8.06 -2.91 -0.02 -0.76 16 38 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 39 H 0.13 -0.21 8.06 -2.91 -0.02 -0.23 16 40 H 0.12 -0.03 8.06 -2.91 -0.02 -0.06 16 41 H 0.08 -0.28 7.41 -2.39 -0.02 -0.30 16 42 H 0.12 -0.98 6.79 -2.38 -0.02 -0.99 16 43 H 0.40 -3.33 9.12 -74.05 -0.68 -4.00 16 44 H 0.10 -0.57 8.10 -2.39 -0.02 -0.59 16 45 H 0.08 -0.29 8.10 -2.39 -0.02 -0.31 16 46 H 0.17 -1.18 6.41 -2.91 -0.02 -1.19 16 Total: 0.00 -23.58 386.30 0.00 -23.58 By element: Atomic # 1 Polarization: -17.12 SS G_CDS: -0.75 Total: -17.87 kcal Atomic # 6 Polarization: 7.03 SS G_CDS: 3.29 Total: 10.32 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -2.33 Total: -3.57 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -3.71 Total: -11.03 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 1.45 Total: -0.01 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.05 Total: -1.41 kcal Total: -23.58 0.00 -23.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.418 kcal (2) G-P(sol) polarization free energy of solvation -23.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds