Wall clock time and date at job start Sat Mar 6 2021 23:23:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35660 * 116.99830 * 2 1 4 4 C 1.40134 * 120.15385 * 179.97438 * 3 2 1 5 5 C 1.47540 * 120.18804 * 0.04391 * 4 3 2 6 6 O 1.21588 * 120.00207 * 359.97413 * 5 4 3 7 7 N 1.34774 * 119.99808 * 179.97438 * 5 4 3 8 8 C 1.46507 * 119.99748 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.47003 * 175.21930 * 8 7 5 10 10 C 1.50703 * 112.85166 * 292.18230 * 9 8 7 11 11 C 1.38241 * 119.99992 * 113.51063 * 10 9 8 12 12 C 1.38231 * 119.99459 * 179.78763 * 11 10 9 13 13 C 1.38237 * 120.00539 * 0.44338 * 12 11 10 14 14 C 1.38237 * 119.99710 * 359.81244 * 13 12 11 15 15 C 1.38233 * 119.99896 * 293.78457 * 10 9 8 16 16 C 1.53775 * 113.61688 * 160.87120 * 9 8 7 17 17 C 1.53782 * 87.08574 * 270.88572 * 16 9 8 18 18 H 1.08997 * 113.69319 * 220.00707 * 17 16 9 19 19 O 1.42896 * 113.61243 * 89.11003 * 17 16 9 20 20 C 1.53780 * 87.07666 * 334.56777 * 17 16 9 21 21 C 1.39701 * 119.62142 * 180.02562 * 4 3 2 22 22 C 1.37790 * 119.90580 * 0.02562 * 21 4 3 23 23 C 1.50699 * 119.84944 * 179.97438 * 22 21 4 24 24 O 1.42904 * 109.47120 * 65.00123 * 23 22 21 25 25 Si 1.86296 * 109.47238 * 184.99604 * 23 22 21 26 26 C 1.38550 * 120.30007 * 0.25190 * 22 21 4 27 27 C 1.38053 * 120.39057 * 359.48950 * 26 22 21 28 28 H 1.09000 * 109.47017 * 60.00720 * 1 2 3 29 29 H 1.09002 * 109.46636 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47266 * 300.00375 * 1 2 3 31 31 H 0.96999 * 120.00407 * 359.97438 * 7 5 4 32 32 H 1.08996 * 109.47102 * 295.22022 * 8 7 5 33 33 H 1.08996 * 109.47271 * 55.22136 * 8 7 5 34 34 H 1.07998 * 120.00187 * 0.02562 * 11 10 9 35 35 H 1.07999 * 120.00022 * 180.27301 * 12 11 10 36 36 H 1.08000 * 120.00448 * 179.83209 * 13 12 11 37 37 H 1.07997 * 120.00200 * 180.02562 * 14 13 12 38 38 H 1.07998 * 119.99742 * 359.97438 * 15 10 9 39 39 H 1.09001 * 113.61211 * 25.43602 * 16 9 8 40 40 H 1.09002 * 113.61998 * 156.33762 * 16 9 8 41 41 H 0.96698 * 114.00065 * 82.50785 * 19 17 16 42 42 H 1.09008 * 113.61247 * 270.88142 * 20 17 16 43 43 H 1.09004 * 113.69166 * 139.99341 * 20 17 16 44 44 H 1.07999 * 120.05029 * 180.02562 * 21 4 3 45 45 H 1.09002 * 109.47401 * 304.99868 * 23 22 21 46 46 H 0.96696 * 114.00316 * 59.99382 * 24 23 22 47 47 H 1.48502 * 110.00281 * 179.97438 * 25 23 22 48 48 H 1.48502 * 110.00323 * 301.32259 * 25 23 22 49 49 H 1.08001 * 119.80460 * 179.72570 * 26 22 21 50 50 H 1.07993 * 119.96005 * 180.27830 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4440 1.2859 0.0005 5 6 4.2550 0.0534 0.0001 6 8 3.7096 -1.0333 -0.0002 7 7 5.6005 0.1320 0.0001 8 6 6.4057 -1.0919 0.0003 9 6 7.8869 -0.7278 -0.1200 10 6 8.2377 -0.1389 -1.4621 11 6 8.6376 1.1811 -1.5545 12 6 8.9636 1.7199 -2.7850 13 6 8.8810 0.9415 -3.9243 14 6 8.4760 -0.3771 -3.8326 15 6 8.1542 -0.9172 -2.6014 16 6 8.8359 -1.8515 0.3289 17 6 8.7488 -1.2532 1.7429 18 1 9.6989 -1.2519 2.2772 19 8 7.6743 -1.7816 2.5227 20 6 8.4189 0.0892 1.0693 21 6 4.0666 2.5365 0.0011 22 6 3.3036 3.6838 0.0016 23 6 3.9765 5.0322 0.0028 24 8 4.6991 5.2050 -1.2179 25 14 2.6882 6.3691 0.1562 26 6 1.9204 3.6034 0.0069 27 6 1.2923 2.3740 0.0010 28 1 -0.3633 0.5137 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 6.0357 0.9989 0.0000 32 1 6.2396 -1.6360 0.9300 33 1 6.1158 -1.7177 -0.8437 34 1 8.6991 1.7903 -0.6648 35 1 9.2803 2.7500 -2.8567 36 1 9.1331 1.3632 -4.8861 37 1 8.4118 -0.9854 -4.7226 38 1 7.8379 -1.9473 -2.5297 39 1 8.4014 -2.8479 0.2488 40 1 9.8304 -1.7856 -0.1126 41 1 7.8757 -2.6259 2.9489 42 1 9.2994 0.6858 0.8302 43 1 7.6480 0.6608 1.5861 44 1 5.1445 2.6040 0.0011 45 1 4.6659 5.0936 0.8449 46 1 4.1475 5.1620 -2.0110 47 1 3.3391 7.7039 0.1592 48 1 1.7234 6.2764 -0.9689 49 1 1.3301 4.5078 0.0117 50 1 0.2137 2.3195 0.0006 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_12496546.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:23:17 Heat of formation + Delta-G solvation = -58.741814 kcal Electronic energy + Delta-G solvation = -34601.301410 eV Core-core repulsion = 30140.755178 eV Total energy + Delta-G solvation = -4460.546232 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.96574 -41.46530 -39.65052 -39.26646 -39.18026 -37.21254 -36.33304 -34.82200 -32.69302 -31.90598 -31.81962 -31.70183 -28.84259 -28.23687 -27.01730 -26.18659 -25.24593 -24.33006 -23.21574 -22.57156 -22.27216 -21.20773 -20.08429 -19.31651 -18.64998 -18.40277 -18.04274 -17.71215 -17.23249 -16.80050 -16.50775 -16.41348 -16.21496 -16.02770 -15.83913 -15.78083 -15.66250 -15.46503 -15.22533 -14.70836 -14.53046 -14.50196 -14.25316 -14.11348 -14.00727 -13.67237 -13.51237 -13.32514 -13.18263 -13.09014 -13.02750 -12.72996 -12.40737 -12.24125 -12.21773 -12.04844 -11.89220 -11.67897 -11.61306 -11.29689 -10.83159 -10.73940 -10.45915 -10.16061 -9.81790 -9.75416 -9.58514 -9.22860 -5.01193 -0.17823 0.24291 0.45350 0.51741 1.23423 1.53409 1.91382 1.98344 2.26118 2.28794 2.82006 2.85130 3.03310 3.31699 3.33728 3.49665 3.55508 3.63688 3.68836 3.69174 3.75994 3.93477 4.04187 4.11185 4.13490 4.16411 4.23903 4.24144 4.24976 4.35729 4.39852 4.53957 4.58557 4.60995 4.62258 4.67001 4.70723 4.71894 4.76725 4.90612 4.93609 5.02741 5.03552 5.12667 5.14000 5.16233 5.24849 5.28586 5.54516 5.59795 5.61761 5.65770 5.70522 6.10774 6.34844 6.36067 6.64490 6.70473 7.49201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.278 6.278 3 C 0.193 3.807 4 C -0.172 4.172 5 C 0.561 3.439 6 O -0.518 6.518 7 N -0.722 5.722 8 C 0.147 3.853 9 C -0.051 4.051 10 C -0.067 4.067 11 C -0.120 4.120 12 C -0.115 4.115 13 C -0.123 4.123 14 C -0.116 4.116 15 C -0.111 4.111 16 C -0.151 4.151 17 C 0.081 3.919 18 H 0.072 0.928 19 O -0.546 6.546 20 C -0.128 4.128 21 C -0.019 4.019 22 C -0.167 4.167 23 C -0.068 4.068 24 O -0.529 6.529 25 Si 0.683 3.317 26 C -0.050 4.050 27 C -0.214 4.214 28 H 0.057 0.943 29 H 0.105 0.895 30 H 0.059 0.941 31 H 0.396 0.604 32 H 0.094 0.906 33 H 0.068 0.932 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.120 0.880 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.080 0.920 40 H 0.096 0.904 41 H 0.383 0.617 42 H 0.101 0.899 43 H 0.081 0.919 44 H 0.133 0.867 45 H 0.119 0.881 46 H 0.376 0.624 47 H -0.256 1.256 48 H -0.260 1.260 49 H 0.134 0.866 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.475 1.860 1.749 2.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.175 4.175 5 C 0.348 3.652 6 O -0.394 6.394 7 N -0.375 5.375 8 C 0.024 3.976 9 C -0.052 4.052 10 C -0.067 4.067 11 C -0.138 4.138 12 C -0.133 4.133 13 C -0.141 4.141 14 C -0.134 4.134 15 C -0.129 4.129 16 C -0.189 4.189 17 C 0.021 3.979 18 H 0.090 0.910 19 O -0.352 6.352 20 C -0.166 4.166 21 C -0.038 4.038 22 C -0.167 4.167 23 C -0.178 4.178 24 O -0.336 6.336 25 Si 0.584 3.416 26 C -0.068 4.068 27 C -0.233 4.233 28 H 0.076 0.924 29 H 0.123 0.877 30 H 0.077 0.923 31 H 0.231 0.769 32 H 0.112 0.888 33 H 0.087 0.913 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.138 0.862 39 H 0.099 0.901 40 H 0.114 0.886 41 H 0.231 0.769 42 H 0.120 0.880 43 H 0.100 0.900 44 H 0.151 0.849 45 H 0.137 0.863 46 H 0.224 0.776 47 H -0.181 1.181 48 H -0.185 1.185 49 H 0.151 0.849 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.006 2.134 1.590 2.661 hybrid contribution 0.558 -0.197 -1.166 1.307 sum 0.552 1.937 0.424 2.058 Atomic orbital electron populations 1.23230 0.78285 1.04715 1.01400 1.86392 1.21110 1.25191 1.86185 1.19093 0.90939 0.85042 0.90541 1.19368 0.90922 0.93982 1.13277 1.17876 0.81765 0.88611 0.76938 1.90838 1.71517 1.28554 1.48464 1.45737 1.05766 1.09794 1.76221 1.21196 0.86193 0.86644 1.03561 1.20934 0.94908 0.97813 0.91524 1.19579 0.99271 0.93938 0.93936 1.21050 1.00229 0.94651 0.97836 1.21162 0.99660 0.99888 0.92606 1.21193 0.99938 0.94338 0.98636 1.21172 0.99078 0.95573 0.97591 1.20966 0.99950 0.99896 0.92104 1.23671 0.99831 0.98328 0.97067 1.22627 0.90006 0.94929 0.90304 0.91003 1.86496 1.39409 1.42011 1.67282 1.23247 1.02257 0.96001 0.95052 1.20959 0.99777 0.89907 0.93142 1.20041 0.93523 0.95866 1.07305 1.24934 1.04011 0.99023 0.89867 1.86599 1.37411 1.94207 1.15358 0.95026 0.78854 0.77638 0.90046 1.21017 0.93772 0.97427 0.94576 1.21220 1.00684 0.91569 1.09823 0.92422 0.87698 0.92257 0.76884 0.88833 0.91337 0.85971 0.86011 0.86147 0.86075 0.86228 0.90138 0.88601 0.76935 0.88026 0.89995 0.84920 0.86345 0.77627 1.18084 1.18496 0.84900 0.84197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.22 8.57 -40.56 -0.35 -1.57 16 3 C 0.19 0.62 6.70 -38.69 -0.26 0.36 16 4 C -0.17 -0.58 5.89 -104.85 -0.62 -1.20 16 5 C 0.56 2.89 7.76 -12.47 -0.10 2.80 16 6 O -0.52 -4.58 15.16 -16.59 -0.25 -4.84 16 7 N -0.72 -1.68 5.12 -61.35 -0.31 -1.99 16 8 C 0.15 0.30 4.83 -4.04 -0.02 0.28 16 9 C -0.05 0.01 0.63 -154.85 -0.10 -0.08 16 10 C -0.07 -0.04 4.75 -104.62 -0.50 -0.53 16 11 C -0.12 -0.03 9.05 -39.58 -0.36 -0.38 16 12 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 13 C -0.12 -0.12 10.05 -39.58 -0.40 -0.51 16 14 C -0.12 -0.13 10.05 -39.58 -0.40 -0.53 16 15 C -0.11 -0.14 9.30 -39.58 -0.37 -0.51 16 16 C -0.15 0.19 6.94 -25.92 -0.18 0.01 16 17 C 0.08 -0.10 5.28 -25.92 -0.14 -0.24 16 18 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 19 O -0.55 0.08 11.52 -35.23 -0.41 -0.33 16 20 C -0.13 0.14 5.89 -25.92 -0.15 -0.01 16 21 C -0.02 -0.02 9.16 -39.20 -0.36 -0.38 16 22 C -0.17 0.02 5.35 -104.67 -0.56 -0.54 16 23 C -0.07 0.07 2.79 36.01 0.10 0.17 16 24 O -0.53 -0.22 12.83 -35.23 -0.45 -0.67 16 25 Si 0.68 -1.07 29.86 -169.99 -5.08 -6.14 16 26 C -0.05 0.03 8.65 -39.53 -0.34 -0.32 16 27 C -0.21 -0.09 9.03 -39.47 -0.36 -0.45 16 28 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 29 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 31 H 0.40 0.18 6.01 -40.82 -0.25 -0.07 16 32 H 0.09 0.31 5.97 -51.93 -0.31 0.00 16 33 H 0.07 0.23 7.91 -51.93 -0.41 -0.18 16 34 H 0.12 -0.17 6.44 -52.49 -0.34 -0.51 16 35 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 36 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 37 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 38 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 39 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 40 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 41 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 42 H 0.10 -0.22 6.83 -51.92 -0.35 -0.58 16 43 H 0.08 -0.03 7.61 -51.93 -0.40 -0.43 16 44 H 0.13 -0.07 6.40 -52.49 -0.34 -0.41 16 45 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 46 H 0.38 -0.76 8.70 45.56 0.40 -0.36 16 47 H -0.26 -0.47 7.11 56.52 0.40 -0.06 16 48 H -0.26 -0.07 7.01 56.52 0.40 0.33 16 49 H 0.13 -0.34 4.81 -52.49 -0.25 -0.60 16 50 H 0.14 -0.26 6.30 -52.49 -0.33 -0.59 16 LS Contribution 403.24 15.07 6.08 6.08 Total: 0.00 -9.95 403.24 -11.22 -21.17 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -5.95 Total: -10.17 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: -4.50 Total: -1.54 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -0.31 Total: -1.99 kcal Atomic # 8 Polarization: -5.95 SS G_CDS: -1.46 Total: -7.40 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.08 Total: -6.14 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.95 -11.22 -21.17 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12496546.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.572 kcal (2) G-P(sol) polarization free energy of solvation -9.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.170 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds