Wall clock time and date at job start Sat Mar 6 2021 23:23:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47475 * 2 1 4 4 C 1.50697 * 109.46712 * 120.00069 * 2 1 3 5 5 C 1.38638 * 119.94075 * 194.99750 * 4 2 1 6 6 F 1.35103 * 119.88026 * 0.02562 * 5 4 2 7 7 C 1.38676 * 120.24242 * 179.97438 * 5 4 2 8 8 C 1.37814 * 120.11678 * 0.02562 * 7 5 4 9 9 C 1.39675 * 119.88184 * 359.97438 * 8 7 5 10 10 C 1.47715 * 120.12007 * 180.02562 * 9 8 7 11 11 O 1.21570 * 120.00203 * 180.02562 * 10 9 8 12 12 N 1.34783 * 120.00105 * 0.02562 * 10 9 8 13 13 C 1.46499 * 120.00220 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47249 * 176.14234 * 13 12 10 15 15 C 1.50704 * 112.84407 * 73.47348 * 14 13 12 16 16 C 1.38240 * 119.99737 * 246.00624 * 15 14 13 17 17 C 1.38231 * 119.99301 * 179.75026 * 16 15 14 18 18 C 1.38229 * 120.00408 * 0.55030 * 17 16 15 19 19 C 1.38237 * 120.00043 * 359.70703 * 18 17 16 20 20 C 1.38224 * 119.99820 * 0.02562 * 19 18 17 21 21 C 1.53784 * 113.61282 * 302.28092 * 14 13 12 22 22 C 1.53780 * 87.07632 * 270.88152 * 21 14 13 23 23 H 1.09002 * 113.61343 * 220.02002 * 22 21 14 24 24 O 1.42900 * 113.61409 * 89.11918 * 22 21 14 25 25 C 1.53773 * 113.61598 * 204.78207 * 14 13 12 26 26 C 1.37853 * 119.94424 * 14.72314 * 4 2 1 27 27 H 0.96704 * 113.99592 * 60.00073 * 1 2 3 28 28 H 1.09003 * 109.47151 * 239.99668 * 2 1 3 29 29 H 1.48498 * 109.99831 * 59.99863 * 3 2 1 30 30 H 1.48498 * 110.00182 * 181.31645 * 3 2 1 31 31 H 1.07994 * 119.94340 * 180.02562 * 7 5 4 32 32 H 1.08005 * 120.05828 * 180.02562 * 8 7 5 33 33 H 0.97000 * 119.99530 * 0.02562 * 12 10 9 34 34 H 1.08998 * 109.47390 * 296.14473 * 13 12 10 35 35 H 1.08998 * 109.46481 * 56.14368 * 13 12 10 36 36 H 1.07999 * 120.00252 * 0.02562 * 16 15 14 37 37 H 1.08010 * 119.99458 * 180.27372 * 17 16 15 38 38 H 1.08006 * 119.99878 * 179.72386 * 18 17 16 39 39 H 1.07998 * 120.00038 * 180.02562 * 19 18 17 40 40 H 1.08004 * 120.00195 * 179.97438 * 20 19 18 41 41 H 1.08997 * 113.61383 * 25.43149 * 21 14 13 42 42 H 1.08996 * 113.61051 * 156.33360 * 21 14 13 43 43 H 0.96696 * 113.99731 * 179.97438 * 24 22 21 44 44 H 1.08997 * 113.61416 * 203.66828 * 25 14 13 45 45 H 1.09007 * 113.61532 * 334.56670 * 25 14 13 46 46 H 1.08000 * 120.06231 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 3.2559 -0.5740 1.6160 6 9 4.0931 0.1963 0.8872 7 6 3.7246 -1.2245 2.7475 8 6 2.8748 -2.0111 3.4948 9 6 1.5392 -2.1521 3.1110 10 6 0.6237 -2.9934 3.9084 11 8 -0.5383 -3.1149 3.5721 12 7 1.0764 -3.6263 5.0088 13 6 0.1683 -4.4603 5.8000 14 6 0.9492 -5.1351 6.9295 15 6 1.3218 -4.1806 8.0347 16 6 2.6503 -3.8781 8.2681 17 6 2.9916 -2.9986 9.2784 18 6 2.0053 -2.4305 10.0627 19 6 0.6772 -2.7371 9.8328 20 6 0.3354 -3.6122 8.8189 21 6 2.1243 -5.9962 6.4371 22 6 1.1295 -7.1660 6.3541 23 1 1.5442 -8.1165 6.6899 24 8 0.4648 -7.2638 5.0929 25 6 0.3057 -6.4390 7.4299 26 6 1.0713 -1.4902 1.9739 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7702 -0.0321 31 1 4.7573 -1.1146 3.0436 32 1 3.2407 -2.5170 4.3761 33 1 2.0034 -3.5290 5.2773 34 1 -0.6196 -3.8380 6.2244 35 1 -0.2758 -5.2223 5.1596 36 1 3.4212 -4.3255 7.6582 37 1 4.0294 -2.7589 9.4579 38 1 2.2724 -1.7468 10.8550 39 1 -0.0935 -2.2928 10.4453 40 1 -0.7022 -3.8521 8.6395 41 1 2.5163 -5.6869 5.4683 42 1 2.9045 -6.1387 7.1847 43 1 -0.1619 -7.9979 5.0345 44 1 0.5888 -6.7025 8.4490 45 1 -0.7704 -6.4871 7.2626 46 1 0.0385 -1.5927 1.6751 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:23:21 Heat of formation + Delta-G solvation = -61.862637 kcal Electronic energy + Delta-G solvation = -31969.585759 eV Core-core repulsion = 27513.670033 eV Total energy + Delta-G solvation = -4455.915725 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.41676 -42.02479 -41.00457 -39.51022 -39.27097 -37.63700 -36.44833 -35.03387 -32.97077 -32.09313 -31.91282 -31.78267 -28.71562 -27.14428 -26.93271 -25.23841 -24.13616 -23.29361 -23.20115 -22.44384 -21.25477 -20.10043 -19.16181 -18.78131 -18.72317 -18.26861 -17.79746 -17.55162 -17.13681 -16.60608 -16.51462 -16.25125 -16.00393 -15.84395 -15.76781 -15.65009 -15.32709 -15.10850 -14.85169 -14.68701 -14.48505 -14.29138 -14.21946 -14.10271 -13.69783 -13.52047 -13.32772 -13.15886 -13.04453 -12.81943 -12.70276 -12.32938 -12.17760 -11.97200 -11.71295 -11.55913 -11.37604 -10.95547 -10.87961 -10.81779 -10.09445 -9.93598 -9.87732 -9.67848 -9.63144 -4.93595 -0.47366 0.03590 0.36166 0.42579 1.25910 1.69379 1.76663 2.03695 2.09774 2.67219 2.76127 2.87108 2.96586 3.08429 3.24565 3.39645 3.41367 3.56278 3.64551 3.67332 3.75802 3.89691 3.96050 4.02269 4.05070 4.15076 4.16973 4.28283 4.31448 4.50268 4.53467 4.54815 4.59741 4.62214 4.67899 4.77327 4.82683 4.84713 4.93974 4.94479 5.04757 5.07667 5.09920 5.13011 5.15871 5.41709 5.51441 5.57168 5.59872 5.61783 6.01822 6.49518 6.55668 6.59099 7.25294 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.069 4.069 3 Si 0.675 3.325 4 C -0.118 4.118 5 C 0.106 3.894 6 F -0.118 7.118 7 C -0.151 4.151 8 C -0.061 4.061 9 C -0.141 4.141 10 C 0.561 3.439 11 O -0.528 6.528 12 N -0.718 5.718 13 C 0.146 3.854 14 C -0.052 4.052 15 C -0.070 4.070 16 C -0.122 4.122 17 C -0.117 4.117 18 C -0.122 4.122 19 C -0.115 4.115 20 C -0.111 4.111 21 C -0.129 4.129 22 C 0.081 3.919 23 H 0.072 0.928 24 O -0.546 6.546 25 C -0.150 4.150 26 C -0.005 4.005 27 H 0.389 0.611 28 H 0.084 0.916 29 H -0.258 1.258 30 H -0.229 1.229 31 H 0.147 0.853 32 H 0.137 0.863 33 H 0.397 0.603 34 H 0.068 0.932 35 H 0.097 0.903 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.081 0.919 42 H 0.102 0.898 43 H 0.383 0.617 44 H 0.096 0.904 45 H 0.081 0.919 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.368 -1.625 1.068 3.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.178 4.178 3 Si 0.574 3.426 4 C -0.119 4.119 5 C 0.087 3.913 6 F -0.096 7.096 7 C -0.170 4.170 8 C -0.080 4.080 9 C -0.145 4.145 10 C 0.348 3.652 11 O -0.405 6.405 12 N -0.370 5.370 13 C 0.023 3.977 14 C -0.052 4.052 15 C -0.070 4.070 16 C -0.139 4.139 17 C -0.135 4.135 18 C -0.140 4.140 19 C -0.133 4.133 20 C -0.129 4.129 21 C -0.166 4.166 22 C 0.021 3.979 23 H 0.090 0.910 24 O -0.352 6.352 25 C -0.189 4.189 26 C -0.024 4.024 27 H 0.237 0.763 28 H 0.102 0.898 29 H -0.183 1.183 30 H -0.153 1.153 31 H 0.165 0.835 32 H 0.155 0.845 33 H 0.233 0.767 34 H 0.086 0.914 35 H 0.115 0.885 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.100 0.900 42 H 0.120 0.880 43 H 0.231 0.769 44 H 0.115 0.885 45 H 0.099 0.901 46 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 2.479 -0.899 1.667 3.120 hybrid contribution 0.414 -0.826 0.609 1.106 sum 2.893 -1.725 2.276 4.065 Atomic orbital electron populations 1.86404 1.16634 1.81948 1.50060 1.24542 0.86299 1.10421 0.96545 0.95969 0.80977 0.76167 0.89442 1.19415 0.92029 1.01128 0.99328 1.17750 0.87489 0.94071 0.92026 1.91492 1.70847 1.71388 1.75914 1.21025 1.01758 0.99421 0.94747 1.21165 0.92026 0.96187 0.98611 1.20070 0.94196 1.01981 0.98222 1.18017 0.87326 0.79465 0.80350 1.90816 1.17606 1.62588 1.69511 1.45737 1.14356 1.49741 1.27144 1.21242 0.91235 0.94027 0.91219 1.20931 0.97790 0.92965 0.93542 1.19602 0.93442 0.97558 0.96362 1.21055 0.95528 0.98756 0.98603 1.21170 0.99517 0.97065 0.95699 1.21213 0.93105 1.00005 0.99710 1.21192 0.96507 0.97827 0.97802 1.20983 0.99209 0.97143 0.95558 1.23245 0.96136 0.94775 1.02421 1.22622 0.93673 0.97483 0.84108 0.90961 1.86503 1.60273 1.55365 1.33054 1.23678 1.00997 0.94237 0.99949 1.20992 1.00929 0.90070 0.90432 0.76293 0.89791 1.18261 1.15345 0.83503 0.84549 0.76728 0.91394 0.88476 0.85953 0.85976 0.86049 0.85957 0.86113 0.90004 0.87968 0.76869 0.88547 0.90072 0.82335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.38 11.47 -35.23 -0.40 -0.78 16 2 C -0.07 -0.06 2.96 36.00 0.11 0.05 16 3 Si 0.68 0.15 30.73 -169.99 -5.22 -5.07 16 4 C -0.12 -0.36 5.15 -104.62 -0.54 -0.90 16 5 C 0.11 0.27 6.67 -39.27 -0.26 0.01 16 6 F -0.12 -0.37 12.85 2.25 0.03 -0.34 16 7 C -0.15 -0.10 10.01 -39.57 -0.40 -0.50 16 8 C -0.06 -0.02 9.54 -39.20 -0.37 -0.40 16 9 C -0.14 -0.42 5.87 -104.97 -0.62 -1.03 16 10 C 0.56 2.37 7.77 -12.39 -0.10 2.27 16 11 O -0.53 -4.18 16.34 5.30 0.09 -4.10 16 12 N -0.72 -0.95 5.02 -61.29 -0.31 -1.26 16 13 C 0.15 0.18 4.86 -4.04 -0.02 0.16 16 14 C -0.05 0.05 0.65 -154.85 -0.10 -0.05 16 15 C -0.07 0.02 4.85 -104.62 -0.51 -0.49 16 16 C -0.12 0.10 9.05 -39.58 -0.36 -0.26 16 17 C -0.12 0.04 10.05 -39.59 -0.40 -0.36 16 18 C -0.12 -0.02 10.05 -39.59 -0.40 -0.41 16 19 C -0.12 -0.05 10.05 -39.59 -0.40 -0.44 16 20 C -0.11 -0.04 9.23 -39.59 -0.37 -0.41 16 21 C -0.13 0.23 5.87 -25.92 -0.15 0.08 16 22 C 0.08 -0.14 5.28 -25.92 -0.14 -0.28 16 23 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 24 O -0.55 0.24 11.58 -35.23 -0.41 -0.17 16 25 C -0.15 0.28 6.92 -25.93 -0.18 0.10 16 26 C -0.01 -0.02 8.90 -39.20 -0.35 -0.37 16 27 H 0.39 -1.72 8.74 45.56 0.40 -1.32 16 28 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 29 H -0.26 -1.06 7.11 56.52 0.40 -0.66 16 30 H -0.23 -0.56 5.39 56.52 0.30 -0.26 16 31 H 0.15 -0.25 8.06 -52.49 -0.42 -0.67 16 32 H 0.14 -0.37 6.40 -52.48 -0.34 -0.70 16 33 H 0.40 -0.36 5.92 -40.82 -0.24 -0.60 16 34 H 0.07 0.15 7.80 -51.93 -0.41 -0.25 16 35 H 0.10 0.26 6.06 -51.93 -0.31 -0.05 16 36 H 0.12 -0.32 6.42 -52.49 -0.34 -0.66 16 37 H 0.12 -0.24 8.06 -52.48 -0.42 -0.66 16 38 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 39 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 40 H 0.12 -0.04 8.06 -52.48 -0.42 -0.47 16 41 H 0.08 -0.09 7.35 -51.93 -0.38 -0.47 16 42 H 0.10 -0.30 6.80 -51.93 -0.35 -0.65 16 43 H 0.38 -1.55 9.12 45.56 0.42 -1.13 16 44 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 45 H 0.08 -0.15 8.10 -51.92 -0.42 -0.57 16 46 H 0.16 0.80 6.71 -52.49 -0.35 0.45 16 LS Contribution 378.16 15.07 5.70 5.70 Total: 0.00 -9.69 378.16 -11.06 -20.75 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -4.99 Total: -11.51 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: -5.54 Total: -3.22 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.31 Total: -1.26 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.73 Total: -5.05 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.03 Total: -0.34 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -5.22 Total: -5.07 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.69 -11.06 -20.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.110 kcal (2) G-P(sol) polarization free energy of solvation -9.690 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds