Wall clock time and date at job start Sat Mar 6 2021 23:23:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47475 * 2 1 4 4 C 1.50697 * 109.46712 * 120.00069 * 2 1 3 5 5 C 1.38638 * 119.94075 * 194.99750 * 4 2 1 6 6 F 1.35103 * 119.88026 * 0.02562 * 5 4 2 7 7 C 1.38676 * 120.24242 * 179.97438 * 5 4 2 8 8 C 1.37814 * 120.11678 * 0.02562 * 7 5 4 9 9 C 1.39675 * 119.88184 * 359.97438 * 8 7 5 10 10 C 1.47715 * 120.12007 * 180.02562 * 9 8 7 11 11 O 1.21570 * 120.00203 * 180.02562 * 10 9 8 12 12 N 1.34783 * 120.00105 * 0.02562 * 10 9 8 13 13 C 1.46499 * 120.00220 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47249 * 176.14234 * 13 12 10 15 15 C 1.50704 * 112.84407 * 73.47348 * 14 13 12 16 16 C 1.38240 * 119.99737 * 246.00624 * 15 14 13 17 17 C 1.38231 * 119.99301 * 179.75026 * 16 15 14 18 18 C 1.38229 * 120.00408 * 0.55030 * 17 16 15 19 19 C 1.38237 * 120.00043 * 359.70703 * 18 17 16 20 20 C 1.38224 * 119.99820 * 0.02562 * 19 18 17 21 21 C 1.53784 * 113.61282 * 302.28092 * 14 13 12 22 22 C 1.53780 * 87.07632 * 270.88152 * 21 14 13 23 23 H 1.09002 * 113.61343 * 220.02002 * 22 21 14 24 24 O 1.42900 * 113.61409 * 89.11918 * 22 21 14 25 25 C 1.53773 * 113.61598 * 204.78207 * 14 13 12 26 26 C 1.37853 * 119.94424 * 14.72314 * 4 2 1 27 27 H 0.96704 * 113.99592 * 60.00073 * 1 2 3 28 28 H 1.09003 * 109.47151 * 239.99668 * 2 1 3 29 29 H 1.48498 * 109.99831 * 59.99863 * 3 2 1 30 30 H 1.48498 * 110.00182 * 181.31645 * 3 2 1 31 31 H 1.07994 * 119.94340 * 180.02562 * 7 5 4 32 32 H 1.08005 * 120.05828 * 180.02562 * 8 7 5 33 33 H 0.97000 * 119.99530 * 0.02562 * 12 10 9 34 34 H 1.08998 * 109.47390 * 296.14473 * 13 12 10 35 35 H 1.08998 * 109.46481 * 56.14368 * 13 12 10 36 36 H 1.07999 * 120.00252 * 0.02562 * 16 15 14 37 37 H 1.08010 * 119.99458 * 180.27372 * 17 16 15 38 38 H 1.08006 * 119.99878 * 179.72386 * 18 17 16 39 39 H 1.07998 * 120.00038 * 180.02562 * 19 18 17 40 40 H 1.08004 * 120.00195 * 179.97438 * 20 19 18 41 41 H 1.08997 * 113.61383 * 25.43149 * 21 14 13 42 42 H 1.08996 * 113.61051 * 156.33360 * 21 14 13 43 43 H 0.96696 * 113.99731 * 179.97438 * 24 22 21 44 44 H 1.08997 * 113.61416 * 203.66828 * 25 14 13 45 45 H 1.09007 * 113.61532 * 334.56670 * 25 14 13 46 46 H 1.08000 * 120.06231 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 3.2559 -0.5740 1.6160 6 9 4.0931 0.1963 0.8872 7 6 3.7246 -1.2245 2.7475 8 6 2.8748 -2.0111 3.4948 9 6 1.5392 -2.1521 3.1110 10 6 0.6237 -2.9934 3.9084 11 8 -0.5383 -3.1149 3.5721 12 7 1.0764 -3.6263 5.0088 13 6 0.1683 -4.4603 5.8000 14 6 0.9492 -5.1351 6.9295 15 6 1.3218 -4.1806 8.0347 16 6 2.6503 -3.8781 8.2681 17 6 2.9916 -2.9986 9.2784 18 6 2.0053 -2.4305 10.0627 19 6 0.6772 -2.7371 9.8328 20 6 0.3354 -3.6122 8.8189 21 6 2.1243 -5.9962 6.4371 22 6 1.1295 -7.1660 6.3541 23 1 1.5442 -8.1165 6.6899 24 8 0.4648 -7.2638 5.0929 25 6 0.3057 -6.4390 7.4299 26 6 1.0713 -1.4902 1.9739 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7702 -0.0321 31 1 4.7573 -1.1146 3.0436 32 1 3.2407 -2.5170 4.3761 33 1 2.0034 -3.5290 5.2773 34 1 -0.6196 -3.8380 6.2244 35 1 -0.2758 -5.2223 5.1596 36 1 3.4212 -4.3255 7.6582 37 1 4.0294 -2.7589 9.4579 38 1 2.2724 -1.7468 10.8550 39 1 -0.0935 -2.2928 10.4453 40 1 -0.7022 -3.8521 8.6395 41 1 2.5163 -5.6869 5.4683 42 1 2.9045 -6.1387 7.1847 43 1 -0.1619 -7.9979 5.0345 44 1 0.5888 -6.7025 8.4490 45 1 -0.7704 -6.4871 7.2626 46 1 0.0385 -1.5927 1.6751 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:23:20 Heat of formation + Delta-G solvation = -62.078975 kcal Electronic energy + Delta-G solvation = -31969.595140 eV Core-core repulsion = 27513.670033 eV Total energy + Delta-G solvation = -4455.925107 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.60267 -42.03541 -41.14598 -39.64292 -39.26375 -37.69412 -36.47564 -35.18454 -33.07409 -32.19797 -31.89388 -31.72283 -28.80383 -27.10100 -26.93025 -25.29453 -24.22689 -23.33762 -23.21232 -22.34868 -21.49655 -20.07270 -19.26744 -18.90816 -18.63092 -18.38324 -17.70168 -17.67873 -17.31929 -16.75598 -16.57660 -16.31488 -16.15006 -15.85311 -15.80697 -15.66477 -15.25707 -15.24848 -14.92945 -14.82889 -14.44448 -14.37040 -14.24148 -14.10299 -13.81395 -13.64593 -13.28465 -13.19442 -13.06893 -12.83664 -12.72956 -12.26807 -12.23441 -11.90663 -11.76038 -11.62606 -11.34669 -11.17838 -10.98182 -10.74798 -10.30244 -10.07950 -9.84143 -9.73631 -9.63162 -4.99220 -0.65571 -0.09119 0.40659 0.47559 1.18844 1.52727 1.61662 1.90843 1.94168 2.46838 2.78690 2.81550 3.02761 3.15424 3.33321 3.35255 3.43382 3.53683 3.67443 3.72413 3.74380 3.90097 3.94992 4.09388 4.11842 4.13598 4.26352 4.28720 4.41257 4.46049 4.51501 4.61898 4.67230 4.67762 4.73398 4.75231 4.82161 4.83612 4.93464 4.95538 4.99356 5.06971 5.12798 5.16176 5.19601 5.25058 5.47083 5.57251 5.62602 5.65291 6.08813 6.32931 6.80247 6.86532 7.00671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.078 4.078 3 Si 0.768 3.232 4 C -0.133 4.133 5 C 0.091 3.909 6 F -0.122 7.122 7 C -0.143 4.143 8 C -0.050 4.050 9 C -0.153 4.153 10 C 0.558 3.442 11 O -0.576 6.576 12 N -0.701 5.701 13 C 0.148 3.852 14 C -0.046 4.046 15 C -0.073 4.073 16 C -0.122 4.122 17 C -0.123 4.123 18 C -0.135 4.135 19 C -0.131 4.131 20 C -0.127 4.127 21 C -0.125 4.125 22 C 0.079 3.921 23 H 0.088 0.912 24 O -0.568 6.568 25 C -0.147 4.147 26 C -0.025 4.025 27 H 0.409 0.591 28 H 0.104 0.896 29 H -0.314 1.314 30 H -0.256 1.256 31 H 0.178 0.822 32 H 0.172 0.828 33 H 0.410 0.590 34 H 0.052 0.948 35 H 0.082 0.918 36 H 0.145 0.855 37 H 0.140 0.860 38 H 0.131 0.869 39 H 0.127 0.873 40 H 0.119 0.881 41 H 0.077 0.923 42 H 0.121 0.879 43 H 0.396 0.604 44 H 0.104 0.896 45 H 0.076 0.924 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.598 -2.219 1.480 5.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.187 4.187 3 Si 0.673 3.327 4 C -0.134 4.134 5 C 0.072 3.928 6 F -0.101 7.101 7 C -0.161 4.161 8 C -0.068 4.068 9 C -0.156 4.156 10 C 0.346 3.654 11 O -0.457 6.457 12 N -0.352 5.352 13 C 0.025 3.975 14 C -0.046 4.046 15 C -0.073 4.073 16 C -0.140 4.140 17 C -0.141 4.141 18 C -0.153 4.153 19 C -0.149 4.149 20 C -0.145 4.145 21 C -0.162 4.162 22 C 0.020 3.980 23 H 0.105 0.895 24 O -0.376 6.376 25 C -0.185 4.185 26 C -0.044 4.044 27 H 0.261 0.739 28 H 0.121 0.879 29 H -0.243 1.243 30 H -0.182 1.182 31 H 0.195 0.805 32 H 0.189 0.811 33 H 0.248 0.752 34 H 0.070 0.930 35 H 0.100 0.900 36 H 0.163 0.837 37 H 0.157 0.843 38 H 0.149 0.851 39 H 0.145 0.855 40 H 0.137 0.863 41 H 0.096 0.904 42 H 0.139 0.861 43 H 0.246 0.754 44 H 0.122 0.878 45 H 0.094 0.906 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.721 -1.517 2.065 5.371 hybrid contribution -0.301 -0.623 0.537 0.876 sum 4.420 -2.141 2.602 5.558 Atomic orbital electron populations 1.86381 1.16684 1.82506 1.51679 1.24749 0.86526 1.10912 0.96516 0.95018 0.77844 0.73529 0.86350 1.19682 0.92414 1.01215 1.00103 1.17993 0.87360 0.94646 0.92849 1.91485 1.70853 1.71606 1.76162 1.21400 1.03110 0.98030 0.93542 1.21471 0.90523 0.95540 0.99267 1.20086 0.95280 1.02152 0.98065 1.18305 0.86907 0.79425 0.80792 1.90785 1.19623 1.64400 1.70870 1.45631 1.14961 1.48599 1.26049 1.21176 0.91390 0.93378 0.91570 1.20799 0.98308 0.92990 0.92534 1.19674 0.93726 0.97591 0.96309 1.21316 0.95664 0.98384 0.98598 1.21454 1.00282 0.96853 0.95519 1.21448 0.93152 1.00412 1.00296 1.21369 0.97119 0.98209 0.98163 1.21119 0.99544 0.97710 0.96106 1.23307 0.96085 0.94194 1.02628 1.22711 0.93533 0.98233 0.83558 0.89464 1.86468 1.60877 1.56389 1.33886 1.23675 1.00805 0.93646 1.00377 1.20880 1.00346 0.91564 0.91624 0.73931 0.87868 1.24290 1.18225 0.80508 0.81105 0.75189 0.92970 0.89985 0.83722 0.84264 0.85103 0.85474 0.86324 0.90422 0.86127 0.75393 0.87799 0.90557 0.84461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.43 11.47 -148.98 -1.71 -3.14 16 2 C -0.08 -0.18 2.96 71.24 0.21 0.03 16 3 Si 0.77 0.79 30.73 68.60 2.11 2.90 16 4 C -0.13 -0.94 5.15 -19.86 -0.10 -1.04 16 5 C 0.09 0.45 6.67 22.47 0.15 0.60 16 6 F -0.12 -0.74 12.85 44.97 0.58 -0.16 16 7 C -0.14 0.02 10.01 22.27 0.22 0.24 16 8 C -0.05 0.02 9.54 22.52 0.21 0.24 16 9 C -0.15 -1.04 5.87 -20.09 -0.12 -1.16 16 10 C 0.56 5.59 7.77 86.75 0.67 6.26 16 11 O -0.58 -10.86 16.34 -3.94 -0.06 -10.93 16 12 N -0.70 -2.18 5.02 -466.09 -2.34 -4.52 16 13 C 0.15 0.54 4.86 86.38 0.42 0.96 16 14 C -0.05 0.10 0.65 -52.40 -0.03 0.07 16 15 C -0.07 0.08 4.85 -19.86 -0.10 -0.02 16 16 C -0.12 0.39 9.05 22.27 0.20 0.59 16 17 C -0.12 0.26 10.05 22.27 0.22 0.48 16 18 C -0.14 0.01 10.05 22.27 0.22 0.23 16 19 C -0.13 -0.17 10.05 22.27 0.22 0.05 16 20 C -0.13 -0.18 9.23 22.27 0.21 0.03 16 21 C -0.13 0.62 5.87 31.12 0.18 0.81 16 22 C 0.08 -0.33 5.28 31.12 0.16 -0.17 16 23 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 24 O -0.57 0.37 11.58 -148.98 -1.73 -1.35 16 25 C -0.15 0.57 6.92 31.12 0.22 0.79 16 26 C -0.03 -0.25 8.90 22.52 0.20 -0.05 16 27 H 0.41 -3.44 8.74 -74.05 -0.65 -4.09 16 28 H 0.10 -0.19 7.96 -2.39 -0.02 -0.21 16 29 H -0.31 -3.27 7.11 99.48 0.71 -2.56 16 30 H -0.26 -1.32 5.39 99.48 0.54 -0.78 16 31 H 0.18 -1.12 8.06 -2.91 -0.02 -1.15 16 32 H 0.17 -1.39 6.40 -2.91 -0.02 -1.41 16 33 H 0.41 -1.15 5.92 -92.71 -0.55 -1.70 16 34 H 0.05 0.36 7.80 -2.39 -0.02 0.34 16 35 H 0.08 0.59 6.06 -2.39 -0.01 0.58 16 36 H 0.15 -1.18 6.42 -2.91 -0.02 -1.20 16 37 H 0.14 -0.83 8.06 -2.91 -0.02 -0.86 16 38 H 0.13 -0.37 8.06 -2.91 -0.02 -0.39 16 39 H 0.13 -0.11 8.06 -2.91 -0.02 -0.13 16 40 H 0.12 0.10 8.06 -2.91 -0.02 0.08 16 41 H 0.08 -0.29 7.35 -2.39 -0.02 -0.31 16 42 H 0.12 -1.03 6.80 -2.39 -0.02 -1.05 16 43 H 0.40 -3.03 9.12 -74.06 -0.68 -3.70 16 44 H 0.10 -0.53 8.10 -2.39 -0.02 -0.55 16 45 H 0.08 -0.22 8.10 -2.38 -0.02 -0.24 16 46 H 0.14 1.87 6.71 -2.91 -0.02 1.85 16 Total: 0.00 -25.65 378.16 -0.72 -26.37 By element: Atomic # 1 Polarization: -17.17 SS G_CDS: -0.95 Total: -18.12 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 3.38 Total: 8.95 kcal Atomic # 7 Polarization: -2.18 SS G_CDS: -2.34 Total: -4.52 kcal Atomic # 8 Polarization: -11.92 SS G_CDS: -3.50 Total: -15.42 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 0.58 Total: -0.16 kcal Atomic # 14 Polarization: 0.79 SS G_CDS: 2.11 Total: 2.90 kcal Total: -25.65 -0.72 -26.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.707 kcal (2) G-P(sol) polarization free energy of solvation -25.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds