Wall clock time and date at job start Sat Mar 6 2021 23:24:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34661 * 124.85011 * 2 1 4 4 C 1.36770 * 108.39435 * 180.02562 * 3 2 1 5 5 C 1.47264 * 126.93961 * 180.02562 * 4 3 2 6 6 O 1.21629 * 120.00236 * 180.02562 * 5 4 3 7 7 N 1.34778 * 119.99956 * 0.02562 * 5 4 3 8 8 C 1.46501 * 119.99942 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47139 * 184.77895 * 8 7 5 10 10 C 1.50707 * 112.84729 * 294.75602 * 9 8 7 11 11 C 1.38229 * 119.99952 * 283.14934 * 10 9 8 12 12 C 1.38243 * 119.99744 * 179.97438 * 11 10 9 13 13 C 1.38229 * 119.99955 * 0.09090 * 12 11 10 14 14 C 1.38230 * 120.00185 * 359.84670 * 13 12 11 15 15 C 1.38234 * 120.00007 * 0.12934 * 14 13 12 16 16 C 1.53788 * 113.61629 * 163.56507 * 9 8 7 17 17 C 1.53779 * 87.07752 * 270.79434 * 16 9 8 18 18 H 1.09004 * 113.61600 * 220.01494 * 17 16 9 19 19 O 1.42902 * 113.61211 * 89.20067 * 17 16 9 20 20 C 1.53779 * 113.69716 * 66.02474 * 9 8 7 21 21 C 1.46677 * 106.11777 * 0.25864 * 4 3 2 22 22 C 1.34495 * 106.33184 * 359.57123 * 21 4 3 23 23 C 1.50696 * 125.56972 * 180.14568 * 22 21 4 24 24 O 1.42902 * 109.47002 * 150.33501 * 23 22 21 25 25 Si 1.86302 * 109.47561 * 30.33617 * 23 22 21 26 26 H 1.08998 * 109.47049 * 89.97208 * 1 2 3 27 27 H 1.08998 * 109.46896 * 209.97893 * 1 2 3 28 28 H 1.09003 * 109.46769 * 329.97604 * 1 2 3 29 29 H 1.08001 * 125.79972 * 0.02562 * 3 2 1 30 30 H 0.97004 * 120.00153 * 0.02562 * 7 5 4 31 31 H 1.08995 * 109.47652 * 64.77099 * 8 7 5 32 32 H 1.09005 * 109.46761 * 304.77237 * 8 7 5 33 33 H 1.08001 * 120.00490 * 359.70230 * 11 10 9 34 34 H 1.07995 * 119.99674 * 179.97438 * 12 11 10 35 35 H 1.08006 * 119.99702 * 179.97438 * 13 12 11 36 36 H 1.08001 * 120.00546 * 180.10643 * 14 13 12 37 37 H 1.08007 * 120.00378 * 179.97438 * 15 14 13 38 38 H 1.09004 * 113.61234 * 25.34472 * 16 9 8 39 39 H 1.08997 * 113.61152 * 156.16258 * 16 9 8 40 40 H 0.96700 * 113.99672 * 179.97438 * 19 17 16 41 41 H 1.08997 * 113.61838 * 203.67700 * 20 9 8 42 42 H 1.09001 * 113.61020 * 334.58436 * 20 9 8 43 43 H 1.08002 * 126.83685 * 179.73980 * 21 4 3 44 44 H 1.09007 * 109.46914 * 270.33376 * 23 22 21 45 45 H 0.96701 * 113.99924 * 299.99808 * 24 23 22 46 46 H 1.48495 * 109.99928 * 180.02562 * 25 23 22 47 47 H 1.48503 * 109.99757 * 301.31857 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0006 5 6 4.7284 1.5958 -0.0003 6 8 5.8447 1.1129 -0.0013 7 7 4.5733 2.9346 0.0012 8 6 5.7494 3.8082 0.0010 9 6 5.3018 5.2661 0.1230 10 6 4.5114 5.7374 -1.0705 11 6 5.1613 6.0539 -2.2487 12 6 4.4362 6.4857 -3.3436 13 6 3.0615 6.6028 -3.2596 14 6 2.4114 6.2852 -2.0817 15 6 3.1364 5.8529 -0.9870 16 6 6.4323 6.2256 0.5310 17 6 6.0480 5.9320 1.9908 18 1 6.0787 6.8103 2.6356 19 8 6.7345 4.8097 2.5488 20 6 4.6397 5.5986 1.4706 21 6 3.5375 -0.7491 -0.0073 22 6 2.2447 -1.1197 -0.0005 23 6 1.7398 -2.5395 -0.0007 24 8 0.4811 -2.5976 0.6734 25 14 2.9652 -3.6346 0.8769 26 1 -0.3633 0.0005 -1.0277 27 1 -0.3633 -0.8902 0.5135 28 1 -0.3633 0.8898 0.5142 29 1 1.8766 2.1241 0.0004 30 1 3.6831 3.3198 0.0024 31 1 6.3014 3.6742 -0.9293 32 1 6.3913 3.5534 0.8443 33 1 6.2360 5.9680 -2.3125 34 1 4.9440 6.7333 -4.2640 35 1 2.4950 6.9406 -4.1149 36 1 1.3371 6.3750 -2.0166 37 1 2.6286 5.6051 -0.0666 38 1 7.4263 5.8690 0.2610 39 1 6.2574 7.2589 0.2314 40 1 6.4973 4.6203 3.4669 41 1 3.9742 6.4608 1.4292 42 1 4.1867 4.7359 1.9591 43 1 4.3981 -1.4016 -0.0134 44 1 1.6177 -2.8816 -1.0284 45 1 0.5147 -2.3068 1.5951 46 1 2.4791 -5.0377 0.8830 47 1 4.2870 -3.5584 0.2043 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_13287730.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:24:13 Heat of formation + Delta-G solvation = -2.561469 kcal Electronic energy + Delta-G solvation = -30330.139381 eV Core-core repulsion = 26253.511734 eV Total energy + Delta-G solvation = -4076.627648 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.44531 -41.81117 -39.71388 -39.29521 -37.88960 -36.31392 -34.76729 -33.75915 -31.93852 -31.81609 -31.46542 -28.77630 -27.39801 -27.00471 -26.17141 -24.71064 -23.35559 -23.12518 -22.38489 -20.98580 -20.49757 -19.93892 -18.90231 -18.61875 -17.78229 -17.40613 -16.89251 -16.79151 -16.68629 -16.37631 -15.84673 -15.81166 -15.62948 -15.48738 -15.39018 -15.24376 -14.87210 -14.54818 -14.34770 -14.30886 -14.02140 -13.87707 -13.60445 -13.49068 -13.35116 -13.14601 -13.07932 -12.99204 -12.72785 -12.27380 -12.17081 -11.93945 -11.93201 -11.72978 -11.20394 -10.78182 -10.75408 -10.62918 -9.87866 -9.80273 -9.64398 -9.48939 -9.16953 -4.99759 0.40107 0.45357 0.83630 1.07943 1.42902 1.66670 1.88685 2.06551 2.39830 2.79298 2.82646 3.02851 3.13661 3.37432 3.46292 3.56664 3.61715 3.75233 3.80891 3.81946 3.97423 4.05426 4.07991 4.19454 4.20153 4.29314 4.34949 4.38960 4.51531 4.55698 4.59528 4.61240 4.64141 4.70751 4.78621 4.90890 4.93349 4.99791 5.04284 5.07374 5.10459 5.15060 5.27864 5.54537 5.58897 5.61486 5.67041 5.75431 6.00286 6.05089 6.18392 6.30624 6.65543 6.79443 7.60034 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.424 5.424 3 C 0.049 3.951 4 C -0.223 4.223 5 C 0.590 3.410 6 O -0.542 6.542 7 N -0.725 5.725 8 C 0.146 3.854 9 C -0.051 4.051 10 C -0.067 4.067 11 C -0.111 4.111 12 C -0.115 4.115 13 C -0.123 4.123 14 C -0.117 4.117 15 C -0.121 4.121 16 C -0.115 4.115 17 C 0.080 3.920 18 H 0.071 0.929 19 O -0.545 6.545 20 C -0.163 4.163 21 C -0.136 4.136 22 C -0.021 4.021 23 C -0.042 4.042 24 O -0.542 6.542 25 Si 0.716 3.284 26 H 0.072 0.928 27 H 0.114 0.886 28 H 0.081 0.919 29 H 0.168 0.832 30 H 0.394 0.606 31 H 0.064 0.936 32 H 0.099 0.901 33 H 0.122 0.878 34 H 0.122 0.878 35 H 0.121 0.879 36 H 0.121 0.879 37 H 0.120 0.880 38 H 0.084 0.916 39 H 0.101 0.899 40 H 0.382 0.618 41 H 0.094 0.906 42 H 0.078 0.922 43 H 0.152 0.848 44 H 0.118 0.882 45 H 0.381 0.619 46 H -0.252 1.252 47 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.811 4.006 3.619 7.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.098 5.098 3 C -0.087 4.087 4 C -0.234 4.234 5 C 0.378 3.622 6 O -0.419 6.419 7 N -0.377 5.377 8 C 0.023 3.977 9 C -0.051 4.051 10 C -0.067 4.067 11 C -0.129 4.129 12 C -0.133 4.133 13 C -0.141 4.141 14 C -0.135 4.135 15 C -0.139 4.139 16 C -0.153 4.153 17 C 0.021 3.979 18 H 0.089 0.911 19 O -0.351 6.351 20 C -0.200 4.200 21 C -0.161 4.161 22 C -0.130 4.130 23 C -0.153 4.153 24 O -0.348 6.348 25 Si 0.615 3.385 26 H 0.091 0.909 27 H 0.132 0.868 28 H 0.099 0.901 29 H 0.185 0.815 30 H 0.228 0.772 31 H 0.082 0.918 32 H 0.117 0.883 33 H 0.140 0.860 34 H 0.140 0.860 35 H 0.139 0.861 36 H 0.139 0.861 37 H 0.138 0.862 38 H 0.102 0.898 39 H 0.119 0.881 40 H 0.230 0.770 41 H 0.112 0.888 42 H 0.097 0.903 43 H 0.169 0.831 44 H 0.135 0.865 45 H 0.229 0.771 46 H -0.177 1.177 47 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -4.744 2.695 2.373 5.950 hybrid contribution -1.136 0.879 -0.311 1.470 sum -5.881 3.573 2.063 7.184 Atomic orbital electron populations 1.22563 0.76339 1.05987 1.04231 1.43460 1.06944 1.04831 1.54581 1.21891 0.90170 0.91696 1.04991 1.20325 0.91532 0.93922 1.17597 1.17351 0.88043 0.81172 0.75636 1.90791 1.25804 1.75169 1.50181 1.45698 1.09634 1.05695 1.76669 1.21186 0.87763 0.85319 1.03479 1.20941 0.96805 0.95103 0.92273 1.19623 0.93558 0.99000 0.94490 1.21010 1.00112 0.99209 0.92565 1.21194 0.94322 0.99207 0.98578 1.21193 0.94743 1.00191 0.98008 1.21147 0.99875 0.99244 0.93256 1.20988 0.93361 1.00879 0.98662 1.23103 0.98957 0.99544 0.93707 1.22621 0.91575 0.88915 0.94796 0.91073 1.86487 1.67269 1.49133 1.32228 1.23778 0.97843 1.02594 0.95805 1.21728 0.94934 0.93289 1.06106 1.20731 0.90569 0.89055 1.12626 1.24839 0.93339 0.94952 1.02122 1.86447 1.30091 1.89090 1.29172 0.94082 0.76867 0.77563 0.89968 0.90917 0.86783 0.90056 0.81511 0.77244 0.91760 0.88327 0.86026 0.85986 0.86122 0.86089 0.86217 0.89757 0.88091 0.76966 0.88753 0.90316 0.83084 0.86525 0.77131 1.17684 1.17473 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.15 10.71 59.85 0.64 0.49 16 2 N -0.42 0.14 3.09 -119.90 -0.37 -0.23 16 3 C 0.05 0.00 10.83 -16.84 -0.18 -0.18 16 4 C -0.22 -0.69 6.29 -103.35 -0.65 -1.34 16 5 C 0.59 2.85 7.81 -12.59 -0.10 2.76 16 6 O -0.54 -4.92 16.97 5.25 0.09 -4.83 16 7 N -0.73 -1.19 5.19 -61.43 -0.32 -1.50 16 8 C 0.15 0.28 4.89 -4.04 -0.02 0.26 16 9 C -0.05 0.03 0.62 -154.84 -0.10 -0.06 16 10 C -0.07 0.01 4.52 -104.62 -0.47 -0.46 16 11 C -0.11 -0.06 9.39 -39.58 -0.37 -0.44 16 12 C -0.11 -0.05 10.05 -39.58 -0.40 -0.45 16 13 C -0.12 -0.01 10.05 -39.59 -0.40 -0.41 16 14 C -0.12 0.06 10.05 -39.59 -0.40 -0.34 16 15 C -0.12 0.10 8.53 -39.58 -0.34 -0.23 16 16 C -0.12 0.10 6.72 -25.92 -0.17 -0.07 16 17 C 0.08 -0.11 5.27 -25.92 -0.14 -0.25 16 18 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 19 O -0.55 0.04 11.52 -35.23 -0.41 -0.37 16 20 C -0.16 0.33 5.94 -25.92 -0.15 0.18 16 21 C -0.14 -0.42 9.50 -37.50 -0.36 -0.78 16 22 C -0.02 -0.02 6.13 -81.87 -0.50 -0.52 16 23 C -0.04 0.03 2.98 36.00 0.11 0.13 16 24 O -0.54 0.94 9.95 -35.23 -0.35 0.58 16 25 Si 0.72 -0.59 31.31 -169.99 -5.32 -5.91 16 26 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 27 H 0.11 -0.40 4.93 -51.93 -0.26 -0.66 16 28 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 29 H 0.17 -0.52 7.45 -52.49 -0.39 -0.91 16 30 H 0.39 -0.27 6.71 -40.82 -0.27 -0.54 16 31 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 32 H 0.10 0.36 5.95 -51.93 -0.31 0.05 16 33 H 0.12 -0.02 8.03 -52.49 -0.42 -0.44 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 35 H 0.12 -0.15 8.06 -52.48 -0.42 -0.58 16 36 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 37 H 0.12 -0.33 7.01 -52.48 -0.37 -0.69 16 38 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 39 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 40 H 0.38 -1.39 9.12 45.56 0.42 -0.97 16 41 H 0.09 -0.26 7.43 -51.93 -0.39 -0.65 16 42 H 0.08 -0.15 7.95 -51.93 -0.41 -0.57 16 43 H 0.15 0.55 6.68 -52.49 -0.35 0.19 16 44 H 0.12 -0.01 7.96 -51.92 -0.41 -0.42 16 45 H 0.38 -2.00 8.38 45.56 0.38 -1.61 16 46 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 47 H -0.25 -0.54 6.77 56.52 0.38 -0.16 16 LS Contribution 382.72 15.07 5.77 5.77 Total: 0.00 -9.96 382.72 -10.71 -20.67 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -5.80 Total: -12.46 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -4.00 Total: -1.72 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.69 Total: -1.73 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.67 Total: -4.61 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.32 Total: -5.91 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -9.96 -10.71 -20.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_13287730.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.104 kcal (2) G-P(sol) polarization free energy of solvation -9.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.665 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds