Wall clock time and date at job start Sat Mar 6 2021 23:24:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38979 * 119.95295 * 2 1 4 4 O 1.35709 * 119.91286 * 359.69666 * 3 2 1 5 5 C 1.39023 * 120.17051 * 179.97438 * 3 2 1 6 6 C 1.50701 * 119.95103 * 179.97438 * 5 3 2 7 7 O 1.42897 * 109.47653 * 285.00011 * 6 5 3 8 8 Si 1.86301 * 109.46991 * 164.99815 * 6 5 3 9 9 C 1.37676 * 120.09322 * 359.97438 * 5 3 2 10 10 C 1.39755 * 119.90741 * 359.97438 * 9 5 3 11 11 C 1.47602 * 120.08624 * 179.97438 * 10 9 5 12 12 O 1.21591 * 120.00120 * 0.02562 * 11 10 9 13 13 N 1.34774 * 120.00358 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00291 * 179.97438 * 13 11 10 15 15 C 1.52995 * 109.47143 * 175.22374 * 14 13 11 16 16 C 1.50708 * 112.85062 * 292.17435 * 15 14 13 17 17 C 1.38231 * 120.00404 * 113.50934 * 16 15 14 18 18 C 1.38229 * 120.00040 * 179.81095 * 17 16 15 19 19 C 1.38241 * 120.00172 * 0.42181 * 18 17 16 20 20 C 1.38233 * 119.99493 * 359.81334 * 19 18 17 21 21 C 1.38230 * 120.00378 * 359.97438 * 20 19 18 22 22 C 1.53776 * 113.61678 * 160.86729 * 15 14 13 23 23 C 1.53784 * 87.08065 * 270.88242 * 22 15 14 24 24 H 1.08999 * 113.61176 * 220.01876 * 23 22 15 25 25 O 1.42900 * 113.61426 * 89.11524 * 23 22 15 26 26 C 1.53774 * 113.61649 * 63.36547 * 15 14 13 27 27 C 1.37717 * 119.95613 * 179.97438 * 2 1 3 28 28 H 1.08997 * 109.47155 * 90.00375 * 1 2 3 29 29 H 1.08993 * 109.46955 * 210.00414 * 1 2 3 30 30 H 1.08997 * 109.47178 * 330.00322 * 1 2 3 31 31 H 0.96697 * 113.99918 * 90.00643 * 4 3 2 32 32 H 1.09001 * 109.47281 * 45.00124 * 6 5 3 33 33 H 0.96707 * 113.99475 * 300.00131 * 7 6 5 34 34 H 1.48498 * 110.00130 * 180.02562 * 8 6 5 35 35 H 1.48504 * 110.00236 * 301.31851 * 8 6 5 36 36 H 1.07992 * 120.04474 * 179.97438 * 9 5 3 37 37 H 0.96998 * 119.99860 * 0.02562 * 13 11 10 38 38 H 1.08999 * 109.47384 * 295.22241 * 14 13 11 39 39 H 1.09001 * 109.46651 * 55.22663 * 14 13 11 40 40 H 1.08004 * 119.99866 * 0.02562 * 17 16 15 41 41 H 1.08001 * 120.00074 * 180.21660 * 18 17 16 42 42 H 1.07998 * 119.99726 * 179.79301 * 19 18 17 43 43 H 1.08006 * 119.99835 * 179.97438 * 20 19 18 44 44 H 1.08002 * 119.99970 * 179.97438 * 21 20 19 45 45 H 1.08995 * 113.61402 * 25.42821 * 22 15 14 46 46 H 1.08997 * 113.62037 * 156.33328 * 22 15 14 47 47 H 0.96698 * 114.00035 * 82.50061 * 25 23 22 48 48 H 1.09001 * 113.62067 * 203.66629 * 26 15 14 49 49 H 1.09003 * 113.61629 * 334.56879 * 26 15 14 50 50 H 1.07996 * 120.04890 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2042 0.0000 4 8 1.5197 2.3778 -0.0062 5 6 3.5912 1.2094 0.0005 6 6 4.3386 2.5180 0.0000 7 8 4.2726 3.1038 -1.3018 8 14 6.1196 2.2161 0.4555 9 6 4.2860 0.0209 0.0016 10 6 3.5918 -1.1921 0.0027 11 6 4.3328 -2.4686 0.0033 12 8 5.5487 -2.4659 0.0033 13 7 3.6617 -3.6374 0.0038 14 6 4.3971 -4.9045 0.0038 15 6 3.4100 -6.0671 0.1245 16 6 2.7268 -6.1178 1.4669 17 6 1.3673 -5.8861 1.5598 18 6 0.7400 -5.9365 2.7906 19 6 1.4739 -6.2099 3.9297 20 6 2.8344 -6.4368 3.8374 21 6 3.4609 -6.3908 2.6061 22 6 3.9915 -7.4181 -0.3242 23 6 3.4946 -7.0733 -1.7381 24 1 3.0690 -7.9237 -2.2708 25 8 4.4470 -6.3480 -2.5185 26 6 2.4409 -6.1785 -1.0642 27 6 2.1947 -1.1932 0.0005 28 1 -0.3633 -0.0001 -1.0276 29 1 -0.3633 -0.8899 0.5139 30 1 -0.3633 0.8900 0.5138 31 1 1.3183 2.7204 0.8753 32 1 3.8875 3.1945 0.7260 33 1 4.6567 2.5555 -1.9997 34 1 6.8675 3.4990 0.4591 35 1 6.2004 1.5780 1.7940 36 1 5.3659 0.0259 0.0016 37 1 2.6917 -3.6397 0.0034 38 1 4.9579 -4.9991 -0.9261 39 1 5.0867 -4.9242 0.8477 40 1 0.7944 -5.6691 0.6703 41 1 -0.3228 -5.7589 2.8627 42 1 0.9844 -6.2460 4.8917 43 1 3.4079 -6.6501 4.7274 44 1 4.5239 -6.5677 2.5341 45 1 5.0771 -7.4743 -0.2445 46 1 3.4887 -8.2784 0.1176 47 1 5.1123 -6.9054 -2.9447 48 1 1.5141 -6.6998 -0.8248 49 1 2.2747 -5.2338 -1.5821 50 1 1.6548 -2.1285 0.0005 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:24:16 Heat of formation + Delta-G solvation = -73.669302 kcal Electronic energy + Delta-G solvation = -34226.297546 eV Core-core repulsion = 29765.104009 eV Total energy + Delta-G solvation = -4461.193536 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.04956 -41.47804 -40.05580 -39.37792 -37.79476 -37.44811 -36.45176 -35.04037 -33.97921 -32.12402 -31.87851 -31.72617 -28.63419 -28.07079 -27.11662 -26.77615 -25.14301 -24.04407 -23.28175 -22.45307 -22.04366 -21.30855 -20.06645 -19.56888 -18.75509 -18.63588 -18.01246 -17.79810 -17.26377 -16.83478 -16.58956 -16.34709 -16.11634 -15.93705 -15.84458 -15.64639 -15.46863 -15.33191 -14.88652 -14.66635 -14.51811 -14.41363 -14.24640 -14.09734 -14.05582 -13.91604 -13.64836 -13.33821 -13.26769 -13.15777 -13.02400 -12.84736 -12.71292 -12.33015 -12.27079 -11.98052 -11.96337 -11.71446 -11.60750 -11.38240 -10.90329 -10.80917 -10.36831 -10.03427 -9.94588 -9.89032 -9.68032 -9.61843 -4.94670 -0.34185 0.08600 0.36090 0.42346 1.30424 1.68794 1.76188 2.00574 2.11022 2.65676 2.75771 2.95776 3.05594 3.24104 3.38120 3.40695 3.55827 3.56650 3.63156 3.66954 3.73374 3.89720 3.97596 4.01962 4.04741 4.16214 4.18967 4.26493 4.30358 4.44248 4.50133 4.53930 4.54180 4.58468 4.61756 4.62573 4.66491 4.68626 4.82401 4.92880 4.94096 5.00034 5.04532 5.07629 5.08030 5.11157 5.15718 5.28048 5.41840 5.51221 5.54891 5.56963 5.60454 6.01601 6.50521 6.55845 6.58012 6.62626 7.25231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.117 4.117 3 C 0.158 3.842 4 O -0.482 6.482 5 C -0.152 4.152 6 C -0.054 4.054 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.045 4.045 10 C -0.135 4.135 11 C 0.561 3.439 12 O -0.533 6.533 13 N -0.718 5.718 14 C 0.144 3.856 15 C -0.052 4.052 16 C -0.068 4.068 17 C -0.121 4.121 18 C -0.116 4.116 19 C -0.123 4.123 20 C -0.115 4.115 21 C -0.111 4.111 22 C -0.151 4.151 23 C 0.081 3.919 24 H 0.073 0.927 25 O -0.546 6.546 26 C -0.129 4.129 27 C -0.066 4.066 28 H 0.076 0.924 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.391 0.609 32 H 0.111 0.889 33 H 0.378 0.622 34 H -0.250 1.250 35 H -0.255 1.255 36 H 0.145 0.855 37 H 0.398 0.602 38 H 0.096 0.904 39 H 0.071 0.929 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.120 0.880 45 H 0.081 0.919 46 H 0.096 0.904 47 H 0.383 0.617 48 H 0.102 0.898 49 H 0.081 0.919 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.576 -5.358 0.194 6.444 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.118 4.118 3 C 0.112 3.888 4 O -0.293 6.293 5 C -0.152 4.152 6 C -0.165 4.165 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.064 4.064 10 C -0.138 4.138 11 C 0.348 3.652 12 O -0.410 6.410 13 N -0.369 5.369 14 C 0.021 3.979 15 C -0.052 4.052 16 C -0.068 4.068 17 C -0.139 4.139 18 C -0.134 4.134 19 C -0.141 4.141 20 C -0.133 4.133 21 C -0.129 4.129 22 C -0.189 4.189 23 C 0.021 3.979 24 H 0.090 0.910 25 O -0.352 6.352 26 C -0.166 4.166 27 C -0.085 4.085 28 H 0.095 0.905 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.249 0.751 32 H 0.129 0.871 33 H 0.225 0.775 34 H -0.174 1.174 35 H -0.179 1.179 36 H 0.162 0.838 37 H 0.233 0.767 38 H 0.114 0.886 39 H 0.089 0.911 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.138 0.862 45 H 0.099 0.901 46 H 0.114 0.886 47 H 0.232 0.768 48 H 0.120 0.880 49 H 0.100 0.900 50 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.648 -4.269 0.705 5.073 hybrid contribution -0.920 -0.445 0.714 1.247 sum -3.568 -4.715 1.420 6.081 Atomic orbital electron populations 1.20690 0.89731 1.03072 1.03127 1.20202 0.97276 0.92094 1.02197 1.18304 0.88816 0.85243 0.96409 1.84826 1.75619 1.35644 1.33203 1.20676 0.93921 0.96027 1.04626 1.24854 1.09324 0.92834 0.89526 1.86551 1.84551 1.46650 1.15891 0.94617 0.77422 0.83748 0.86455 1.20931 0.99970 0.90135 0.95350 1.19838 0.93445 0.93519 1.07032 1.18061 0.87218 0.83450 0.76494 1.90806 1.13180 1.87502 1.49540 1.45741 1.10312 1.05529 1.75361 1.21262 0.92918 0.79870 1.03820 1.20936 0.96569 0.96201 0.91531 1.19586 0.93638 0.99659 0.93938 1.21050 0.94035 1.01053 0.97801 1.21165 0.99952 0.99716 0.92612 1.21207 0.94356 0.99814 0.98679 1.21189 0.94937 0.99585 0.97637 1.20980 0.99874 0.99919 0.92084 1.23673 1.02138 0.96004 0.97067 1.22626 0.90568 0.94374 0.90313 0.90955 1.86485 1.44047 1.37450 1.67259 1.23250 0.96891 1.01427 0.95005 1.21075 0.92643 0.97718 0.97038 0.90506 0.91251 0.91050 0.75110 0.87124 0.77494 1.17417 1.17910 0.83775 0.76693 0.88576 0.91087 0.85961 0.85999 0.86088 0.86007 0.86159 0.90079 0.88563 0.76841 0.87992 0.89998 0.85205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.18 9.78 36.01 0.35 0.53 16 2 C -0.12 -0.02 5.89 -104.54 -0.62 -0.63 16 3 C 0.16 0.18 6.66 -39.02 -0.26 -0.08 16 4 O -0.48 -0.33 11.85 -18.83 -0.22 -0.56 16 5 C -0.15 -0.20 5.27 -104.54 -0.55 -0.75 16 6 C -0.05 -0.06 2.37 36.01 0.09 0.03 16 7 O -0.53 -1.00 12.88 -35.23 -0.45 -1.46 16 8 Si 0.68 0.52 29.91 -169.99 -5.09 -4.56 16 9 C -0.05 -0.08 8.20 -39.22 -0.32 -0.40 16 10 C -0.14 -0.23 5.87 -104.96 -0.62 -0.85 16 11 C 0.56 1.73 7.76 -12.44 -0.10 1.63 16 12 O -0.53 -3.39 16.34 5.29 0.09 -3.30 16 13 N -0.72 -0.42 5.12 -61.33 -0.31 -0.74 16 14 C 0.14 0.08 4.83 -4.04 -0.02 0.06 16 15 C -0.05 0.08 0.63 -154.85 -0.10 -0.02 16 16 C -0.07 0.05 4.75 -104.62 -0.50 -0.45 16 17 C -0.12 0.15 9.05 -39.59 -0.36 -0.21 16 18 C -0.12 0.09 10.05 -39.58 -0.40 -0.31 16 19 C -0.12 0.02 10.05 -39.58 -0.40 -0.37 16 20 C -0.12 -0.01 10.05 -39.59 -0.40 -0.41 16 21 C -0.11 -0.01 9.30 -39.58 -0.37 -0.38 16 22 C -0.15 0.35 6.94 -25.92 -0.18 0.17 16 23 C 0.08 -0.18 5.28 -25.92 -0.14 -0.32 16 24 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 25 O -0.55 0.64 11.52 -35.23 -0.41 0.23 16 26 C -0.13 0.29 5.89 -25.92 -0.15 0.14 16 27 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 28 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 -0.20 8.08 -51.93 -0.42 -0.62 16 30 H 0.07 -0.14 7.53 -51.93 -0.39 -0.53 16 31 H 0.39 -1.39 9.06 45.56 0.41 -0.98 16 32 H 0.11 0.08 7.83 -51.93 -0.41 -0.32 16 33 H 0.38 -0.64 8.70 45.56 0.40 -0.25 16 34 H -0.25 -0.86 7.11 56.52 0.40 -0.45 16 35 H -0.25 -0.85 7.11 56.52 0.40 -0.45 16 36 H 0.15 0.19 4.70 -52.49 -0.25 -0.06 16 37 H 0.40 -0.55 6.00 -40.82 -0.25 -0.79 16 38 H 0.10 0.17 5.97 -51.93 -0.31 -0.14 16 39 H 0.07 0.12 7.91 -51.93 -0.41 -0.29 16 40 H 0.12 -0.37 6.44 -52.48 -0.34 -0.71 16 41 H 0.12 -0.28 8.06 -52.49 -0.42 -0.71 16 42 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 44 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 45 H 0.08 -0.18 8.10 -51.93 -0.42 -0.60 16 46 H 0.10 -0.24 8.10 -51.93 -0.42 -0.66 16 47 H 0.38 -1.81 9.12 45.56 0.42 -1.40 16 48 H 0.10 -0.34 6.83 -51.93 -0.35 -0.69 16 49 H 0.08 -0.13 7.61 -51.93 -0.40 -0.53 16 50 H 0.13 -0.33 6.39 -52.49 -0.34 -0.67 16 LS Contribution 406.52 15.07 6.13 6.13 Total: 0.00 -10.07 406.52 -10.86 -20.93 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -5.20 Total: -13.71 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -5.39 Total: -2.97 kcal Atomic # 7 Polarization: -0.42 SS G_CDS: -0.31 Total: -0.74 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -1.00 Total: -5.08 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: -5.09 Total: -4.56 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.07 -10.86 -20.93 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.736 kcal (2) G-P(sol) polarization free energy of solvation -10.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.859 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.933 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds