Wall clock time and date at job start Sat Mar 6 2021 23:24:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.36414 * 125.80283 * 2 1 4 4 C 1.47386 * 127.19206 * 0.02562 * 3 2 1 5 5 O 1.21610 * 119.99814 * 359.97438 * 4 3 2 6 6 N 1.34775 * 120.00149 * 179.97438 * 4 3 2 7 7 C 1.46503 * 119.99955 * 179.97438 * 6 4 3 8 8 C 1.52996 * 109.46989 * 175.22101 * 7 6 4 9 9 C 1.50699 * 112.84809 * 292.22692 * 8 7 6 10 10 C 1.38234 * 120.00280 * 113.51546 * 9 8 7 11 11 C 1.38239 * 120.00126 * 179.76058 * 10 9 8 12 12 C 1.38235 * 120.00032 * 0.51685 * 11 10 9 13 13 C 1.38244 * 119.99676 * 359.73817 * 12 11 10 14 14 C 1.38235 * 119.99969 * 0.02562 * 13 12 11 15 15 C 1.53779 * 113.61281 * 160.92145 * 8 7 6 16 16 C 1.53780 * 87.08200 * 270.87845 * 15 8 7 17 17 H 1.08991 * 113.61669 * 220.01672 * 16 15 8 18 18 O 1.42903 * 113.68539 * 89.12607 * 16 15 8 19 19 C 1.53782 * 113.61639 * 63.42054 * 8 7 6 20 20 C 1.47024 * 105.61943 * 179.97438 * 3 2 1 21 21 C 1.34172 * 105.94925 * 0.02562 * 20 3 2 22 22 C 1.50708 * 125.43405 * 179.97438 * 21 20 3 23 23 O 1.42897 * 109.46944 * 299.99779 * 22 21 20 24 24 Si 1.86302 * 109.47074 * 179.97438 * 22 21 20 25 25 O 1.33658 * 125.80356 * 180.21851 * 2 1 3 26 26 H 1.09006 * 109.46949 * 90.00237 * 1 2 3 27 27 H 1.09000 * 109.47123 * 210.00308 * 1 2 3 28 28 H 1.09002 * 109.47136 * 330.00344 * 1 2 3 29 29 H 0.96998 * 120.00094 * 0.02562 * 6 4 3 30 30 H 1.09002 * 109.46947 * 295.22033 * 7 6 4 31 31 H 1.08997 * 109.46731 * 55.21711 * 7 6 4 32 32 H 1.08000 * 119.99860 * 0.02562 * 10 9 8 33 33 H 1.07997 * 119.99943 * 180.22518 * 11 10 9 34 34 H 1.07997 * 120.00013 * 179.72204 * 12 11 10 35 35 H 1.07994 * 119.99551 * 179.97438 * 13 12 11 36 36 H 1.08005 * 119.99497 * 179.97438 * 14 13 12 37 37 H 1.09001 * 113.61737 * 25.43238 * 15 8 7 38 38 H 1.09000 * 113.61345 * 156.32996 * 15 8 7 39 39 H 0.96696 * 113.99940 * 82.47026 * 18 16 15 40 40 H 1.09004 * 113.61157 * 203.66060 * 19 8 7 41 41 H 1.08996 * 113.61316 * 334.48838 * 19 8 7 42 42 H 1.08000 * 127.02226 * 180.02562 * 20 3 2 43 43 H 1.09001 * 109.47100 * 60.00047 * 22 21 20 44 44 H 0.96697 * 114.00222 * 299.99500 * 23 22 21 45 45 H 1.48506 * 109.99950 * 58.68218 * 24 22 21 46 46 H 1.48494 * 110.00173 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5158 0.0005 5 8 0.6890 2.7892 0.0006 6 7 2.7930 3.5016 0.0010 7 6 2.3645 4.9025 0.0009 8 6 3.5899 5.8106 0.1217 9 6 4.2673 5.7039 1.4636 10 6 5.5389 5.1696 1.5554 11 6 6.1623 5.0762 2.7857 12 6 5.5099 5.5074 3.9256 13 6 4.2361 6.0369 3.8344 14 6 3.6147 6.1347 2.6035 15 6 3.3299 7.2587 -0.3259 16 6 3.7349 6.8111 -1.7403 17 1 4.3420 7.5431 -2.2728 18 8 2.6434 6.3214 -2.5219 19 6 4.5583 5.6999 -1.0678 20 6 3.6849 0.5991 0.0006 21 6 3.5859 -0.7390 0.0004 22 6 4.7459 -1.7010 0.0003 23 8 5.5426 -1.4863 -1.1664 24 14 4.1027 -3.4495 0.0007 25 8 2.2889 -1.0840 -0.0041 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5139 28 1 -0.3633 0.8900 0.5138 29 1 3.7381 3.2835 0.0006 30 1 1.8398 5.1220 -0.9290 31 1 1.6973 5.0784 0.8447 32 1 6.0471 4.8290 0.6653 33 1 7.1572 4.6621 2.8569 34 1 5.9951 5.4303 4.8873 35 1 3.7263 6.3733 4.7250 36 1 2.6194 6.5480 2.5324 37 1 2.2854 7.5598 -0.2454 38 1 4.0152 7.9820 0.1162 39 1 2.1218 7.0156 -2.9475 40 1 5.5794 5.9972 -0.8286 41 1 4.5063 4.7421 -1.5854 42 1 4.5928 1.1840 0.0012 43 1 5.3536 -1.5376 0.8903 44 1 5.0655 -1.6147 -1.9976 45 1 3.2464 -3.6759 -1.1913 46 1 5.2369 -4.4079 0.0012 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_13308374.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:24:28 Heat of formation + Delta-G solvation = -42.703316 kcal Electronic energy + Delta-G solvation = -30613.185622 eV Core-core repulsion = 26437.098632 eV Total energy + Delta-G solvation = -4176.086991 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.150 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.66524 -41.89424 -39.97831 -39.32571 -38.17730 -36.40797 -34.93475 -33.97497 -33.04520 -31.94569 -31.75945 -29.63714 -28.49463 -27.07231 -25.75992 -24.83570 -23.77251 -23.23564 -22.44422 -21.88968 -20.79770 -19.78235 -18.92361 -18.69021 -17.91547 -17.74682 -17.63459 -16.84330 -16.66862 -16.51845 -16.01657 -15.89839 -15.84158 -15.63726 -15.44115 -15.25640 -14.62141 -14.45723 -14.23954 -14.12625 -14.03830 -14.00589 -13.88053 -13.78894 -13.54761 -13.21508 -13.09771 -12.93705 -12.79919 -12.75275 -12.28628 -12.07553 -11.93412 -11.66956 -11.34492 -10.99333 -10.80984 -10.76740 -10.65962 -9.89986 -9.83346 -9.62951 -9.47164 -4.99194 0.39312 0.41330 0.47442 0.90221 1.14236 1.46627 1.71870 1.91583 2.27985 2.50166 2.80579 2.99194 3.10870 3.28882 3.39532 3.47612 3.61269 3.71405 3.78819 3.84754 3.98809 4.07109 4.09479 4.20437 4.20849 4.30191 4.32005 4.48493 4.54395 4.58267 4.61156 4.63217 4.66435 4.70650 4.72802 4.85562 4.87123 4.98442 4.99770 5.09419 5.11887 5.17703 5.19285 5.28908 5.54348 5.56721 5.61676 5.65869 5.96408 6.06641 6.22151 6.60316 6.63935 7.38075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.093 3.907 3 C -0.250 4.250 4 C 0.592 3.408 5 O -0.541 6.541 6 N -0.716 5.716 7 C 0.146 3.854 8 C -0.051 4.051 9 C -0.068 4.068 10 C -0.120 4.120 11 C -0.116 4.116 12 C -0.122 4.122 13 C -0.116 4.116 14 C -0.111 4.111 15 C -0.150 4.150 16 C 0.080 3.920 17 H 0.072 0.928 18 O -0.546 6.546 19 C -0.128 4.128 20 C -0.147 4.147 21 C -0.056 4.056 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.702 3.298 25 O -0.168 6.168 26 H 0.091 0.909 27 H 0.082 0.918 28 H 0.111 0.889 29 H 0.399 0.601 30 H 0.094 0.906 31 H 0.070 0.930 32 H 0.122 0.878 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.120 0.880 37 H 0.080 0.920 38 H 0.096 0.904 39 H 0.383 0.617 40 H 0.101 0.899 41 H 0.081 0.919 42 H 0.156 0.844 43 H 0.137 0.863 44 H 0.381 0.619 45 H -0.256 1.256 46 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.696 1.544 1.130 2.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.040 3.960 3 C -0.255 4.255 4 C 0.381 3.619 5 O -0.421 6.421 6 N -0.366 5.366 7 C 0.023 3.977 8 C -0.052 4.052 9 C -0.068 4.068 10 C -0.138 4.138 11 C -0.134 4.134 12 C -0.140 4.140 13 C -0.134 4.134 14 C -0.129 4.129 15 C -0.189 4.189 16 C 0.021 3.979 17 H 0.090 0.910 18 O -0.352 6.352 19 C -0.166 4.166 20 C -0.167 4.167 21 C -0.104 4.104 22 C -0.143 4.143 23 O -0.328 6.328 24 Si 0.601 3.399 25 O -0.065 6.065 26 H 0.109 0.891 27 H 0.101 0.899 28 H 0.129 0.871 29 H 0.233 0.767 30 H 0.112 0.888 31 H 0.088 0.912 32 H 0.140 0.860 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.138 0.862 37 H 0.099 0.901 38 H 0.114 0.886 39 H 0.231 0.769 40 H 0.120 0.880 41 H 0.100 0.900 42 H 0.174 0.826 43 H 0.154 0.846 44 H 0.229 0.771 45 H -0.180 1.180 46 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 1.422 0.244 1.343 1.971 hybrid contribution 0.711 1.258 -1.079 1.804 sum 2.134 1.502 0.264 2.623 Atomic orbital electron populations 1.20693 0.83346 1.05450 1.04695 1.22903 0.94052 0.82825 0.96219 1.21144 0.93167 0.93896 1.17249 1.17103 0.85363 0.83618 0.75849 1.90767 1.16497 1.84018 1.50772 1.45606 1.09655 1.05888 1.75483 1.21222 0.94276 0.78597 1.03599 1.20926 0.95764 0.96913 0.91550 1.19574 0.94427 0.98840 0.93923 1.21053 0.94798 1.00145 0.97831 1.21166 0.99946 0.99705 0.92609 1.21202 0.95246 0.98950 0.98645 1.21181 0.95335 0.99252 0.97608 1.20970 0.99819 1.00004 0.92092 1.23671 1.03214 0.94946 0.97036 1.22631 0.88792 0.96168 0.90307 0.90992 1.86492 1.44136 1.37396 1.67224 1.23245 0.98078 1.00179 0.95053 1.22557 0.96475 0.93480 1.04167 1.22523 0.82953 0.95512 1.09422 1.24331 0.90300 1.07661 0.92031 1.86654 1.38709 1.91732 1.15667 0.94367 0.81827 0.73716 0.90034 1.83667 1.16318 1.35051 1.71502 0.89084 0.89947 0.87069 0.76697 0.88817 0.91216 0.86004 0.86003 0.86080 0.86011 0.86204 0.90113 0.88562 0.76910 0.88022 0.90033 0.82636 0.84576 0.77095 1.17998 1.17281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.06 9.89 36.00 0.36 0.30 16 2 C 0.09 0.23 7.37 -34.97 -0.26 -0.03 16 3 C -0.25 -0.76 6.31 -103.27 -0.65 -1.41 16 4 C 0.59 2.48 7.81 -12.54 -0.10 2.38 16 5 O -0.54 -3.68 14.84 5.27 0.08 -3.60 16 6 N -0.72 -1.30 5.17 -61.40 -0.32 -1.62 16 7 C 0.15 0.21 4.83 -4.04 -0.02 0.19 16 8 C -0.05 0.03 0.63 -154.85 -0.10 -0.06 16 9 C -0.07 -0.01 4.75 -104.62 -0.50 -0.50 16 10 C -0.12 0.03 9.05 -39.58 -0.36 -0.33 16 11 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 12 C -0.12 -0.05 10.05 -39.58 -0.40 -0.44 16 13 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 14 C -0.11 -0.08 9.30 -39.58 -0.37 -0.44 16 15 C -0.15 0.25 6.94 -25.92 -0.18 0.07 16 16 C 0.08 -0.12 5.27 -25.92 -0.14 -0.26 16 17 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 18 O -0.55 0.21 11.53 -35.23 -0.41 -0.20 16 19 C -0.13 0.17 5.89 -25.92 -0.15 0.01 16 20 C -0.15 -0.20 10.46 -37.45 -0.39 -0.60 16 21 C -0.06 -0.06 6.20 -35.74 -0.22 -0.28 16 22 C -0.03 0.02 2.97 36.01 0.11 0.13 16 23 O -0.52 -0.18 12.86 -35.23 -0.45 -0.63 16 24 Si 0.70 -0.58 32.09 -169.99 -5.45 -6.03 16 25 O -0.17 -0.31 8.89 7.65 0.07 -0.25 16 26 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.11 0.21 6.48 -51.93 -0.34 -0.12 16 29 H 0.40 0.12 7.15 -40.82 -0.29 -0.18 16 30 H 0.09 0.26 5.97 -51.93 -0.31 -0.05 16 31 H 0.07 0.18 7.91 -51.93 -0.41 -0.23 16 32 H 0.12 -0.22 6.44 -52.49 -0.34 -0.56 16 33 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 34 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 35 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 36 H 0.12 -0.01 8.06 -52.48 -0.42 -0.43 16 37 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 38 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 39 H 0.38 -1.56 9.12 45.56 0.42 -1.14 16 40 H 0.10 -0.24 6.83 -51.93 -0.35 -0.59 16 41 H 0.08 -0.03 7.61 -51.93 -0.40 -0.42 16 42 H 0.16 -0.05 7.74 -52.49 -0.41 -0.46 16 43 H 0.14 -0.29 7.96 -51.93 -0.41 -0.70 16 44 H 0.38 -0.83 8.70 45.56 0.40 -0.44 16 45 H -0.26 -0.49 7.11 56.52 0.40 -0.08 16 46 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 LS Contribution 382.21 15.07 5.76 5.76 Total: 0.00 -8.19 382.21 -10.33 -18.52 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -5.44 Total: -9.80 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -4.16 Total: -2.15 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.32 Total: -1.62 kcal Atomic # 8 Polarization: -3.96 SS G_CDS: -0.71 Total: -4.67 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.45 Total: -6.03 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.19 -10.33 -18.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_13308374.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.185 kcal (2) G-P(sol) polarization free energy of solvation -8.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.519 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds