Wall clock time and date at job start Sat Mar 6 2021 23:24:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37786 * 119.85332 * 2 1 4 4 C 1.39706 * 119.90826 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.18896 * 179.97438 * 4 3 2 6 6 O 1.21589 * 120.00164 * 180.02562 * 5 4 3 7 7 N 1.34777 * 120.00398 * 0.02562 * 5 4 3 8 8 C 1.46500 * 120.00280 * 180.02562 * 7 5 4 9 9 C 1.53002 * 109.46805 * 176.19796 * 8 7 5 10 10 C 1.50699 * 112.85108 * 73.43436 * 9 8 7 11 11 C 1.38238 * 119.99438 * 246.01127 * 10 9 8 12 12 C 1.38244 * 119.99722 * 179.74306 * 11 10 9 13 13 C 1.38237 * 119.99756 * 0.54791 * 12 11 10 14 14 C 1.38236 * 120.00129 * 359.70503 * 13 12 11 15 15 C 1.38232 * 120.00635 * 66.28216 * 10 9 8 16 16 C 1.53782 * 113.61602 * 302.22975 * 9 8 7 17 17 C 1.53781 * 87.08201 * 270.88786 * 16 9 8 18 18 H 1.08995 * 113.61390 * 220.02010 * 17 16 9 19 19 O 1.42901 * 113.61553 * 89.11580 * 17 16 9 20 20 C 1.53785 * 87.08296 * 334.56591 * 17 16 9 21 21 C 1.40138 * 119.62176 * 0.02562 * 4 3 2 22 22 O 1.35642 * 120.15274 * 179.72350 * 21 4 3 23 23 C 1.38708 * 119.69349 * 0.02562 * 21 4 3 24 24 C 1.50702 * 119.95345 * 179.97438 * 23 21 4 25 25 O 1.42904 * 109.46928 * 284.99525 * 24 23 21 26 26 Si 1.86298 * 109.47070 * 165.00122 * 24 23 21 27 27 C 1.38051 * 120.08990 * 359.97438 * 23 21 4 28 28 H 1.08997 * 109.47043 * 89.99723 * 1 2 3 29 29 H 1.08996 * 109.46844 * 209.99993 * 1 2 3 30 30 H 1.08998 * 109.46795 * 330.00021 * 1 2 3 31 31 H 1.07997 * 120.04301 * 0.02562 * 3 2 1 32 32 H 0.97000 * 119.99558 * 0.02562 * 7 5 4 33 33 H 1.08997 * 109.46756 * 296.19268 * 8 7 5 34 34 H 1.08998 * 109.47405 * 56.19434 * 8 7 5 35 35 H 1.07995 * 120.00347 * 359.97438 * 11 10 9 36 36 H 1.07992 * 120.00004 * 180.27337 * 12 11 10 37 37 H 1.07998 * 119.99759 * 179.72582 * 13 12 11 38 38 H 1.07999 * 120.00002 * 179.97438 * 14 13 12 39 39 H 1.08005 * 119.99711 * 0.02562 * 15 10 9 40 40 H 1.09000 * 113.61079 * 25.43598 * 16 9 8 41 41 H 1.09003 * 113.61368 * 156.25399 * 16 9 8 42 42 H 0.96698 * 114.00137 * 180.02562 * 19 17 16 43 43 H 1.08998 * 113.61689 * 270.88728 * 20 17 16 44 44 H 1.08996 * 113.61489 * 139.98017 * 20 17 16 45 45 H 0.96700 * 114.00668 * 90.00202 * 22 21 4 46 46 H 1.08995 * 109.47249 * 45.00172 * 24 23 21 47 47 H 0.96696 * 114.00361 * 300.00041 * 25 24 23 48 48 H 1.48499 * 110.00332 * 180.02562 * 26 24 23 49 49 H 1.48502 * 109.99827 * 301.31814 * 26 24 23 50 50 H 1.08003 * 119.80933 * 179.97438 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5900 1.1964 0.0005 5 6 4.3306 2.4723 0.0000 6 8 5.5465 2.4695 0.0000 7 7 3.6596 3.6411 -0.0005 8 6 4.3950 4.9081 -0.0017 9 6 3.4062 6.0717 -0.0977 10 6 2.6508 6.3052 1.1852 11 6 1.2858 6.0917 1.2322 12 6 0.5937 6.3008 2.4105 13 6 1.2648 6.7342 3.5387 14 6 2.6289 6.9527 3.4902 15 6 3.3219 6.7382 2.3135 16 6 2.5041 6.0124 -1.3418 17 6 3.5958 6.8099 -2.0746 18 1 3.2027 7.5760 -2.7428 19 8 4.5873 5.9876 -2.6935 20 6 4.0156 7.3501 -0.6973 21 6 4.2838 -0.0212 0.0005 22 8 5.6402 -0.0325 -0.0046 23 6 3.5771 -1.2148 -0.0005 24 6 4.3173 -2.5275 -0.0011 25 8 4.8554 -2.7703 -1.3025 26 14 3.1442 -3.9020 0.4520 27 6 2.1966 -1.2017 -0.0011 28 1 -0.3633 0.0000 -1.0276 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8900 0.5138 31 1 1.6512 2.1293 0.0004 32 1 2.6896 3.6434 -0.0002 33 1 4.9701 4.9952 0.9202 34 1 5.0716 4.9348 -0.8558 35 1 0.7607 5.7581 0.3494 36 1 -0.4719 6.1298 2.4484 37 1 0.7234 6.9018 4.4580 38 1 3.1531 7.2917 4.3715 39 1 4.3876 6.9096 2.2755 40 1 2.3637 5.0043 -1.7316 41 1 1.5665 6.5565 -1.2275 42 1 5.2769 6.4835 -3.1557 43 1 3.4918 8.2609 -0.4074 44 1 5.0953 7.4217 -0.5670 45 1 6.0369 -0.0339 0.8773 46 1 5.1284 -2.4876 0.7259 47 1 4.1886 -2.8184 -2.0012 48 1 3.8621 -5.2020 0.4556 49 1 2.5534 -3.6450 1.7900 50 1 1.6509 -2.1338 -0.0023 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_13422088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:24:40 Heat of formation + Delta-G solvation = -71.371053 kcal Electronic energy + Delta-G solvation = -34389.319554 eV Core-core repulsion = 29928.225677 eV Total energy + Delta-G solvation = -4461.093877 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.03505 -41.43647 -39.70311 -39.31980 -37.95642 -37.52538 -36.37116 -34.89794 -33.06985 -32.83981 -31.97375 -31.79143 -28.66498 -27.61367 -27.08074 -26.75127 -25.26484 -24.13209 -23.27824 -22.44018 -21.97944 -21.22993 -20.06022 -19.44802 -18.70893 -18.29995 -17.90704 -17.77133 -17.32775 -16.74076 -16.53884 -16.39789 -16.09662 -15.84211 -15.79427 -15.68806 -15.34168 -15.31454 -14.89089 -14.67227 -14.61395 -14.48742 -14.24100 -14.10531 -14.04424 -13.71643 -13.52459 -13.38632 -13.25770 -13.12122 -13.01310 -12.80448 -12.55173 -12.31722 -12.11760 -12.00410 -11.95630 -11.70547 -11.61584 -11.34850 -10.80430 -10.72657 -10.32048 -10.12938 -9.90835 -9.83466 -9.67238 -9.48521 -5.07931 -0.28091 0.08906 0.36597 0.42705 1.25047 1.60853 1.87255 1.94658 2.17715 2.67064 2.76820 2.98751 3.22392 3.26788 3.40122 3.42225 3.55175 3.59341 3.66565 3.68354 3.71634 3.90089 4.02685 4.05149 4.08000 4.14954 4.16760 4.28134 4.33643 4.43552 4.51315 4.55367 4.56298 4.59355 4.60099 4.64697 4.69720 4.73218 4.84951 4.94990 4.95391 4.96504 4.98242 5.05397 5.09064 5.15846 5.22766 5.32845 5.49310 5.51908 5.57255 5.60410 5.62034 6.02070 6.58076 6.61919 6.63991 6.81200 7.36365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.068 4.068 4 C -0.161 4.161 5 C 0.559 3.441 6 O -0.518 6.518 7 N -0.720 5.720 8 C 0.147 3.853 9 C -0.051 4.051 10 C -0.069 4.069 11 C -0.121 4.121 12 C -0.116 4.116 13 C -0.123 4.123 14 C -0.116 4.116 15 C -0.111 4.111 16 C -0.128 4.128 17 C 0.081 3.919 18 H 0.072 0.928 19 O -0.545 6.545 20 C -0.151 4.151 21 C 0.189 3.811 22 O -0.466 6.466 23 C -0.154 4.154 24 C -0.058 4.058 25 O -0.530 6.530 26 Si 0.683 3.317 27 C -0.074 4.074 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.069 0.931 31 H 0.129 0.871 32 H 0.396 0.604 33 H 0.066 0.934 34 H 0.096 0.904 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.120 0.880 40 H 0.081 0.919 41 H 0.102 0.898 42 H 0.383 0.617 43 H 0.096 0.904 44 H 0.080 0.920 45 H 0.393 0.607 46 H 0.111 0.889 47 H 0.376 0.624 48 H -0.252 1.252 49 H -0.255 1.255 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.515 2.858 -0.072 8.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.087 4.087 4 C -0.165 4.165 5 C 0.346 3.654 6 O -0.394 6.394 7 N -0.373 5.373 8 C 0.024 3.976 9 C -0.052 4.052 10 C -0.069 4.069 11 C -0.139 4.139 12 C -0.134 4.134 13 C -0.141 4.141 14 C -0.134 4.134 15 C -0.129 4.129 16 C -0.166 4.166 17 C 0.021 3.979 18 H 0.090 0.910 19 O -0.351 6.351 20 C -0.189 4.189 21 C 0.142 3.858 22 O -0.276 6.276 23 C -0.155 4.155 24 C -0.169 4.169 25 O -0.335 6.335 26 Si 0.584 3.416 27 C -0.092 4.092 28 H 0.095 0.905 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.147 0.853 32 H 0.231 0.769 33 H 0.084 0.916 34 H 0.114 0.886 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.138 0.862 40 H 0.100 0.900 41 H 0.120 0.880 42 H 0.231 0.769 43 H 0.114 0.886 44 H 0.099 0.901 45 H 0.251 0.749 46 H 0.129 0.871 47 H 0.223 0.777 48 H -0.176 1.176 49 H -0.180 1.180 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.648 1.755 0.490 6.893 hybrid contribution 0.291 1.118 0.638 1.320 sum -6.357 2.873 1.128 7.066 Atomic orbital electron populations 1.20835 0.89982 1.03455 1.03040 1.19788 0.96774 0.92232 1.00944 1.21113 0.92180 0.98220 0.97142 1.20420 0.93939 0.93585 1.08531 1.17959 0.87285 0.83211 0.76969 1.90832 1.12966 1.87260 1.48379 1.45749 1.10147 1.05466 1.75927 1.21199 0.93125 0.79980 1.03277 1.20930 0.96319 0.96352 0.91586 1.19607 0.93648 0.99320 0.94302 1.21059 0.93627 1.01052 0.98162 1.21170 0.99979 0.99315 0.92972 1.21208 0.94667 0.99586 0.98609 1.21189 0.94563 0.99691 0.97922 1.20981 0.99953 0.99493 0.92492 1.23239 0.96926 1.02222 0.94166 1.22618 0.90042 0.92871 0.92350 0.90983 1.86513 1.39808 1.36230 1.72588 1.23685 1.02101 0.96555 0.96579 1.18223 0.83965 0.89688 0.93902 1.84811 1.14048 1.95865 1.32921 1.20728 0.94066 0.95875 1.04829 1.24941 1.03743 0.98639 0.89579 1.86582 1.36938 1.94156 1.15827 0.94993 0.83503 0.77718 0.85388 1.20956 0.92551 0.97886 0.97816 0.90464 0.90937 0.91158 0.85325 0.76872 0.91611 0.88616 0.85943 0.85967 0.86068 0.85996 0.86162 0.90002 0.87993 0.76888 0.88577 0.90116 0.74940 0.87148 0.77665 1.17633 1.18004 0.84638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.40 10.00 36.01 0.36 0.76 16 2 C -0.10 0.10 5.87 -104.67 -0.61 -0.52 16 3 C -0.07 0.00 9.18 -39.20 -0.36 -0.35 16 4 C -0.16 -0.44 5.89 -104.85 -0.62 -1.06 16 5 C 0.56 2.44 7.76 -12.47 -0.10 2.35 16 6 O -0.52 -4.15 15.16 -16.59 -0.25 -4.40 16 7 N -0.72 -1.08 5.03 -61.35 -0.31 -1.39 16 8 C 0.15 0.21 4.86 -4.04 -0.02 0.19 16 9 C -0.05 0.05 0.65 -154.84 -0.10 -0.05 16 10 C -0.07 0.03 4.85 -104.62 -0.51 -0.48 16 11 C -0.12 0.12 9.05 -39.58 -0.36 -0.24 16 12 C -0.12 0.07 10.05 -39.58 -0.40 -0.32 16 13 C -0.12 0.01 10.05 -39.58 -0.40 -0.38 16 14 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 15 C -0.11 -0.03 9.23 -39.59 -0.37 -0.40 16 16 C -0.13 0.21 5.87 -25.92 -0.15 0.06 16 17 C 0.08 -0.12 5.28 -25.92 -0.14 -0.26 16 18 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 19 O -0.55 0.02 11.58 -35.23 -0.41 -0.39 16 20 C -0.15 0.26 6.92 -25.91 -0.18 0.08 16 21 C 0.19 0.63 6.69 -38.70 -0.26 0.37 16 22 O -0.47 -2.20 10.91 -40.50 -0.44 -2.64 16 23 C -0.15 -0.18 5.27 -104.52 -0.55 -0.73 16 24 C -0.06 -0.05 2.38 36.01 0.09 0.03 16 25 O -0.53 -1.11 12.88 -35.23 -0.45 -1.56 16 26 Si 0.68 -0.60 29.91 -169.99 -5.08 -5.68 16 27 C -0.07 0.06 8.30 -39.53 -0.33 -0.27 16 28 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 30 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 31 H 0.13 -0.31 6.40 -52.49 -0.34 -0.65 16 32 H 0.40 -0.25 5.92 -40.82 -0.24 -0.50 16 33 H 0.07 0.16 7.80 -51.93 -0.41 -0.25 16 34 H 0.10 0.31 6.06 -51.93 -0.31 -0.01 16 35 H 0.12 -0.34 6.42 -52.49 -0.34 -0.68 16 36 H 0.12 -0.28 8.06 -52.49 -0.42 -0.70 16 37 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 38 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.12 -0.05 8.06 -52.48 -0.42 -0.47 16 40 H 0.08 -0.07 7.36 -51.93 -0.38 -0.45 16 41 H 0.10 -0.30 6.80 -51.93 -0.35 -0.65 16 42 H 0.38 -1.39 9.12 45.56 0.42 -0.98 16 43 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 44 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 45 H 0.39 0.51 9.06 45.56 0.41 0.92 16 46 H 0.11 0.15 7.83 -51.93 -0.41 -0.26 16 47 H 0.38 -0.75 8.70 45.56 0.40 -0.35 16 48 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 49 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 50 H 0.14 -0.46 5.10 -52.48 -0.27 -0.73 16 LS Contribution 405.32 15.07 6.11 6.11 Total: 0.00 -11.11 405.32 -11.47 -22.58 By element: Atomic # 1 Polarization: -5.73 SS G_CDS: -5.23 Total: -10.96 kcal Atomic # 6 Polarization: 3.74 SS G_CDS: -5.39 Total: -1.65 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.31 Total: -1.39 kcal Atomic # 8 Polarization: -7.44 SS G_CDS: -1.56 Total: -9.00 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.08 Total: -5.68 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -11.11 -11.47 -22.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_13422088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.794 kcal (2) G-P(sol) polarization free energy of solvation -11.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds