Wall clock time and date at job start Sat Mar 6 2021 23:25:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47184 * 2 1 4 4 C 1.50695 * 109.47534 * 120.00568 * 2 1 3 5 5 C 1.38709 * 120.03060 * 74.96929 * 4 2 1 6 6 O 1.35900 * 120.05456 * 0.05288 * 5 4 2 7 7 C 1.42901 * 116.99693 * 179.97438 * 6 5 4 8 8 C 1.50707 * 109.46718 * 179.97438 * 7 6 5 9 9 O 1.21279 * 119.99983 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99704 * 180.02562 * 8 7 6 11 11 C 1.46498 * 120.00002 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.47385 * 174.13693 * 11 10 8 13 13 C 1.50697 * 112.84908 * 299.66786 * 12 11 10 14 14 C 1.38234 * 120.00223 * 113.64162 * 13 12 11 15 15 C 1.38243 * 119.99801 * 179.76422 * 14 13 12 16 16 C 1.38234 * 119.99803 * 0.50309 * 15 14 13 17 17 C 1.38236 * 119.99972 * 359.74620 * 16 15 14 18 18 C 1.38227 * 120.00451 * 0.02562 * 17 16 15 19 19 C 1.53778 * 113.61712 * 168.46330 * 12 11 10 20 20 C 1.54051 * 86.98778 * 270.84231 * 19 12 11 21 21 H 1.09001 * 113.61533 * 220.01906 * 20 19 12 22 22 O 1.42899 * 113.69097 * 89.12565 * 20 19 12 23 23 C 1.53783 * 87.07793 * 334.56682 * 20 19 12 24 24 C 1.38755 * 119.88830 * 180.02562 * 5 4 2 25 25 C 1.38126 * 119.94396 * 0.02904 * 24 5 4 26 26 C 1.38284 * 120.05533 * 359.97280 * 25 24 5 27 27 C 1.38170 * 120.02610 * 254.99839 * 4 2 1 28 28 H 0.96698 * 114.00283 * 59.99554 * 1 2 3 29 29 H 1.08999 * 109.46847 * 240.00361 * 2 1 3 30 30 H 1.48503 * 109.99932 * 298.68349 * 3 2 1 31 31 H 1.48498 * 110.00170 * 60.00467 * 3 2 1 32 32 H 1.08999 * 109.47359 * 299.99433 * 7 6 5 33 33 H 1.09003 * 109.46976 * 59.99927 * 7 6 5 34 34 H 0.97003 * 119.99961 * 359.97438 * 10 8 7 35 35 H 1.09000 * 109.47114 * 294.14542 * 11 10 8 36 36 H 1.09000 * 109.46721 * 54.13545 * 11 10 8 37 37 H 1.08001 * 120.00081 * 359.97438 * 14 13 12 38 38 H 1.08003 * 119.99586 * 180.23182 * 15 14 13 39 39 H 1.07999 * 119.99949 * 179.72508 * 16 15 14 40 40 H 1.08003 * 119.99329 * 179.97438 * 17 16 15 41 41 H 1.07998 * 120.00665 * 179.97438 * 18 17 16 42 42 H 1.09005 * 113.61180 * 25.43815 * 19 12 11 43 43 H 1.09002 * 113.61603 * 156.33482 * 19 12 11 44 44 H 0.96699 * 114.00091 * 82.46649 * 22 20 19 45 45 H 1.08994 * 113.61488 * 270.88463 * 23 20 19 46 46 H 1.09000 * 113.68946 * 139.98577 * 23 20 19 47 47 H 1.08004 * 120.02936 * 179.97438 * 24 5 4 48 48 H 1.08004 * 119.96934 * 179.97438 * 25 24 5 49 49 H 1.08000 * 119.94300 * 180.28230 * 26 25 24 50 50 H 1.08005 * 119.96950 * 359.97047 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.8692 -2.0941 1.3070 6 8 1.3563 -2.8107 0.2725 7 6 1.3241 -4.2316 0.4206 8 6 0.7266 -4.8521 -0.8160 9 8 0.3636 -4.1469 -1.7335 10 7 0.5946 -6.1907 -0.9018 11 6 0.0133 -6.7939 -2.1036 12 6 0.1116 -8.3177 -2.0082 13 6 1.5328 -8.8066 -1.8981 14 6 1.9649 -9.4196 -0.7369 15 6 3.2673 -9.8725 -0.6378 16 6 4.1404 -9.7029 -1.6960 17 6 3.7096 -9.0853 -2.8553 18 6 2.4061 -8.6367 -2.9562 19 6 -0.7131 -9.0563 -3.0754 20 6 -1.8874 -9.0163 -2.0790 21 1 -2.4735 -9.9351 -2.0577 22 8 -2.6969 -7.8442 -2.1924 23 6 -0.8338 -8.9316 -0.9620 24 6 2.3322 -2.7452 2.4414 25 6 2.8531 -2.0145 3.4915 26 6 2.9139 -0.6353 3.4126 27 6 2.4539 0.0158 2.2832 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 1.5878 2.4585 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 2.3383 -4.6054 0.5612 33 1 0.7171 -4.4929 1.2875 34 1 0.8846 -6.7547 -0.1678 35 1 -1.0335 -6.5017 -2.1868 36 1 0.5576 -6.4490 -2.9828 37 1 1.2841 -9.5478 0.0916 38 1 3.6038 -10.3548 0.2681 39 1 5.1591 -10.0528 -1.6170 40 1 4.3920 -8.9525 -3.6819 41 1 2.0697 -8.1538 -3.8617 42 1 -0.8844 -8.4698 -3.9781 43 1 -0.3531 -10.0634 -3.2858 44 1 -3.3614 -7.8915 -2.8933 45 1 -0.5067 -9.9046 -0.5956 46 1 -1.1013 -8.2449 -0.1589 47 1 2.2845 -3.8224 2.5037 48 1 3.2132 -2.5209 4.3749 49 1 3.3258 -0.0660 4.2329 50 1 2.5025 1.0931 2.2240 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_2989392.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:25:19 Heat of formation + Delta-G solvation = -57.193498 kcal Electronic energy + Delta-G solvation = -33554.623101 eV Core-core repulsion = 29094.144010 eV Total energy + Delta-G solvation = -4460.479092 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -41.99302 -41.38157 -40.15904 -39.38998 -38.31618 -37.40696 -36.43639 -34.98966 -32.80679 -32.02075 -31.82320 -31.29522 -30.03972 -27.85510 -27.02714 -26.51398 -24.78968 -23.45754 -23.25932 -22.45806 -22.36381 -21.43722 -20.06326 -19.24421 -18.73868 -18.32751 -18.21217 -17.79183 -17.33274 -17.15347 -16.82020 -16.60678 -16.47316 -15.93024 -15.79326 -15.60207 -15.45182 -15.29385 -15.21046 -14.89988 -14.60644 -14.47757 -14.25514 -14.09906 -13.82188 -13.71953 -13.67876 -13.44576 -13.22444 -13.10819 -12.91796 -12.83287 -12.61803 -12.34197 -12.07590 -11.98586 -11.71693 -11.69144 -11.62203 -11.39988 -10.85792 -10.74423 -10.22006 -10.00567 -9.90567 -9.90207 -9.69535 -9.11937 -4.86333 0.29880 0.34496 0.41013 0.50034 1.41384 1.55485 1.63368 1.69151 2.04352 2.63567 2.73175 2.75087 2.95035 3.22980 3.40536 3.53211 3.55760 3.61736 3.65827 3.80831 3.87801 3.94696 3.97012 4.00005 4.01215 4.03750 4.15596 4.17175 4.27450 4.33397 4.40307 4.49485 4.53092 4.57075 4.57802 4.62274 4.67982 4.71632 4.82066 4.91677 4.93103 5.03697 5.03836 5.06581 5.13229 5.33599 5.38374 5.42901 5.50504 5.55927 5.56753 5.59008 5.77477 6.00285 6.32972 6.48471 6.57305 6.68967 7.21993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.066 4.066 3 Si 0.685 3.315 4 C -0.101 4.101 5 C 0.152 3.848 6 O -0.279 6.279 7 C 0.040 3.960 8 C 0.517 3.483 9 O -0.512 6.512 10 N -0.721 5.721 11 C 0.146 3.854 12 C -0.051 4.051 13 C -0.069 4.069 14 C -0.122 4.122 15 C -0.117 4.117 16 C -0.122 4.122 17 C -0.115 4.115 18 C -0.110 4.110 19 C -0.151 4.151 20 C 0.080 3.920 21 H 0.073 0.927 22 O -0.547 6.547 23 C -0.127 4.127 24 C -0.212 4.212 25 C -0.073 4.073 26 C -0.152 4.152 27 C -0.078 4.078 28 H 0.377 0.623 29 H 0.076 0.924 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.093 0.907 33 H 0.092 0.908 34 H 0.400 0.600 35 H 0.096 0.904 36 H 0.071 0.929 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.120 0.880 42 H 0.080 0.920 43 H 0.096 0.904 44 H 0.384 0.616 45 H 0.102 0.898 46 H 0.082 0.918 47 H 0.129 0.871 48 H 0.129 0.871 49 H 0.129 0.871 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.028 -5.714 1.308 6.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.176 4.176 3 Si 0.587 3.413 4 C -0.102 4.102 5 C 0.106 3.894 6 O -0.190 6.190 7 C -0.039 4.039 8 C 0.301 3.699 9 O -0.386 6.386 10 N -0.375 5.375 11 C 0.023 3.977 12 C -0.052 4.052 13 C -0.069 4.069 14 C -0.140 4.140 15 C -0.135 4.135 16 C -0.140 4.140 17 C -0.133 4.133 18 C -0.128 4.128 19 C -0.189 4.189 20 C 0.020 3.980 21 H 0.091 0.909 22 O -0.353 6.353 23 C -0.165 4.165 24 C -0.231 4.231 25 C -0.091 4.091 26 C -0.170 4.170 27 C -0.096 4.096 28 H 0.225 0.775 29 H 0.094 0.906 30 H -0.187 1.187 31 H -0.180 1.180 32 H 0.111 0.889 33 H 0.110 0.890 34 H 0.234 0.766 35 H 0.114 0.886 36 H 0.089 0.911 37 H 0.141 0.859 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.138 0.862 42 H 0.099 0.901 43 H 0.115 0.885 44 H 0.232 0.768 45 H 0.120 0.880 46 H 0.100 0.900 47 H 0.147 0.853 48 H 0.146 0.854 49 H 0.147 0.853 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.925 -4.390 1.470 5.477 hybrid contribution -1.090 -1.042 -0.453 1.574 sum 1.834 -5.432 1.018 5.823 Atomic orbital electron populations 1.86601 1.17668 1.80102 1.49322 1.24644 0.84618 1.10233 0.98095 0.95234 0.91426 0.74696 0.79965 1.18593 1.04478 0.90207 0.96905 1.18791 0.93045 0.90812 0.86789 1.86207 1.77491 1.16847 1.38493 1.22460 1.02425 0.81361 0.97676 1.19934 0.79327 0.82361 0.88256 1.90774 1.47627 1.61028 1.39198 1.45659 1.64775 1.06117 1.20918 1.21253 1.00477 0.88816 0.87125 1.20930 0.90889 0.94441 0.98891 1.19582 0.94346 0.98704 0.94301 1.21072 0.96138 0.99354 0.97425 1.21177 0.93703 0.99700 0.98878 1.21215 0.99853 0.99268 0.93673 1.21194 0.95923 0.98187 0.98037 1.20979 0.93472 0.99764 0.98562 1.23725 0.96307 1.01323 0.97559 1.22693 0.90619 0.88326 0.96333 0.90941 1.86476 1.51041 1.38626 1.59190 1.23251 0.94166 1.02200 0.96838 1.21266 1.06573 1.00402 0.94858 1.21010 0.96375 0.94074 0.97632 1.21039 1.02919 0.94565 0.98463 1.20982 0.96584 0.99835 0.92169 0.77515 0.90573 1.18663 1.18019 0.88939 0.88967 0.76637 0.88585 0.91098 0.85877 0.85956 0.86044 0.85983 0.86217 0.90103 0.88510 0.76799 0.87998 0.89962 0.85285 0.85353 0.85257 0.84813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -2.58 12.86 -35.23 -0.45 -3.03 16 2 C -0.07 -0.22 2.37 36.00 0.09 -0.13 16 3 Si 0.69 0.68 30.20 -169.99 -5.13 -4.45 16 4 C -0.10 -0.37 5.30 -104.48 -0.55 -0.93 16 5 C 0.15 0.56 6.66 -39.22 -0.26 0.30 16 6 O -0.28 -1.32 9.00 -39.34 -0.35 -1.68 16 7 C 0.04 0.04 5.22 36.01 0.19 0.23 16 8 C 0.52 1.68 7.91 -10.98 -0.09 1.59 16 9 O -0.51 -4.10 16.49 -14.35 -0.24 -4.34 16 10 N -0.72 -0.25 5.30 -60.29 -0.32 -0.57 16 11 C 0.15 0.11 4.81 -4.04 -0.02 0.09 16 12 C -0.05 0.07 0.63 -154.85 -0.10 -0.02 16 13 C -0.07 0.06 4.41 -104.62 -0.46 -0.40 16 14 C -0.12 0.17 9.05 -39.58 -0.36 -0.19 16 15 C -0.12 0.11 10.05 -39.58 -0.40 -0.28 16 16 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 17 C -0.12 0.01 10.05 -39.59 -0.40 -0.39 16 18 C -0.11 0.00 9.42 -39.58 -0.37 -0.37 16 19 C -0.15 0.32 6.97 -25.78 -0.18 0.14 16 20 C 0.08 -0.16 5.28 -25.78 -0.14 -0.30 16 21 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 22 O -0.55 0.40 11.51 -35.23 -0.41 0.00 16 23 C -0.13 0.27 6.10 -25.91 -0.16 0.11 16 24 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 25 C -0.07 -0.04 10.04 -39.61 -0.40 -0.43 16 26 C -0.15 -0.12 10.04 -39.56 -0.40 -0.52 16 27 C -0.08 -0.16 8.66 -39.61 -0.34 -0.50 16 28 H 0.38 0.39 8.74 45.56 0.40 0.79 16 29 H 0.08 0.25 7.83 -51.93 -0.41 -0.15 16 30 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 31 H -0.26 -0.81 6.75 56.52 0.38 -0.43 16 32 H 0.09 -0.15 7.66 -51.93 -0.40 -0.54 16 33 H 0.09 -0.10 7.66 -51.93 -0.40 -0.50 16 34 H 0.40 -0.82 8.25 -40.82 -0.34 -1.16 16 35 H 0.10 0.23 5.92 -51.93 -0.31 -0.08 16 36 H 0.07 0.14 8.06 -51.93 -0.42 -0.27 16 37 H 0.12 -0.38 6.44 -52.49 -0.34 -0.72 16 38 H 0.12 -0.31 8.06 -52.48 -0.42 -0.73 16 39 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 40 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 41 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 42 H 0.08 -0.16 8.10 -51.93 -0.42 -0.58 16 43 H 0.10 -0.23 8.09 -51.93 -0.42 -0.65 16 44 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 45 H 0.10 -0.33 6.82 -51.93 -0.35 -0.68 16 46 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 47 H 0.13 -0.17 6.30 -52.48 -0.33 -0.50 16 48 H 0.13 -0.24 8.06 -52.48 -0.42 -0.67 16 49 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 50 H 0.13 0.08 4.90 -52.48 -0.26 -0.18 16 LS Contribution 409.73 15.07 6.17 6.17 Total: 0.00 -11.03 409.73 -12.00 -23.03 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -6.17 Total: -12.17 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -5.10 Total: -2.97 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.32 Total: -0.57 kcal Atomic # 8 Polarization: -7.60 SS G_CDS: -1.45 Total: -9.05 kcal Atomic # 14 Polarization: 0.68 SS G_CDS: -5.13 Total: -4.45 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.03 -12.00 -23.03 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_2989392.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.165 kcal (2) G-P(sol) polarization free energy of solvation -11.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.997 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.029 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds