Wall clock time and date at job start Sat Mar 6 2021 23:25:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86306 * 109.46867 * 2 1 4 4 C 1.50700 * 109.47480 * 239.99825 * 2 1 3 5 5 C 1.38259 * 119.94163 * 299.99772 * 4 2 1 6 6 C 1.38141 * 120.05540 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94713 * 0.02562 * 6 5 4 8 8 O 1.35901 * 120.05946 * 180.02562 * 7 6 5 9 9 C 1.42899 * 116.99536 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.46584 * 179.97438 * 9 8 7 11 11 O 1.21287 * 120.00387 * 0.02562 * 10 9 8 12 12 N 1.34783 * 119.99921 * 179.97438 * 10 9 8 13 13 C 1.46500 * 119.99820 * 179.97438 * 12 10 9 14 14 C 1.52999 * 109.47037 * 182.27959 * 13 12 10 15 15 C 1.50706 * 112.85088 * 65.24077 * 14 13 12 16 16 C 1.38229 * 120.00432 * 246.06143 * 15 14 13 17 17 C 1.38234 * 120.00110 * 179.78893 * 16 15 14 18 18 C 1.38237 * 119.99916 * 0.43824 * 17 16 15 19 19 C 1.38239 * 119.99739 * 359.81243 * 18 17 16 20 20 C 1.38233 * 119.99422 * 66.33203 * 15 14 13 21 21 C 1.53780 * 113.61541 * 294.04979 * 14 13 12 22 22 C 1.53777 * 87.07951 * 270.88255 * 21 14 13 23 23 H 1.09003 * 113.61825 * 219.93127 * 22 21 14 24 24 O 1.42903 * 113.61770 * 89.11666 * 22 21 14 25 25 C 1.53780 * 113.61661 * 196.43888 * 14 13 12 26 26 C 1.38738 * 119.88251 * 0.27313 * 7 6 5 27 27 C 1.38149 * 119.94280 * 359.47260 * 26 7 6 28 28 H 0.96701 * 113.99989 * 299.99877 * 1 2 3 29 29 H 1.09000 * 109.47243 * 119.99198 * 2 1 3 30 30 H 1.48504 * 109.99554 * 299.99478 * 3 2 1 31 31 H 1.48499 * 110.00081 * 61.31558 * 3 2 1 32 32 H 1.08008 * 119.97620 * 359.97438 * 5 4 2 33 33 H 1.08001 * 120.02797 * 179.97438 * 6 5 4 34 34 H 1.08997 * 109.47265 * 60.00398 * 9 8 7 35 35 H 1.08997 * 109.47180 * 299.99344 * 9 8 7 36 36 H 0.96998 * 119.99923 * 0.02562 * 12 10 9 37 37 H 1.09000 * 109.46847 * 62.28379 * 13 12 10 38 38 H 1.08998 * 109.47279 * 302.28226 * 13 12 10 39 39 H 1.08007 * 119.99856 * 359.97438 * 16 15 14 40 40 H 1.08000 * 119.99963 * 180.27559 * 17 16 15 41 41 H 1.07993 * 119.99782 * 179.83521 * 18 17 16 42 42 H 1.08001 * 119.99468 * 179.97438 * 19 18 17 43 43 H 1.08004 * 120.00404 * 359.97438 * 20 15 14 44 44 H 1.08998 * 113.61384 * 25.42869 * 21 14 13 45 45 H 1.08997 * 113.61805 * 156.25170 * 21 14 13 46 46 H 0.96696 * 114.00247 * 180.02562 * 24 22 21 47 47 H 1.09002 * 113.61556 * 203.66479 * 25 14 13 48 48 H 1.08994 * 113.61248 * 334.56858 * 25 14 13 49 49 H 1.07995 * 120.02691 * 179.71551 * 26 7 6 50 50 H 1.07994 * 119.96630 * 180.23035 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 1.5968 -2.0342 -1.4480 6 6 2.0556 -2.6875 -2.5753 7 6 2.8533 -2.0145 -3.4893 8 8 3.3055 -2.6549 -4.5994 9 6 4.1225 -1.8998 -5.4963 10 6 4.5269 -2.7685 -6.6595 11 8 4.1520 -3.9206 -6.7151 12 7 5.3044 -2.2648 -7.6385 13 6 5.6980 -3.1094 -8.7689 14 6 6.6183 -2.3183 -9.7005 15 6 7.9316 -1.9557 -9.0563 16 6 8.2363 -0.6308 -8.8061 17 6 9.4391 -0.2986 -8.2112 18 6 10.3411 -1.2907 -7.8748 19 6 10.0385 -2.6152 -8.1298 20 6 8.8339 -2.9477 -8.7207 21 6 5.9237 -1.1334 -10.3922 22 6 5.5424 -2.1136 -11.5141 23 1 5.6229 -1.6860 -12.5136 24 8 4.2972 -2.7792 -11.2941 25 6 6.7694 -2.9461 -11.0962 26 6 3.1928 -0.6880 -3.2656 27 6 2.7270 -0.0376 -2.1392 28 1 -0.3933 0.4417 0.7651 29 1 1.7924 -0.5137 0.8900 30 1 1.5615 2.4678 -1.2086 31 1 1.5878 2.4587 1.2242 32 1 0.9761 -2.5579 -0.7359 33 1 1.7943 -3.7217 -2.7446 34 1 5.0145 -1.5556 -4.9730 35 1 3.5614 -1.0400 -5.8624 36 1 5.6039 -1.3433 -7.5942 37 1 4.8085 -3.4217 -9.3161 38 1 6.2245 -3.9892 -8.3991 39 1 7.5333 0.1446 -9.0727 40 1 9.6752 0.7362 -8.0117 41 1 11.2818 -1.0309 -7.4125 42 1 10.7434 -3.3903 -7.8673 43 1 8.5976 -3.9826 -8.9198 44 1 5.0670 -0.7468 -9.8403 45 1 6.6110 -0.3495 -10.7104 46 1 4.0521 -3.3973 -11.9962 47 1 7.6876 -2.6575 -11.6077 48 1 6.5949 -4.0219 -11.1122 49 1 3.8174 -0.1632 -3.9732 50 1 2.9880 0.9960 -1.9666 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_2989410.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:25:23 Heat of formation + Delta-G solvation = -59.439333 kcal Electronic energy + Delta-G solvation = -32788.239572 eV Core-core repulsion = 28327.663093 eV Total energy + Delta-G solvation = -4460.576479 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.99881 -41.33638 -40.19108 -39.39254 -38.81455 -37.26466 -36.43665 -34.99238 -32.42194 -32.00974 -31.81872 -31.75750 -30.29329 -27.97062 -27.04672 -26.09945 -24.77241 -23.85424 -23.30070 -22.48023 -22.16016 -21.47194 -20.06867 -19.40672 -18.74229 -18.53264 -18.22796 -17.79886 -17.39345 -17.17151 -16.73250 -16.62030 -16.50159 -15.91999 -15.79642 -15.64764 -15.60453 -15.31756 -15.28765 -14.76484 -14.53203 -14.38819 -14.26169 -14.14465 -14.00183 -13.88746 -13.76984 -13.43185 -13.34380 -13.22141 -13.11415 -12.83271 -12.44004 -12.33946 -12.12227 -11.98704 -11.85523 -11.71982 -11.68597 -11.39682 -10.86194 -10.77148 -10.47307 -10.01361 -9.95655 -9.89925 -9.69100 -9.12311 -4.97373 0.34948 0.36466 0.38556 0.41481 1.29279 1.52865 1.59047 1.61543 1.95637 2.61370 2.69302 2.75193 2.95051 3.23001 3.36340 3.40271 3.53391 3.60055 3.65818 3.77229 3.84660 3.90753 3.91297 3.96769 3.99346 4.01464 4.04143 4.15914 4.27417 4.31878 4.41634 4.49363 4.52947 4.53491 4.57847 4.61559 4.67572 4.71419 4.81783 4.92162 4.93296 5.02456 5.04072 5.06606 5.12943 5.23331 5.32702 5.37533 5.50709 5.56342 5.58804 5.59296 5.75069 6.00719 6.31264 6.45512 6.47832 6.57383 7.20373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.071 4.071 3 Si 0.679 3.321 4 C -0.111 4.111 5 C -0.050 4.050 6 C -0.146 4.146 7 C 0.134 3.866 8 O -0.287 6.287 9 C 0.040 3.960 10 C 0.516 3.484 11 O -0.513 6.513 12 N -0.720 5.720 13 C 0.146 3.854 14 C -0.051 4.051 15 C -0.069 4.069 16 C -0.122 4.122 17 C -0.116 4.116 18 C -0.122 4.122 19 C -0.115 4.115 20 C -0.110 4.110 21 C -0.127 4.127 22 C 0.080 3.920 23 H 0.073 0.927 24 O -0.547 6.547 25 C -0.151 4.151 26 C -0.206 4.206 27 C -0.073 4.073 28 H 0.379 0.621 29 H 0.076 0.924 30 H -0.255 1.255 31 H -0.262 1.262 32 H 0.133 0.867 33 H 0.136 0.864 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.400 0.600 37 H 0.097 0.903 38 H 0.070 0.930 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.122 0.878 43 H 0.120 0.880 44 H 0.082 0.918 45 H 0.102 0.898 46 H 0.384 0.616 47 H 0.096 0.904 48 H 0.080 0.920 49 H 0.132 0.868 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.417 4.264 -1.732 7.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.580 3.420 4 C -0.112 4.112 5 C -0.068 4.068 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.199 6.199 9 C -0.038 4.038 10 C 0.301 3.699 11 O -0.387 6.387 12 N -0.374 5.374 13 C 0.023 3.977 14 C -0.052 4.052 15 C -0.070 4.070 16 C -0.139 4.139 17 C -0.135 4.135 18 C -0.140 4.140 19 C -0.133 4.133 20 C -0.128 4.128 21 C -0.165 4.165 22 C 0.020 3.980 23 H 0.091 0.909 24 O -0.353 6.353 25 C -0.189 4.189 26 C -0.224 4.224 27 C -0.091 4.091 28 H 0.227 0.773 29 H 0.094 0.906 30 H -0.180 1.180 31 H -0.187 1.187 32 H 0.151 0.849 33 H 0.154 0.846 34 H 0.112 0.888 35 H 0.112 0.888 36 H 0.234 0.766 37 H 0.115 0.885 38 H 0.088 0.912 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.140 0.860 43 H 0.138 0.862 44 H 0.100 0.900 45 H 0.120 0.880 46 H 0.232 0.768 47 H 0.115 0.885 48 H 0.099 0.901 49 H 0.150 0.850 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.990 4.081 -1.854 6.707 hybrid contribution -0.651 0.250 0.041 0.699 sum 4.338 4.331 -1.813 6.392 Atomic orbital electron populations 1.86598 1.17944 1.80099 1.49724 1.24731 0.84334 1.10730 0.98269 0.95197 0.91709 0.74803 0.80266 1.19153 1.00832 0.94641 0.96540 1.20821 0.96485 0.93529 0.95961 1.20512 1.00494 1.01294 0.94133 1.19072 0.94275 0.91077 0.86697 1.86174 1.64253 1.38600 1.30919 1.22464 0.96302 0.94574 0.90503 1.19949 0.78900 0.88072 0.83022 1.90783 1.53193 1.17631 1.77136 1.45652 1.52565 1.16063 1.23099 1.21255 0.98697 0.92202 0.85518 1.20927 0.92280 0.97744 0.94220 1.19582 0.94927 0.93445 0.98998 1.21064 0.97384 0.95577 0.99917 1.21175 0.94115 0.99490 0.98671 1.21216 0.99654 0.93075 1.00068 1.21196 0.96909 0.96572 0.98657 1.20983 0.93882 0.99163 0.98814 1.23240 1.00372 0.96092 0.96754 1.22693 0.83599 0.93664 0.98012 0.90942 1.86480 1.37417 1.60968 1.50460 1.23724 0.99726 1.01039 0.94418 1.21142 1.06329 0.94254 1.00724 1.20702 0.96469 0.98975 0.92927 0.77319 0.90634 1.18010 1.18694 0.84911 0.84607 0.88759 0.88819 0.76608 0.88508 0.91203 0.85884 0.85955 0.86047 0.85982 0.86188 0.89967 0.87974 0.76794 0.88518 0.90084 0.84988 0.85280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.88 12.74 -35.23 -0.45 -1.33 16 2 C -0.07 -0.02 2.81 36.01 0.10 0.08 16 3 Si 0.68 -0.47 29.78 -169.99 -5.06 -5.54 16 4 C -0.11 -0.20 5.42 -104.61 -0.57 -0.77 16 5 C -0.05 -0.11 9.60 -39.61 -0.38 -0.49 16 6 C -0.15 -0.43 9.99 -39.43 -0.39 -0.82 16 7 C 0.13 0.39 6.69 -39.21 -0.26 0.13 16 8 O -0.29 -1.14 9.67 -39.34 -0.38 -1.52 16 9 C 0.04 0.01 5.22 36.01 0.19 0.20 16 10 C 0.52 1.44 7.91 -10.98 -0.09 1.36 16 11 O -0.51 -3.96 16.50 -14.36 -0.24 -4.20 16 12 N -0.72 0.03 5.18 -60.29 -0.31 -0.28 16 13 C 0.15 0.07 4.82 -4.04 -0.02 0.05 16 14 C -0.05 0.09 0.62 -154.85 -0.10 -0.01 16 15 C -0.07 0.07 4.60 -104.62 -0.48 -0.41 16 16 C -0.12 0.19 9.05 -39.59 -0.36 -0.17 16 17 C -0.12 0.13 10.05 -39.58 -0.40 -0.27 16 18 C -0.12 0.07 10.05 -39.58 -0.40 -0.33 16 19 C -0.12 0.02 10.05 -39.58 -0.40 -0.37 16 20 C -0.11 0.02 9.34 -39.58 -0.37 -0.35 16 21 C -0.13 0.30 5.96 -25.92 -0.15 0.15 16 22 C 0.08 -0.17 5.28 -25.78 -0.14 -0.31 16 23 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 24 O -0.55 0.48 11.51 -35.23 -0.41 0.08 16 25 C -0.15 0.34 6.96 -25.78 -0.18 0.16 16 26 C -0.21 -0.18 9.04 -39.43 -0.36 -0.53 16 27 C -0.07 -0.06 8.66 -39.61 -0.34 -0.41 16 28 H 0.38 -0.90 8.74 45.56 0.40 -0.50 16 29 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 31 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 32 H 0.13 0.15 8.06 -52.48 -0.42 -0.27 16 33 H 0.14 0.31 8.06 -52.49 -0.42 -0.11 16 34 H 0.09 -0.21 7.65 -51.93 -0.40 -0.61 16 35 H 0.09 -0.19 7.67 -51.93 -0.40 -0.59 16 36 H 0.40 -1.02 8.18 -40.82 -0.33 -1.35 16 37 H 0.10 0.21 5.94 -51.93 -0.31 -0.10 16 38 H 0.07 0.12 7.98 -51.93 -0.41 -0.29 16 39 H 0.12 -0.41 6.42 -52.48 -0.34 -0.75 16 40 H 0.12 -0.33 8.06 -52.49 -0.42 -0.75 16 41 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 42 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 43 H 0.12 -0.09 8.06 -52.48 -0.42 -0.51 16 44 H 0.08 -0.14 7.89 -51.93 -0.41 -0.55 16 45 H 0.10 -0.35 6.80 -51.93 -0.35 -0.70 16 46 H 0.38 -1.70 9.12 45.56 0.42 -1.28 16 47 H 0.10 -0.24 8.09 -51.93 -0.42 -0.66 16 48 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 49 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 50 H 0.13 -0.17 4.87 -52.49 -0.26 -0.42 16 LS Contribution 409.92 15.07 6.18 6.18 Total: 0.00 -11.05 409.92 -11.90 -22.94 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -6.14 Total: -13.22 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -5.09 Total: -3.12 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.31 Total: -0.28 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.47 Total: -6.97 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.06 Total: -5.54 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -11.05 -11.90 -22.94 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_2989410.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.496 kcal (2) G-P(sol) polarization free energy of solvation -11.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.944 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds