Wall clock time and date at job start Sat Mar 6 2021 23:25:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86296 * 109.47411 * 2 1 4 4 C 1.50704 * 109.46627 * 119.99725 * 2 1 3 5 5 C 1.38265 * 119.94425 * 65.00636 * 4 2 1 6 6 C 1.38145 * 120.05761 * 180.02562 * 5 4 2 7 7 C 1.38726 * 119.94488 * 359.97438 * 6 5 4 8 8 O 1.35895 * 120.06144 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00285 * 179.97438 * 8 7 6 10 10 C 1.53001 * 109.46795 * 180.02562 * 9 8 7 11 11 C 1.50706 * 109.47103 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99502 * 359.97438 * 11 10 9 13 13 N 1.34772 * 120.00155 * 180.02562 * 11 10 9 14 14 C 1.46497 * 120.00007 * 179.97438 * 13 11 10 15 15 C 1.53004 * 109.47149 * 184.84869 * 14 13 11 16 16 C 1.50693 * 112.84731 * 65.13573 * 15 14 13 17 17 C 1.38239 * 119.99919 * 245.82763 * 16 15 14 18 18 C 1.38227 * 120.00336 * 180.32300 * 17 16 15 19 19 C 1.38231 * 120.00027 * 359.92974 * 18 17 16 20 20 C 1.38239 * 120.00212 * 0.06918 * 19 18 17 21 21 C 1.38229 * 120.00562 * 66.10274 * 16 15 14 22 22 C 1.53773 * 113.61521 * 293.93395 * 15 14 13 23 23 C 1.53783 * 87.08515 * 270.79996 * 22 15 14 24 24 H 1.08999 * 113.61574 * 220.01700 * 23 22 15 25 25 O 1.42904 * 113.61378 * 89.19987 * 23 22 15 26 26 C 1.53783 * 113.61304 * 196.32487 * 15 14 13 27 27 C 1.38740 * 119.88869 * 0.27689 * 7 6 5 28 28 C 1.38147 * 119.94004 * 359.47169 * 27 7 6 29 29 H 0.96702 * 113.99611 * 60.00285 * 1 2 3 30 30 H 1.08998 * 109.47657 * 239.99465 * 2 1 3 31 31 H 1.48501 * 109.99985 * 298.67677 * 3 2 1 32 32 H 1.48499 * 109.99846 * 59.99768 * 3 2 1 33 33 H 1.08000 * 119.97069 * 359.97176 * 5 4 2 34 34 H 1.07996 * 120.02584 * 179.97438 * 6 5 4 35 35 H 1.09004 * 109.46987 * 60.00701 * 9 8 7 36 36 H 1.08994 * 109.47360 * 300.00226 * 9 8 7 37 37 H 1.09001 * 109.47326 * 60.00246 * 10 9 8 38 38 H 1.09003 * 109.47490 * 300.00059 * 10 9 8 39 39 H 0.97005 * 120.00132 * 0.02562 * 13 11 10 40 40 H 1.09008 * 109.46910 * 64.84930 * 14 13 11 41 41 H 1.09000 * 109.47601 * 304.85406 * 14 13 11 42 42 H 1.08002 * 119.99439 * 0.25746 * 17 16 15 43 43 H 1.08001 * 120.00256 * 179.97438 * 18 17 16 44 44 H 1.08000 * 120.00134 * 180.02562 * 19 18 17 45 45 H 1.07995 * 120.00465 * 179.97438 * 20 19 18 46 46 H 1.08006 * 120.00227 * 359.72547 * 21 16 15 47 47 H 1.09005 * 113.61841 * 25.35201 * 22 15 14 48 48 H 1.09002 * 113.61177 * 156.24908 * 22 15 14 49 49 H 0.96692 * 113.99695 * 180.02562 * 25 23 22 50 50 H 1.08996 * 113.61447 * 203.75105 * 26 15 14 51 51 H 1.08997 * 113.61728 * 334.65690 * 26 15 14 52 52 H 1.07997 * 120.03322 * 179.71925 * 27 7 6 53 53 H 1.07998 * 119.97346 * 180.22966 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.6839 -2.0605 1.3973 6 6 2.1427 -2.7139 2.5247 7 6 2.8526 -2.0144 3.4897 8 8 3.3055 -2.6549 4.5994 9 6 4.0294 -1.8718 5.5505 10 6 4.4555 -2.7584 6.7224 11 6 5.2184 -1.9325 7.7259 12 8 5.4035 -0.7511 7.5233 13 7 5.6958 -2.5068 8.8477 14 6 6.4379 -1.7039 9.8229 15 6 6.9680 -2.6127 10.9338 16 6 7.9886 -3.6055 10.4405 17 6 7.7037 -4.9581 10.4619 18 6 8.6424 -5.8693 10.0156 19 6 9.8656 -5.4281 9.5466 20 6 10.1506 -4.0755 9.5251 21 6 9.2119 -3.1643 9.9719 22 6 5.8608 -3.2434 11.7946 23 6 5.9603 -2.0000 12.6940 24 1 5.8849 -2.2236 13.7581 25 8 5.1026 -0.9309 12.2896 26 6 7.4091 -1.8509 12.1948 27 6 3.0949 -0.6586 3.3226 28 6 2.6384 -0.0110 2.1909 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 1.5880 2.4585 -1.2243 32 1 1.5615 2.4678 1.2085 33 1 1.1308 -2.6045 0.6460 34 1 1.9489 -3.7684 2.6546 35 1 3.3934 -1.0658 5.9168 36 1 4.9142 -1.4489 5.0749 37 1 5.0915 -3.5642 6.3559 38 1 3.5708 -3.1817 7.1983 39 1 5.5487 -3.4519 9.0092 40 1 5.7762 -0.9520 10.2532 41 1 7.2739 -1.2110 9.3268 42 1 6.7480 -5.3028 10.8283 43 1 8.4200 -6.9260 10.0327 44 1 10.5988 -6.1400 9.1975 45 1 11.1063 -3.7308 9.1591 46 1 9.4347 -2.1076 9.9551 47 1 4.9048 -3.3339 11.2788 48 1 6.1647 -4.1658 12.2895 49 1 5.1610 -0.1459 12.8512 50 1 8.1370 -2.3918 12.7994 51 1 7.7012 -0.8187 12.0016 52 1 3.6434 -0.1108 4.0746 53 1 2.8300 1.0436 2.0585 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_4549602.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:25:26 Heat of formation + Delta-G solvation = -69.159208 kcal Electronic energy + Delta-G solvation = -34382.486381 eV Core-core repulsion = 29765.950798 eV Total energy + Delta-G solvation = -4616.535583 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -41.91182 -41.32693 -40.47496 -39.27813 -39.09014 -37.38513 -36.41883 -35.03437 -33.44365 -32.08692 -31.89382 -31.70940 -31.55880 -28.76195 -26.98742 -26.46141 -25.51519 -24.53482 -23.43644 -23.17178 -22.31762 -22.06639 -21.42550 -19.94661 -19.46213 -18.61626 -18.55172 -17.94732 -17.66085 -17.50584 -17.33970 -16.84888 -16.78855 -16.48602 -16.05798 -15.80790 -15.77035 -15.62405 -15.47076 -15.24597 -14.73055 -14.62181 -14.48056 -14.40127 -14.33371 -14.12473 -14.02825 -13.86429 -13.72889 -13.57462 -13.16596 -13.06200 -12.91511 -12.81802 -12.68634 -12.44101 -12.21450 -12.02595 -11.87896 -11.75716 -11.69692 -11.59340 -11.27897 -11.05354 -10.69882 -10.48226 -10.08353 -10.04946 -9.81465 -9.60141 -9.22654 -4.94787 0.26064 0.29558 0.43717 0.50215 1.29249 1.52479 1.56680 1.69122 1.92216 2.46686 2.60322 2.84503 3.16383 3.37467 3.41618 3.51825 3.56315 3.72881 3.76331 3.77342 3.81259 3.87057 3.87721 3.97212 4.07334 4.14412 4.16055 4.24241 4.28935 4.31552 4.39741 4.44654 4.46904 4.54345 4.64059 4.65077 4.66410 4.70458 4.75253 4.76038 4.84058 4.89306 4.95732 5.00402 5.09154 5.15599 5.17005 5.19044 5.21879 5.26830 5.36452 5.48925 5.60378 5.65415 5.68422 5.69904 6.11516 6.29913 6.43509 6.60207 6.87040 7.13158 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.754 3.246 4 C -0.124 4.124 5 C -0.059 4.059 6 C -0.158 4.158 7 C 0.123 3.877 8 O -0.320 6.320 9 C 0.074 3.926 10 C -0.132 4.132 11 C 0.518 3.482 12 O -0.584 6.584 13 N -0.709 5.709 14 C 0.148 3.852 15 C -0.046 4.046 16 C -0.070 4.070 17 C -0.122 4.122 18 C -0.123 4.123 19 C -0.134 4.134 20 C -0.130 4.130 21 C -0.126 4.126 22 C -0.124 4.124 23 C 0.078 3.922 24 H 0.086 0.914 25 O -0.567 6.567 26 C -0.148 4.148 27 C -0.210 4.210 28 C -0.083 4.083 29 H 0.394 0.606 30 H 0.098 0.902 31 H -0.283 1.283 32 H -0.303 1.303 33 H 0.144 0.856 34 H 0.145 0.855 35 H 0.063 0.937 36 H 0.068 0.932 37 H 0.125 0.875 38 H 0.125 0.875 39 H 0.413 0.587 40 H 0.080 0.920 41 H 0.052 0.948 42 H 0.142 0.858 43 H 0.138 0.862 44 H 0.131 0.869 45 H 0.127 0.873 46 H 0.117 0.883 47 H 0.077 0.923 48 H 0.117 0.883 49 H 0.396 0.604 50 H 0.102 0.898 51 H 0.076 0.924 52 H 0.139 0.861 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.409 -4.458 2.899 6.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.186 4.186 3 Si 0.660 3.340 4 C -0.124 4.124 5 C -0.077 4.077 6 C -0.176 4.176 7 C 0.077 3.923 8 O -0.233 6.233 9 C -0.001 4.001 10 C -0.171 4.171 11 C 0.305 3.695 12 O -0.465 6.465 13 N -0.360 5.360 14 C 0.024 3.976 15 C -0.046 4.046 16 C -0.070 4.070 17 C -0.139 4.139 18 C -0.141 4.141 19 C -0.152 4.152 20 C -0.148 4.148 21 C -0.144 4.144 22 C -0.161 4.161 23 C 0.019 3.981 24 H 0.104 0.896 25 O -0.376 6.376 26 C -0.186 4.186 27 C -0.229 4.229 28 C -0.101 4.101 29 H 0.245 0.755 30 H 0.116 0.884 31 H -0.210 1.210 32 H -0.231 1.231 33 H 0.162 0.838 34 H 0.163 0.837 35 H 0.081 0.919 36 H 0.086 0.914 37 H 0.143 0.857 38 H 0.143 0.857 39 H 0.249 0.751 40 H 0.098 0.902 41 H 0.070 0.930 42 H 0.160 0.840 43 H 0.156 0.844 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.135 0.865 47 H 0.096 0.904 48 H 0.135 0.865 49 H 0.246 0.754 50 H 0.120 0.880 51 H 0.094 0.906 52 H 0.157 0.843 53 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 3.264 -3.724 2.921 5.750 hybrid contribution -0.703 0.383 0.052 0.803 sum 2.561 -3.341 2.973 5.154 Atomic orbital electron populations 1.86552 1.18635 1.80595 1.51066 1.24869 0.83914 1.11304 0.98494 0.94214 0.90628 0.72821 0.76305 1.19404 1.01544 0.94643 0.96833 1.21016 0.96355 0.93686 0.96652 1.20683 1.01682 1.01496 0.93736 1.19179 0.94683 0.91266 0.87145 1.85951 1.69244 1.38739 1.29411 1.22428 0.95820 0.93531 0.88342 1.21424 1.02917 0.99146 0.93652 1.20609 0.78850 0.87552 0.82459 1.90727 1.60037 1.18024 1.77693 1.45731 1.55806 1.14020 1.20475 1.21128 0.95446 0.93162 0.87857 1.20813 0.95024 0.95078 0.93696 1.19635 0.94331 0.94011 0.99050 1.21296 1.00413 0.92055 1.00177 1.21441 0.93701 1.00662 0.98307 1.21435 0.97881 0.95932 0.99984 1.21362 0.99835 0.93754 0.99818 1.21095 0.94010 0.99784 0.99512 1.23285 0.98374 0.97385 0.97059 1.22752 0.88861 0.88409 0.98041 0.89637 1.86441 1.64612 1.27799 1.58730 1.23702 0.98344 1.01170 0.95432 1.21389 1.06682 0.94036 1.00801 1.20972 0.96617 0.99822 0.92669 0.75534 0.88412 1.20957 1.23098 0.83812 0.83676 0.91856 0.91405 0.85666 0.85670 0.75103 0.90180 0.92982 0.83982 0.84416 0.85102 0.85476 0.86490 0.90384 0.86474 0.75353 0.88004 0.90576 0.84317 0.84384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.17 12.81 -148.98 -1.91 -4.08 16 2 C -0.08 -0.11 2.79 71.24 0.20 0.09 16 3 Si 0.75 0.32 29.85 68.60 2.05 2.37 16 4 C -0.12 -0.63 5.38 -19.85 -0.11 -0.73 16 5 C -0.06 -0.27 9.68 22.25 0.22 -0.06 16 6 C -0.16 -0.82 9.99 22.36 0.22 -0.60 16 7 C 0.12 0.84 6.69 22.51 0.15 1.00 16 8 O -0.32 -1.83 10.14 -92.37 -0.94 -2.76 16 9 C 0.07 0.26 4.03 71.98 0.29 0.56 16 10 C -0.13 0.15 6.07 29.85 0.18 0.33 16 11 C 0.52 2.21 7.83 87.66 0.69 2.90 16 12 O -0.58 -7.64 15.98 -3.03 -0.05 -7.69 16 13 N -0.71 -0.06 5.18 -463.05 -2.40 -2.46 16 14 C 0.15 0.27 4.82 86.38 0.42 0.69 16 15 C -0.05 0.14 0.62 -52.40 -0.03 0.10 16 16 C -0.07 0.12 4.63 -19.87 -0.09 0.03 16 17 C -0.12 0.41 9.05 22.27 0.20 0.62 16 18 C -0.12 0.29 10.05 22.27 0.22 0.51 16 19 C -0.13 0.09 10.05 22.27 0.22 0.31 16 20 C -0.13 -0.07 10.05 22.27 0.22 0.15 16 21 C -0.13 -0.09 9.34 22.27 0.21 0.12 16 22 C -0.12 0.65 5.94 31.12 0.18 0.84 16 23 C 0.08 -0.37 5.28 31.18 0.16 -0.20 16 24 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 25 O -0.57 0.95 11.52 -148.98 -1.72 -0.77 16 26 C -0.15 0.63 6.96 31.18 0.22 0.85 16 27 C -0.21 -1.32 9.04 22.37 0.20 -1.11 16 28 C -0.08 -0.44 8.66 22.25 0.19 -0.25 16 29 H 0.39 -1.73 8.74 -74.06 -0.65 -2.37 16 30 H 0.10 -0.31 7.96 -2.39 -0.02 -0.33 16 31 H -0.28 -1.08 7.11 99.48 0.71 -0.38 16 32 H -0.30 -2.50 7.05 99.48 0.70 -1.80 16 33 H 0.14 0.19 8.06 -2.91 -0.02 0.17 16 34 H 0.15 0.29 8.06 -2.91 -0.02 0.26 16 35 H 0.06 0.34 7.61 -2.38 -0.02 0.32 16 36 H 0.07 0.31 7.63 -2.39 -0.02 0.29 16 37 H 0.13 -0.60 8.14 -2.39 -0.02 -0.62 16 38 H 0.13 -0.60 8.14 -2.39 -0.02 -0.61 16 39 H 0.41 -1.99 8.13 -92.70 -0.75 -2.74 16 40 H 0.08 0.42 5.95 -2.38 -0.01 0.41 16 41 H 0.05 0.28 7.97 -2.39 -0.02 0.26 16 42 H 0.14 -1.10 6.42 -2.91 -0.02 -1.12 16 43 H 0.14 -0.82 8.06 -2.91 -0.02 -0.84 16 44 H 0.13 -0.45 8.06 -2.91 -0.02 -0.47 16 45 H 0.13 -0.20 8.06 -2.91 -0.02 -0.23 16 46 H 0.12 0.04 8.06 -2.91 -0.02 0.02 16 47 H 0.08 -0.31 7.83 -2.38 -0.02 -0.33 16 48 H 0.12 -0.96 6.79 -2.39 -0.02 -0.98 16 49 H 0.40 -3.42 9.12 -74.06 -0.68 -4.10 16 50 H 0.10 -0.52 8.09 -2.39 -0.02 -0.54 16 51 H 0.08 -0.25 8.10 -2.39 -0.02 -0.27 16 52 H 0.14 0.63 6.30 -2.91 -0.02 0.61 16 53 H 0.14 0.30 4.86 -2.91 -0.01 0.28 16 Total: 0.00 -23.14 430.84 -1.87 -25.01 By element: Atomic # 1 Polarization: -14.66 SS G_CDS: -1.08 Total: -15.74 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 4.17 Total: 6.13 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -2.40 Total: -2.46 kcal Atomic # 8 Polarization: -10.69 SS G_CDS: -4.61 Total: -15.30 kcal Atomic # 14 Polarization: 0.32 SS G_CDS: 2.05 Total: 2.37 kcal Total: -23.14 -1.87 -25.01 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4549602.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.153 kcal (2) G-P(sol) polarization free energy of solvation -23.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.006 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds