Wall clock time and date at job start Sat Mar 6 2021 23:25:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.47293 * 2 1 4 4 C 1.50705 * 109.47205 * 240.00212 * 2 1 3 5 5 C 1.38239 * 119.97233 * 120.02250 * 4 2 1 6 6 C 1.38289 * 120.11433 * 180.02562 * 5 4 2 7 7 C 1.38132 * 120.05036 * 359.67961 * 6 5 4 8 8 C 1.38752 * 119.94199 * 0.59668 * 7 6 5 9 9 O 1.35900 * 120.05232 * 179.70163 * 8 7 6 10 10 C 1.42903 * 116.99971 * 359.72045 * 9 8 7 11 11 C 1.53006 * 109.46869 * 180.02562 * 10 9 8 12 12 C 1.50700 * 109.46826 * 180.02562 * 11 10 9 13 13 O 1.21281 * 120.00027 * 0.02562 * 12 11 10 14 14 N 1.34772 * 119.99735 * 180.02562 * 12 11 10 15 15 C 1.46502 * 120.00281 * 180.02562 * 14 12 11 16 16 C 1.52995 * 109.47698 * 174.67139 * 15 14 12 17 17 C 1.50702 * 112.84897 * 305.88532 * 16 15 14 18 18 C 1.38235 * 119.99932 * 102.95323 * 17 16 15 19 19 C 1.38239 * 119.99533 * 179.76550 * 18 17 16 20 20 C 1.38235 * 120.00041 * 0.48529 * 19 18 17 21 21 C 1.38233 * 120.00060 * 359.79217 * 20 19 18 22 22 C 1.38232 * 119.99667 * 283.22836 * 17 16 15 23 23 C 1.53775 * 113.61686 * 174.68220 * 16 15 14 24 24 C 1.53773 * 87.08499 * 270.88716 * 23 16 15 25 25 H 1.09006 * 113.61235 * 220.02062 * 24 23 16 26 26 O 1.42891 * 113.61723 * 89.11542 * 24 23 16 27 27 C 1.53783 * 87.08239 * 334.56619 * 24 23 16 28 28 C 1.38162 * 119.97254 * 299.99923 * 4 2 1 29 29 H 0.96704 * 113.99868 * 59.99284 * 1 2 3 30 30 H 1.08998 * 109.47281 * 120.00070 * 2 1 3 31 31 H 1.48492 * 110.00445 * 298.68278 * 3 2 1 32 32 H 1.48508 * 109.99904 * 60.00235 * 3 2 1 33 33 H 1.08007 * 119.94582 * 359.97438 * 5 4 2 34 34 H 1.07992 * 119.97753 * 179.97438 * 6 5 4 35 35 H 1.07997 * 120.02612 * 180.31717 * 7 6 5 36 36 H 1.08999 * 109.47119 * 60.00685 * 10 9 8 37 37 H 1.08992 * 109.47394 * 300.00248 * 10 9 8 38 38 H 1.08999 * 109.46718 * 60.00406 * 11 10 9 39 39 H 1.08992 * 109.47288 * 300.00280 * 11 10 9 40 40 H 0.97003 * 120.00085 * 359.97438 * 14 12 11 41 41 H 1.09004 * 109.47064 * 54.66577 * 15 14 12 42 42 H 1.09010 * 109.46792 * 294.67272 * 15 14 12 43 43 H 1.07996 * 120.00313 * 0.02562 * 18 17 16 44 44 H 1.08001 * 119.99536 * 180.25909 * 19 18 17 45 45 H 1.08003 * 119.99917 * 179.76651 * 20 19 18 46 46 H 1.08002 * 120.00126 * 179.97438 * 21 20 19 47 47 H 1.08005 * 120.00111 * 0.02562 * 22 17 16 48 48 H 1.09001 * 113.61375 * 25.44110 * 23 16 15 49 49 H 1.09005 * 113.61213 * 156.33339 * 23 16 15 50 50 H 0.96703 * 114.00633 * 179.97438 * 26 24 23 51 51 H 1.08999 * 113.61311 * 270.88809 * 27 24 23 52 52 H 1.08999 * 113.69229 * 139.99313 * 27 24 23 53 53 H 1.08010 * 120.02625 * 0.04670 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0381 -2.1398 6 6 3.1886 -0.6869 -3.2702 7 6 2.8620 -2.0110 -3.4900 8 6 2.0593 -2.6862 -2.5817 9 8 1.7316 -3.9872 -2.7988 10 6 2.2434 -4.5957 -3.9862 11 6 1.7719 -6.0495 -4.0581 12 6 2.3121 -6.6914 -5.3100 13 8 3.0064 -6.0495 -6.0695 14 7 2.0238 -7.9788 -5.5854 15 6 2.5495 -8.6031 -6.8021 16 6 2.1894 -10.0900 -6.8089 17 6 2.6352 -10.8058 -5.5599 18 6 1.7152 -11.1181 -4.5765 19 6 2.1233 -11.7790 -3.4330 20 6 3.4532 -12.1185 -3.2684 21 6 4.3741 -11.8011 -4.2491 22 6 3.9651 -11.1449 -5.3950 23 6 2.5836 -10.8134 -8.1074 24 6 1.2004 -10.4213 -8.6530 25 1 0.7231 -11.2073 -9.2384 26 8 1.1821 -9.1513 -9.3076 27 6 0.7259 -10.3677 -7.1912 28 6 1.5972 -2.0331 -1.4486 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5879 2.4586 -1.2241 32 1 1.5615 2.4679 1.2086 33 1 2.9865 0.9959 -1.9676 34 1 3.8092 -0.1595 -3.9793 35 1 3.2273 -2.5188 -4.3703 36 1 3.3329 -4.5672 -3.9684 37 1 1.8799 -4.0526 -4.8585 38 1 0.6824 -6.0775 -4.0761 39 1 2.1350 -6.5928 -3.1858 40 1 1.4689 -8.4923 -4.9777 41 1 3.6335 -8.4915 -6.8285 42 1 2.1131 -8.1195 -7.6762 43 1 0.6769 -10.8496 -4.7035 44 1 1.4038 -12.0267 -2.6666 45 1 3.7727 -12.6315 -2.3732 46 1 5.4132 -12.0660 -4.1203 47 1 4.6847 -10.8965 -6.1611 48 1 3.4115 -10.3411 -8.6362 49 1 2.7162 -11.8884 -7.9853 50 1 0.3149 -8.8993 -9.6534 51 1 0.3507 -11.3209 -6.8187 52 1 0.0539 -9.5362 -6.9790 53 1 0.9756 -2.5578 -0.7381 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_4549614.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:25:30 Heat of formation + Delta-G solvation = -71.354366 kcal Electronic energy + Delta-G solvation = -34512.722934 eV Core-core repulsion = 29896.092162 eV Total energy + Delta-G solvation = -4616.630772 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -41.92928 -41.35708 -40.50794 -39.30086 -39.15535 -37.40158 -36.43517 -35.08360 -33.37833 -32.49393 -31.86724 -31.73347 -30.92793 -28.71682 -27.04261 -26.92444 -25.43295 -24.33439 -23.68777 -23.19929 -22.39187 -22.06114 -21.43065 -19.97963 -19.35953 -18.58241 -18.22051 -17.75158 -17.72714 -17.54434 -17.17846 -17.10612 -16.77343 -16.46671 -16.22884 -16.01009 -15.85918 -15.59962 -15.45221 -15.25752 -14.92820 -14.65068 -14.59161 -14.40239 -14.31575 -14.22630 -14.13482 -13.81365 -13.66068 -13.25616 -13.12501 -13.06844 -12.94171 -12.86822 -12.70601 -12.42237 -12.20240 -12.00648 -11.90657 -11.84965 -11.70498 -11.59038 -11.15018 -11.13896 -10.69891 -10.68122 -10.13278 -9.95201 -9.82665 -9.62745 -9.29407 -4.90210 0.18052 0.37578 0.42158 0.48555 1.29446 1.48820 1.62327 1.67266 1.96401 2.44524 2.64398 2.83442 3.13466 3.39511 3.40745 3.48677 3.53935 3.63196 3.67350 3.75337 3.82259 3.84373 3.89907 4.04803 4.08068 4.12890 4.15456 4.22197 4.25960 4.28304 4.37333 4.43377 4.53609 4.54612 4.60504 4.62699 4.63444 4.70922 4.72834 4.74509 4.83164 4.86815 4.96700 4.99050 5.08753 5.14009 5.16131 5.20993 5.24407 5.34107 5.36437 5.42204 5.59202 5.64290 5.66577 5.68568 6.10055 6.30193 6.40405 6.46754 6.87062 7.09856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.087 4.087 3 Si 0.776 3.224 4 C -0.082 4.082 5 C -0.156 4.156 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.324 6.324 10 C 0.077 3.923 11 C -0.132 4.132 12 C 0.518 3.482 13 O -0.584 6.584 14 N -0.709 5.709 15 C 0.148 3.852 16 C -0.046 4.046 17 C -0.071 4.071 18 C -0.121 4.121 19 C -0.122 4.122 20 C -0.134 4.134 21 C -0.129 4.129 22 C -0.126 4.126 23 C -0.120 4.120 24 C 0.078 3.922 25 H 0.086 0.914 26 O -0.568 6.568 27 C -0.151 4.151 28 C -0.141 4.141 29 H 0.386 0.614 30 H 0.126 0.874 31 H -0.281 1.281 32 H -0.302 1.302 33 H 0.149 0.851 34 H 0.153 0.847 35 H 0.135 0.865 36 H 0.065 0.935 37 H 0.066 0.934 38 H 0.127 0.873 39 H 0.122 0.878 40 H 0.412 0.588 41 H 0.048 0.952 42 H 0.083 0.917 43 H 0.141 0.859 44 H 0.139 0.861 45 H 0.131 0.869 46 H 0.127 0.873 47 H 0.118 0.882 48 H 0.069 0.931 49 H 0.110 0.890 50 H 0.397 0.603 51 H 0.108 0.892 52 H 0.082 0.918 53 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.386 -4.396 -0.326 4.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.195 4.195 3 Si 0.680 3.320 4 C -0.082 4.082 5 C -0.174 4.174 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.071 3.929 9 O -0.238 6.238 10 C 0.001 3.999 11 C -0.172 4.172 12 C 0.305 3.695 13 O -0.464 6.464 14 N -0.361 5.361 15 C 0.025 3.975 16 C -0.047 4.047 17 C -0.071 4.071 18 C -0.139 4.139 19 C -0.140 4.140 20 C -0.152 4.152 21 C -0.147 4.147 22 C -0.144 4.144 23 C -0.158 4.158 24 C 0.019 3.981 25 H 0.104 0.896 26 O -0.377 6.377 27 C -0.188 4.188 28 C -0.160 4.160 29 H 0.236 0.764 30 H 0.143 0.857 31 H -0.208 1.208 32 H -0.230 1.230 33 H 0.166 0.834 34 H 0.170 0.830 35 H 0.153 0.847 36 H 0.083 0.917 37 H 0.084 0.916 38 H 0.145 0.855 39 H 0.140 0.860 40 H 0.249 0.751 41 H 0.067 0.933 42 H 0.101 0.899 43 H 0.159 0.841 44 H 0.157 0.843 45 H 0.149 0.851 46 H 0.145 0.855 47 H 0.136 0.864 48 H 0.088 0.912 49 H 0.128 0.872 50 H 0.247 0.753 51 H 0.126 0.874 52 H 0.101 0.899 53 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.511 -3.603 -0.068 3.640 hybrid contribution -1.473 -0.582 -0.629 1.704 sum -1.984 -4.185 -0.696 4.684 Atomic orbital electron populations 1.86568 1.18432 1.80467 1.50137 1.25350 0.83536 1.12268 0.98327 0.93892 0.90315 0.71328 0.76425 1.20175 0.97641 0.93454 0.96928 1.21175 1.00233 1.00896 0.95049 1.21247 0.97647 0.93319 0.97085 1.21554 1.03076 0.97137 1.01242 1.19154 0.95296 0.83475 0.94992 1.85951 1.71380 1.22895 1.43606 1.22402 0.98910 0.93008 0.85580 1.21425 1.04907 0.94130 0.96733 1.20603 0.79731 0.82027 0.87101 1.90735 1.40203 1.63724 1.51733 1.45778 1.53209 1.11557 1.25572 1.21114 0.98180 0.90759 0.87477 1.20827 0.98426 0.92715 0.92717 1.19629 0.93522 0.98608 0.95316 1.21245 1.00071 0.99269 0.93334 1.21443 0.96243 0.98133 0.98165 1.21439 0.93899 1.00317 0.99508 1.21367 1.00381 0.98766 0.94165 1.21117 0.95907 0.99269 0.98112 1.23156 0.97415 1.01288 0.93895 1.22702 0.97101 0.86075 0.92214 0.89602 1.86437 1.38215 1.36350 1.76669 1.23756 0.94386 1.03828 0.96847 1.20319 1.03805 0.94686 0.97148 0.76445 0.85652 1.20778 1.23006 0.83383 0.82954 0.84712 0.91701 0.91617 0.85526 0.85968 0.75119 0.93346 0.89921 0.84092 0.84342 0.85083 0.85456 0.86440 0.91241 0.87187 0.75272 0.87375 0.89926 0.85403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.22 12.77 -148.98 -1.90 -4.12 16 2 C -0.09 -0.08 2.82 71.24 0.20 0.12 16 3 Si 0.78 -1.12 29.79 68.60 2.04 0.92 16 4 C -0.08 -0.21 5.39 -19.88 -0.11 -0.31 16 5 C -0.16 -0.06 8.67 22.28 0.19 0.13 16 6 C -0.08 -0.08 10.04 22.26 0.22 0.15 16 7 C -0.21 -0.88 9.04 22.37 0.20 -0.68 16 8 C 0.12 0.74 6.69 22.50 0.15 0.89 16 9 O -0.32 -1.93 10.14 -92.43 -0.94 -2.87 16 10 C 0.08 0.25 4.03 71.98 0.29 0.54 16 11 C -0.13 0.17 6.07 29.85 0.18 0.35 16 12 C 0.52 2.05 7.83 87.66 0.69 2.73 16 13 O -0.58 -7.52 15.98 -3.03 -0.05 -7.57 16 14 N -0.71 0.19 5.28 -463.05 -2.45 -2.26 16 15 C 0.15 0.31 4.94 86.38 0.43 0.74 16 16 C -0.05 0.13 0.70 -52.40 -0.04 0.09 16 17 C -0.07 0.13 4.25 -19.87 -0.08 0.05 16 18 C -0.12 0.47 8.24 22.27 0.18 0.66 16 19 C -0.12 0.35 10.05 22.27 0.22 0.57 16 20 C -0.13 0.13 10.05 22.27 0.22 0.35 16 21 C -0.13 -0.04 10.05 22.27 0.22 0.18 16 22 C -0.13 -0.08 9.39 22.27 0.21 0.13 16 23 C -0.12 0.30 6.72 31.12 0.21 0.51 16 24 C 0.08 -0.35 5.28 31.12 0.16 -0.18 16 25 H 0.09 -0.61 8.14 -2.38 -0.02 -0.63 16 26 O -0.57 0.89 11.51 -148.98 -1.72 -0.83 16 27 C -0.15 0.96 6.05 31.12 0.19 1.15 16 28 C -0.14 -0.80 9.55 22.36 0.21 -0.59 16 29 H 0.39 -0.59 8.70 -74.05 -0.64 -1.24 16 30 H 0.13 -0.07 7.96 -2.39 -0.02 -0.09 16 31 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 32 H -0.30 -1.83 7.11 99.48 0.71 -1.13 16 33 H 0.15 -0.63 4.87 -2.91 -0.01 -0.64 16 34 H 0.15 -0.59 8.06 -2.91 -0.02 -0.61 16 35 H 0.14 0.41 6.30 -2.91 -0.02 0.39 16 36 H 0.06 0.30 7.61 -2.39 -0.02 0.28 16 37 H 0.07 0.29 7.63 -2.39 -0.02 0.27 16 38 H 0.13 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.12 -0.52 8.14 -2.39 -0.02 -0.54 16 40 H 0.41 -2.08 7.37 -92.71 -0.68 -2.77 16 41 H 0.05 0.32 8.13 -2.38 -0.02 0.30 16 42 H 0.08 0.43 5.95 -2.38 -0.01 0.42 16 43 H 0.14 -1.16 7.02 -2.91 -0.02 -1.18 16 44 H 0.14 -0.89 8.06 -2.91 -0.02 -0.92 16 45 H 0.13 -0.48 8.06 -2.91 -0.02 -0.50 16 46 H 0.13 -0.23 8.06 -2.91 -0.02 -0.25 16 47 H 0.12 0.04 8.04 -2.91 -0.02 0.02 16 48 H 0.07 0.03 8.10 -2.39 -0.02 0.01 16 49 H 0.11 -0.47 8.09 -2.38 -0.02 -0.49 16 50 H 0.40 -3.58 9.12 -74.06 -0.68 -4.26 16 51 H 0.11 -0.91 7.45 -2.39 -0.02 -0.92 16 52 H 0.08 -0.56 8.10 -2.39 -0.02 -0.58 16 53 H 0.13 0.77 8.06 -2.91 -0.02 0.75 16 Total: 0.00 -22.19 430.67 -1.85 -24.04 By element: Atomic # 1 Polarization: -13.89 SS G_CDS: -1.01 Total: -14.89 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 4.17 Total: 7.58 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -2.45 Total: -2.26 kcal Atomic # 8 Polarization: -10.79 SS G_CDS: -4.60 Total: -15.39 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: 2.04 Total: 0.92 kcal Total: -22.19 -1.85 -24.04 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4549614.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.315 kcal (2) G-P(sol) polarization free energy of solvation -22.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.039 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds