Wall clock time and date at job start Sat Mar 6 2021 23:26:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47730 * 2 1 4 4 C 1.50698 * 109.47327 * 120.00339 * 2 1 3 5 5 C 1.38267 * 119.94372 * 64.99212 * 4 2 1 6 6 C 1.38152 * 120.05735 * 180.02562 * 5 4 2 7 7 C 1.38737 * 119.94089 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05070 * 180.02562 * 7 6 5 9 9 C 1.42901 * 116.99695 * 180.02562 * 8 7 6 10 10 F 1.39901 * 109.46995 * 59.99436 * 9 8 7 11 11 F 1.39903 * 109.46870 * 299.99654 * 9 8 7 12 12 C 1.50693 * 109.47365 * 179.97438 * 9 8 7 13 13 O 1.21285 * 119.99639 * 0.02562 * 12 9 8 14 14 N 1.34775 * 120.00622 * 179.97438 * 12 9 8 15 15 C 1.46493 * 120.00414 * 180.02562 * 14 12 9 16 16 C 1.53001 * 109.47221 * 185.39076 * 15 14 12 17 17 C 1.50701 * 112.85111 * 54.23551 * 16 15 14 18 18 C 1.38231 * 119.99781 * 76.65613 * 17 16 15 19 19 C 1.38245 * 119.99799 * 179.74769 * 18 17 16 20 20 C 1.38234 * 119.99541 * 0.54667 * 19 18 17 21 21 C 1.38236 * 120.00290 * 359.71129 * 20 19 18 22 22 C 1.38231 * 120.00055 * 256.93308 * 17 16 15 23 23 C 1.53782 * 113.69144 * 282.96744 * 16 15 14 24 24 C 1.53776 * 87.08245 * 270.87305 * 23 16 15 25 25 H 1.09001 * 113.69089 * 220.00797 * 24 23 16 26 26 O 1.42907 * 113.61678 * 89.11387 * 24 23 16 27 27 C 1.53779 * 87.08299 * 334.56671 * 24 23 16 28 28 C 1.38727 * 119.88936 * 0.27980 * 7 6 5 29 29 C 1.38154 * 119.94483 * 359.42510 * 28 7 6 30 30 H 0.96701 * 113.99993 * 300.00264 * 1 2 3 31 31 H 1.09003 * 109.47287 * 239.99859 * 2 1 3 32 32 H 1.48504 * 109.99867 * 300.00249 * 3 2 1 33 33 H 1.48504 * 109.99932 * 61.31989 * 3 2 1 34 34 H 1.07998 * 119.97301 * 359.97438 * 5 4 2 35 35 H 1.07993 * 120.02937 * 179.97438 * 6 5 4 36 36 H 0.97003 * 119.99607 * 0.02562 * 14 12 9 37 37 H 1.09007 * 109.47181 * 65.39108 * 15 14 12 38 38 H 1.08998 * 109.47195 * 305.39371 * 15 14 12 39 39 H 1.07994 * 120.00185 * 0.02562 * 18 17 16 40 40 H 1.07997 * 119.99934 * 180.27412 * 19 18 17 41 41 H 1.07999 * 119.99714 * 179.72544 * 20 19 18 42 42 H 1.08001 * 119.99826 * 179.97438 * 21 20 19 43 43 H 1.08006 * 119.99972 * 359.97438 * 22 17 16 44 44 H 1.09001 * 113.61737 * 156.32309 * 23 16 15 45 45 H 1.09001 * 113.61221 * 25.42339 * 23 16 15 46 46 H 0.96702 * 113.99957 * 82.50086 * 26 24 23 47 47 H 1.08999 * 113.61829 * 139.98018 * 27 24 23 48 48 H 1.08998 * 113.61495 * 270.88483 * 27 24 23 49 49 H 1.07999 * 120.02636 * 179.72151 * 28 7 6 50 50 H 1.07997 * 119.96960 * 180.27964 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0606 1.3971 6 6 2.1429 -2.7141 2.5244 7 6 2.8531 -2.0146 3.4894 8 8 3.3061 -2.6554 4.5989 9 6 4.0294 -1.8721 5.5505 10 9 3.2126 -0.8382 6.0205 11 9 5.1650 -1.3287 4.9403 12 6 4.4483 -2.7452 6.7051 13 8 4.1566 -3.9224 6.7122 14 7 5.1479 -2.2182 7.7294 15 6 5.5556 -3.0670 8.8516 16 6 6.2118 -2.2044 9.9315 17 6 5.3413 -1.0559 10.3723 18 6 4.2748 -1.2834 11.2216 19 6 3.4794 -0.2291 11.6301 20 6 3.7439 1.0509 11.1801 21 6 4.8073 1.2776 10.3265 22 6 5.6060 0.2241 9.9226 23 6 7.6554 -1.7912 9.5996 24 6 8.1027 -3.0902 10.2905 25 1 8.9996 -2.9760 10.8993 26 8 8.1692 -4.2135 9.4096 27 6 6.7964 -3.0176 11.0986 28 6 3.0955 -0.6590 3.3222 29 6 2.6396 -0.0113 2.1902 30 1 -0.3933 0.4417 0.7650 31 1 1.7923 -0.5139 -0.8900 32 1 1.5616 2.4678 -1.2085 33 1 1.5881 2.4585 1.2243 34 1 1.1306 -2.6045 0.6459 35 1 1.9490 -3.7685 2.6544 36 1 5.3815 -1.2767 7.7236 37 1 6.2673 -3.8149 8.5017 38 1 4.6798 -3.5654 9.2671 39 1 4.0655 -2.2841 11.5697 40 1 2.6487 -0.4062 12.2972 41 1 3.1198 1.8739 11.4957 42 1 5.0136 2.2776 9.9746 43 1 6.4369 0.4012 9.2557 44 1 7.9807 -0.8878 10.1157 45 1 7.8686 -1.7693 8.5309 46 1 8.9886 -4.2646 8.8986 47 1 6.3160 -3.9857 11.2400 48 1 6.8867 -2.4495 12.0245 49 1 3.6443 -0.1113 4.0741 50 1 2.8320 1.0431 2.0575 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_4549640.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:10 Heat of formation + Delta-G solvation = -154.742172 kcal Electronic energy + Delta-G solvation = -39417.915739 eV Core-core repulsion = 34014.298668 eV Total energy + Delta-G solvation = -5403.617071 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -50.75763 -48.73426 -42.09447 -41.28870 -40.59771 -39.45198 -39.19616 -37.33087 -36.62128 -35.34212 -32.38618 -32.03155 -31.98211 -31.88317 -29.99275 -27.92531 -27.15403 -26.19208 -24.91413 -24.25402 -23.34552 -22.73604 -22.51270 -22.11756 -20.65581 -20.35626 -19.55632 -19.45361 -18.74819 -18.56687 -17.88942 -17.57786 -17.25755 -16.89137 -16.63536 -16.61649 -16.32167 -16.15400 -15.94068 -15.80092 -15.68685 -15.54947 -15.38797 -15.35458 -15.21642 -14.98775 -14.96555 -14.64790 -14.40163 -14.31378 -14.29457 -14.14051 -14.09965 -13.83852 -13.47979 -13.29219 -13.23398 -12.94612 -12.89889 -12.40026 -12.35888 -12.20344 -12.09223 -11.87184 -11.67423 -11.41481 -11.35693 -10.92970 -10.61986 -10.39388 -10.12322 -9.94109 -9.75307 -9.51044 -4.98555 0.10288 0.21632 0.29977 0.37291 0.58812 0.83576 1.25770 1.56511 1.83107 1.93934 2.10410 2.51846 2.70641 2.79241 2.90482 3.19708 3.31271 3.34595 3.37856 3.45412 3.56368 3.57743 3.68346 3.76455 3.77747 3.96668 4.00598 4.12396 4.13703 4.21723 4.24394 4.40962 4.43221 4.47982 4.51366 4.55511 4.56922 4.62925 4.71560 4.78296 4.85478 4.87613 4.89779 4.97540 4.99890 5.01153 5.05161 5.11334 5.39523 5.44390 5.46294 5.51957 5.53672 5.86119 5.93069 5.97117 6.38435 6.50753 6.52110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.071 4.071 3 Si 0.683 3.317 4 C -0.141 4.141 5 C -0.055 4.055 6 C -0.127 4.127 7 C 0.108 3.892 8 O -0.285 6.285 9 C 0.432 3.568 10 F -0.175 7.175 11 F -0.175 7.175 12 C 0.514 3.486 13 O -0.468 6.468 14 N -0.697 5.697 15 C 0.142 3.858 16 C -0.054 4.054 17 C -0.074 4.074 18 C -0.110 4.110 19 C -0.114 4.114 20 C -0.120 4.120 21 C -0.115 4.115 22 C -0.122 4.122 23 C -0.163 4.163 24 C 0.079 3.921 25 H 0.075 0.925 26 O -0.548 6.548 27 C -0.112 4.112 28 C -0.187 4.187 29 C -0.079 4.079 30 H 0.376 0.624 31 H 0.120 0.880 32 H -0.256 1.256 33 H -0.260 1.260 34 H 0.140 0.860 35 H 0.141 0.859 36 H 0.407 0.593 37 H 0.106 0.894 38 H 0.081 0.919 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.098 0.902 45 H 0.079 0.921 46 H 0.384 0.616 47 H 0.085 0.915 48 H 0.104 0.896 49 H 0.136 0.864 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.344 3.309 3.154 7.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.181 4.181 3 Si 0.585 3.415 4 C -0.141 4.141 5 C -0.073 4.073 6 C -0.145 4.145 7 C 0.065 3.935 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.156 7.156 11 F -0.157 7.157 12 C 0.292 3.708 13 O -0.339 6.339 14 N -0.351 5.351 15 C 0.020 3.980 16 C -0.054 4.054 17 C -0.074 4.074 18 C -0.128 4.128 19 C -0.132 4.132 20 C -0.138 4.138 21 C -0.133 4.133 22 C -0.140 4.140 23 C -0.201 4.201 24 C 0.020 3.980 25 H 0.092 0.908 26 O -0.354 6.354 27 C -0.150 4.150 28 C -0.206 4.206 29 C -0.096 4.096 30 H 0.224 0.776 31 H 0.138 0.862 32 H -0.181 1.181 33 H -0.185 1.185 34 H 0.157 0.843 35 H 0.159 0.841 36 H 0.243 0.757 37 H 0.123 0.877 38 H 0.099 0.901 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.117 0.883 45 H 0.098 0.902 46 H 0.233 0.767 47 H 0.104 0.896 48 H 0.123 0.877 49 H 0.153 0.847 50 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.407 2.669 2.916 5.920 hybrid contribution -0.413 0.999 0.388 1.148 sum 3.994 3.668 3.304 6.350 Atomic orbital electron populations 1.86607 1.17630 1.79949 1.49340 1.24978 0.83992 1.10911 0.98248 0.95006 0.91662 0.74570 0.80274 1.20297 1.01306 0.95060 0.97484 1.20900 0.96710 0.93497 0.96222 1.20545 0.99916 1.01141 0.92911 1.19000 0.96505 0.91576 0.86412 1.86679 1.67901 1.36275 1.29327 1.21863 0.76479 0.79561 0.86701 1.93193 1.73218 1.60655 1.88581 1.93185 1.51554 1.86642 1.84273 1.19241 0.80961 0.87942 0.82692 1.90880 1.52211 1.14242 1.76565 1.45721 1.54775 1.14428 1.20173 1.21492 1.00476 0.92062 0.83921 1.20936 0.93629 0.94331 0.96498 1.19565 0.96184 0.93684 0.97965 1.21000 0.94768 0.99288 0.97709 1.21211 0.99448 0.92851 0.99723 1.21233 0.97681 0.97182 0.97707 1.21182 0.95306 0.99064 0.97737 1.21037 1.00066 0.92218 1.00718 1.23826 0.94598 0.99330 1.02350 1.22658 0.98107 0.85591 0.91645 0.90751 1.86454 1.44522 1.46140 1.58334 1.23097 0.94732 1.00855 0.96314 1.21470 1.05166 0.93097 1.00818 1.20845 0.96411 0.99679 0.92689 0.77601 0.86218 1.18058 1.18482 0.84268 0.84117 0.75718 0.87655 0.90102 0.85984 0.85873 0.85965 0.85864 0.86011 0.88345 0.90245 0.76709 0.89602 0.87738 0.84679 0.84850 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.68 12.83 -35.23 -0.45 -1.13 16 2 C -0.07 0.01 2.80 36.00 0.10 0.11 16 3 Si 0.68 -0.59 29.88 -169.99 -5.08 -5.67 16 4 C -0.14 -0.08 5.35 -104.60 -0.56 -0.64 16 5 C -0.06 -0.05 9.68 -39.60 -0.38 -0.43 16 6 C -0.13 -0.25 9.99 -39.43 -0.39 -0.64 16 7 C 0.11 0.34 6.48 -39.22 -0.25 0.09 16 8 O -0.29 -1.23 9.60 -39.34 -0.38 -1.61 16 9 C 0.43 1.14 2.05 36.00 0.07 1.21 16 10 F -0.18 -0.39 15.28 2.25 0.03 -0.36 16 11 F -0.18 -0.28 15.31 2.25 0.03 -0.25 16 12 C 0.51 1.52 7.34 -10.99 -0.08 1.44 16 13 O -0.47 -2.90 16.49 -14.36 -0.24 -3.14 16 14 N -0.70 -0.09 5.28 -60.30 -0.32 -0.40 16 15 C 0.14 -0.03 4.95 -4.04 -0.02 -0.05 16 16 C -0.05 0.11 0.70 -154.84 -0.11 0.00 16 17 C -0.07 0.09 4.25 -104.63 -0.45 -0.36 16 18 C -0.11 0.05 9.39 -39.58 -0.37 -0.32 16 19 C -0.11 0.04 10.05 -39.58 -0.40 -0.36 16 20 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 21 C -0.11 0.11 10.05 -39.58 -0.40 -0.29 16 22 C -0.12 0.18 8.25 -39.59 -0.33 -0.15 16 23 C -0.16 0.53 6.05 -25.92 -0.16 0.38 16 24 C 0.08 -0.22 5.28 -25.92 -0.14 -0.36 16 25 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 26 O -0.55 0.97 11.52 -35.23 -0.41 0.57 16 27 C -0.11 0.27 6.73 -25.92 -0.17 0.09 16 28 C -0.19 -0.36 8.26 -39.43 -0.33 -0.69 16 29 C -0.08 -0.05 8.66 -39.60 -0.34 -0.39 16 30 H 0.38 -0.53 8.70 45.56 0.40 -0.13 16 31 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 33 H -0.26 -0.26 7.01 56.52 0.40 0.14 16 34 H 0.14 -0.05 8.06 -52.49 -0.42 -0.47 16 35 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 36 H 0.41 -0.60 7.39 -40.82 -0.30 -0.90 16 37 H 0.11 0.08 5.95 -51.92 -0.31 -0.23 16 38 H 0.08 0.06 8.13 -51.93 -0.42 -0.36 16 39 H 0.12 -0.17 8.04 -52.49 -0.42 -0.59 16 40 H 0.12 -0.19 8.06 -52.49 -0.42 -0.62 16 41 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 42 H 0.12 -0.30 8.06 -52.49 -0.42 -0.72 16 43 H 0.12 -0.38 7.01 -52.48 -0.37 -0.75 16 44 H 0.10 -0.37 7.43 -51.93 -0.39 -0.76 16 45 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 46 H 0.38 -2.01 9.12 45.56 0.42 -1.60 16 47 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 48 H 0.10 -0.31 8.09 -51.93 -0.42 -0.73 16 49 H 0.14 0.16 5.10 -52.49 -0.27 -0.10 16 50 H 0.13 -0.17 4.84 -52.49 -0.25 -0.42 16 LS Contribution 419.05 15.07 6.31 6.31 Total: 0.00 -8.34 419.05 -10.92 -19.26 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -5.33 Total: -11.89 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: -5.10 Total: -1.70 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.32 Total: -0.40 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -1.47 Total: -5.31 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.07 Total: -0.60 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.08 Total: -5.67 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -8.34 -10.92 -19.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4549640.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.483 kcal (2) G-P(sol) polarization free energy of solvation -8.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds