Wall clock time and date at job start Sat Mar 6 2021 23:26:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86305 * 109.47165 * 2 1 4 4 C 1.50698 * 109.47391 * 120.00314 * 2 1 3 5 5 C 1.38251 * 119.97128 * 245.00207 * 4 2 1 6 6 C 1.38281 * 120.11001 * 180.02562 * 5 4 2 7 7 C 1.38123 * 120.06236 * 359.97438 * 6 5 4 8 8 C 1.38758 * 119.93754 * 359.97438 * 7 6 5 9 9 O 1.35902 * 120.05337 * 180.02562 * 8 7 6 10 10 C 1.42905 * 117.00004 * 0.02562 * 9 8 7 11 11 C 1.50698 * 109.47293 * 179.97438 * 10 9 8 12 12 O 1.21286 * 119.99871 * 359.97438 * 11 10 9 13 13 N 1.34766 * 120.00115 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99948 * 179.72049 * 13 11 10 15 15 C 1.53003 * 109.47403 * 174.70037 * 14 13 11 16 16 C 1.50698 * 112.85054 * 72.05689 * 15 14 13 17 17 C 1.38231 * 120.00135 * 245.66551 * 16 15 14 18 18 C 1.38238 * 119.99775 * 179.76158 * 17 16 15 19 19 C 1.38234 * 119.99911 * 0.51450 * 18 17 16 20 20 C 1.38233 * 120.00096 * 359.73523 * 19 18 17 21 21 C 1.38232 * 119.99645 * 65.93692 * 16 15 14 22 22 C 1.53788 * 113.61247 * 300.86549 * 15 14 13 23 23 C 1.53777 * 87.07974 * 270.88262 * 22 15 14 24 24 H 1.09010 * 113.61220 * 220.02152 * 23 22 15 25 25 O 1.42893 * 113.61799 * 89.20026 * 23 22 15 26 26 C 1.53781 * 87.08452 * 334.56621 * 23 22 15 27 27 C 1.38160 * 119.97623 * 65.24861 * 4 2 1 28 28 H 0.96705 * 114.00035 * 299.99963 * 1 2 3 29 29 H 1.09005 * 109.47151 * 240.00248 * 2 1 3 30 30 H 1.48497 * 109.99742 * 299.99737 * 3 2 1 31 31 H 1.48490 * 109.99799 * 61.32016 * 3 2 1 32 32 H 1.07997 * 119.94150 * 359.97438 * 5 4 2 33 33 H 1.08010 * 119.96935 * 179.97438 * 6 5 4 34 34 H 1.08000 * 120.03242 * 179.97438 * 7 6 5 35 35 H 1.08999 * 109.47109 * 59.99891 * 10 9 8 36 36 H 1.08995 * 109.47077 * 299.99699 * 10 9 8 37 37 H 0.96998 * 120.00480 * 0.02562 * 13 11 10 38 38 H 1.08995 * 109.47444 * 294.70357 * 14 13 11 39 39 H 1.09000 * 109.46974 * 54.70552 * 14 13 11 40 40 H 1.08004 * 120.00481 * 0.02562 * 17 16 15 41 41 H 1.08002 * 120.00025 * 180.22675 * 18 17 16 42 42 H 1.08000 * 119.99906 * 179.72186 * 19 18 17 43 43 H 1.08000 * 120.00106 * 179.97438 * 20 19 18 44 44 H 1.08001 * 120.00416 * 0.02562 * 21 16 15 45 45 H 1.08996 * 113.61479 * 25.43357 * 22 15 14 46 46 H 1.08998 * 113.61514 * 156.33394 * 22 15 14 47 47 H 0.96701 * 114.00279 * 179.97438 * 25 23 22 48 48 H 1.09002 * 113.61698 * 270.88930 * 26 23 22 49 49 H 1.08999 * 113.61416 * 139.97686 * 26 23 22 50 50 H 1.07999 * 120.02973 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6387 -0.0117 2.1909 6 6 3.1015 -0.6609 3.3208 7 6 2.8576 -2.0095 3.4927 8 6 2.1469 -2.7128 2.5306 9 8 1.9050 -4.0396 2.6976 10 6 2.4114 -4.6466 3.8881 11 6 2.0486 -6.1092 3.8998 12 8 1.4180 -6.5849 2.9794 13 7 2.4240 -6.8883 4.9333 14 6 2.0660 -8.3089 4.9476 15 6 2.7194 -8.9875 6.1532 16 6 2.0802 -8.5986 7.4613 17 6 2.8003 -7.8769 8.3948 18 6 2.2123 -7.5158 9.5926 19 6 0.9077 -7.8857 9.8613 20 6 0.1894 -8.6118 8.9300 21 6 0.7757 -8.9683 7.7299 22 6 4.2537 -8.8830 6.1621 23 6 4.2689 -10.1894 5.3511 24 1 5.0576 -10.8799 5.6503 25 8 4.2159 -9.9865 3.9377 26 6 2.9023 -10.5048 5.9818 27 6 1.6891 -2.0606 1.3952 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4678 -1.2085 31 1 1.5879 2.4585 1.2242 32 1 2.8309 1.0427 2.0582 33 1 3.6543 -0.1128 4.0696 34 1 3.2196 -2.5161 4.3751 35 1 1.9753 -4.1575 4.7591 36 1 3.4958 -4.5407 3.9169 37 1 2.9273 -6.5077 5.6700 38 1 0.9829 -8.4100 5.0166 39 1 2.4172 -8.7813 4.0302 40 1 3.8209 -7.5913 8.1866 41 1 2.7737 -6.9488 10.3205 42 1 0.4498 -7.6075 10.7991 43 1 -0.8297 -8.9011 9.1401 44 1 0.2146 -9.5363 7.0026 45 1 4.6360 -8.0231 5.6122 46 1 4.6922 -8.9805 7.1553 47 1 4.2255 -10.8046 3.4222 48 1 2.9713 -11.0456 6.9257 49 1 2.1936 -10.9541 5.2861 50 1 1.1402 -2.6071 0.6425 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13154426_4860298.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:20 Heat of formation + Delta-G solvation = -59.832519 kcal Electronic energy + Delta-G solvation = -32836.314498 eV Core-core repulsion = 28375.720970 eV Total energy + Delta-G solvation = -4460.593528 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.02466 -41.38517 -40.23881 -39.40897 -38.85964 -37.26956 -36.44490 -34.99605 -32.48721 -32.06696 -31.85366 -31.68643 -30.00004 -27.92394 -27.06543 -26.68111 -24.73839 -23.66767 -23.33113 -22.60829 -22.37071 -21.43086 -20.06611 -19.30724 -18.74699 -18.45977 -17.82764 -17.72258 -17.42210 -17.24508 -16.92980 -16.57295 -16.51503 -16.14278 -15.93380 -15.76908 -15.60380 -15.30060 -15.28378 -14.88846 -14.63955 -14.51815 -14.27886 -14.12737 -14.08286 -13.86657 -13.74098 -13.39845 -13.25236 -13.14347 -12.97030 -12.83503 -12.54493 -12.35280 -12.11648 -11.99789 -11.95236 -11.73794 -11.54748 -11.39605 -10.86503 -10.79900 -10.59534 -10.03000 -9.93097 -9.90950 -9.70477 -9.24338 -4.93164 0.21585 0.33575 0.40115 0.42374 1.27928 1.52096 1.60102 1.62175 1.98742 2.59035 2.67856 2.73936 2.94714 3.22513 3.37334 3.42448 3.51774 3.59560 3.64892 3.65339 3.77724 3.88959 3.91023 3.93738 4.00216 4.02808 4.03610 4.14524 4.20862 4.26471 4.38372 4.48005 4.52389 4.56323 4.56505 4.59761 4.65968 4.66707 4.80809 4.91123 4.92472 4.98472 5.02756 5.05438 5.11206 5.25483 5.35626 5.36884 5.45389 5.49225 5.54977 5.57911 5.67032 5.99367 6.29405 6.44138 6.45268 6.57440 7.19026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.078 4.078 3 Si 0.692 3.308 4 C -0.078 4.078 5 C -0.156 4.156 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.130 3.870 9 O -0.287 6.287 10 C 0.041 3.959 11 C 0.516 3.484 12 O -0.512 6.512 13 N -0.720 5.720 14 C 0.147 3.853 15 C -0.052 4.052 16 C -0.070 4.070 17 C -0.121 4.121 18 C -0.117 4.117 19 C -0.122 4.122 20 C -0.115 4.115 21 C -0.111 4.111 22 C -0.127 4.127 23 C 0.080 3.920 24 H 0.072 0.928 25 O -0.546 6.546 26 C -0.151 4.151 27 C -0.121 4.121 28 H 0.376 0.624 29 H 0.120 0.880 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.130 0.870 35 H 0.093 0.907 36 H 0.094 0.906 37 H 0.400 0.600 38 H 0.067 0.933 39 H 0.098 0.902 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.082 0.918 46 H 0.102 0.898 47 H 0.384 0.616 48 H 0.096 0.904 49 H 0.080 0.920 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.565 -1.001 6.325 8.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.174 4.174 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.037 4.037 11 C 0.300 3.700 12 O -0.386 6.386 13 N -0.373 5.373 14 C 0.024 3.976 15 C -0.052 4.052 16 C -0.070 4.070 17 C -0.139 4.139 18 C -0.135 4.135 19 C -0.140 4.140 20 C -0.133 4.133 21 C -0.129 4.129 22 C -0.164 4.164 23 C 0.020 3.980 24 H 0.090 0.910 25 O -0.352 6.352 26 C -0.189 4.189 27 C -0.139 4.139 28 H 0.224 0.776 29 H 0.138 0.862 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.111 0.889 36 H 0.112 0.888 37 H 0.234 0.766 38 H 0.085 0.915 39 H 0.116 0.884 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.100 0.900 46 H 0.120 0.880 47 H 0.232 0.768 48 H 0.115 0.885 49 H 0.099 0.901 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.845 -0.347 5.123 7.060 hybrid contribution -0.760 -0.618 1.286 1.617 sum 4.085 -0.965 6.410 7.662 Atomic orbital electron populations 1.86624 1.17490 1.79988 1.49236 1.25106 0.84133 1.11169 0.98311 0.94875 0.91617 0.74109 0.80071 1.20082 0.97815 0.93483 0.96445 1.20982 1.01326 0.99984 0.95070 1.20898 0.97628 0.93563 0.97003 1.21305 1.04656 0.96060 1.00429 1.19057 0.95269 0.82518 0.94712 1.86179 1.73664 1.20020 1.40102 1.22454 1.00604 0.92068 0.88621 1.19933 0.80119 0.87338 0.82561 1.90786 1.38106 1.74672 1.35049 1.45644 1.58378 1.10223 1.23098 1.21239 0.99087 0.79413 0.97838 1.20927 0.95205 0.96976 0.92098 1.19592 0.94229 0.98344 0.94843 1.21063 0.99893 0.98988 0.93940 1.21177 0.95358 0.99855 0.97073 1.21216 0.94797 0.98489 0.99514 1.21196 1.00021 0.98191 0.93932 1.20988 0.94614 1.00083 0.97221 1.23235 0.94470 0.98444 1.00285 1.22631 0.96029 0.97597 0.81696 0.90968 1.86494 1.96608 1.36053 1.16094 1.23682 0.98753 0.94132 1.02331 1.20285 1.02896 0.93650 0.97105 0.77632 0.86183 1.18238 1.18522 0.85323 0.85137 0.85266 0.88937 0.88796 0.76634 0.91477 0.88386 0.85882 0.85960 0.86050 0.85969 0.86145 0.89954 0.87978 0.76815 0.88523 0.90091 0.84632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.21 12.84 -35.23 -0.45 -1.66 16 2 C -0.08 -0.05 2.80 36.00 0.10 0.05 16 3 Si 0.69 -0.40 29.88 -169.99 -5.08 -5.48 16 4 C -0.08 -0.10 5.35 -104.65 -0.56 -0.66 16 5 C -0.16 -0.01 8.67 -39.56 -0.34 -0.35 16 6 C -0.07 0.03 10.04 -39.61 -0.40 -0.37 16 7 C -0.21 -0.06 9.04 -39.43 -0.36 -0.41 16 8 C 0.13 0.35 6.69 -39.21 -0.26 0.09 16 9 O -0.29 -1.15 9.67 -39.34 -0.38 -1.53 16 10 C 0.04 0.01 5.22 36.00 0.19 0.20 16 11 C 0.52 1.46 7.91 -10.99 -0.09 1.37 16 12 O -0.51 -4.01 16.49 -14.36 -0.24 -4.24 16 13 N -0.72 0.03 5.05 -60.30 -0.30 -0.27 16 14 C 0.15 0.08 4.86 -4.04 -0.02 0.06 16 15 C -0.05 0.09 0.64 -154.84 -0.10 -0.01 16 16 C -0.07 0.07 4.82 -104.63 -0.50 -0.43 16 17 C -0.12 0.18 9.05 -39.58 -0.36 -0.18 16 18 C -0.12 0.12 10.05 -39.58 -0.40 -0.28 16 19 C -0.12 0.05 10.05 -39.58 -0.40 -0.34 16 20 C -0.12 0.02 10.05 -39.58 -0.40 -0.38 16 21 C -0.11 0.02 9.24 -39.58 -0.37 -0.35 16 22 C -0.13 0.30 5.90 -25.92 -0.15 0.15 16 23 C 0.08 -0.17 5.27 -25.92 -0.14 -0.31 16 24 H 0.07 -0.23 8.14 -51.92 -0.42 -0.65 16 25 O -0.55 0.43 11.57 -35.23 -0.41 0.02 16 26 C -0.15 0.34 6.93 -25.92 -0.18 0.16 16 27 C -0.12 -0.35 9.63 -39.44 -0.38 -0.73 16 28 H 0.38 -0.24 8.70 45.56 0.40 0.15 16 29 H 0.12 0.01 7.96 -51.93 -0.41 -0.41 16 30 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 31 H -0.26 -0.29 7.01 56.52 0.40 0.10 16 32 H 0.13 -0.21 4.84 -52.49 -0.25 -0.47 16 33 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 34 H 0.13 -0.29 6.30 -52.49 -0.33 -0.62 16 35 H 0.09 -0.19 7.66 -51.93 -0.40 -0.59 16 36 H 0.09 -0.22 7.66 -51.93 -0.40 -0.61 16 37 H 0.40 -1.04 8.04 -40.82 -0.33 -1.37 16 38 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 39 H 0.10 0.22 6.03 -51.93 -0.31 -0.09 16 40 H 0.12 -0.41 6.40 -52.48 -0.34 -0.74 16 41 H 0.12 -0.31 8.06 -52.49 -0.42 -0.74 16 42 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 43 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 44 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 45 H 0.08 -0.15 7.49 -51.93 -0.39 -0.54 16 46 H 0.10 -0.36 6.78 -51.93 -0.35 -0.71 16 47 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 48 H 0.10 -0.24 8.10 -51.93 -0.42 -0.66 16 49 H 0.08 -0.17 8.10 -51.93 -0.42 -0.59 16 50 H 0.14 0.48 8.06 -52.49 -0.42 0.06 16 LS Contribution 409.28 15.07 6.17 6.17 Total: 0.00 -10.67 409.28 -11.91 -22.57 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -6.11 Total: -12.83 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -5.11 Total: -2.74 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.30 Total: -0.27 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -1.48 Total: -7.42 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.08 Total: -5.48 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.67 -11.91 -22.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4860298.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.258 kcal (2) G-P(sol) polarization free energy of solvation -10.666 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.924 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds