Wall clock time and date at job start Sat Mar 6 2021 23:26:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35983 * 116.99577 * 2 1 4 4 C 1.38674 * 119.99708 * 180.02562 * 3 2 1 5 5 C 1.38153 * 120.00277 * 179.74692 * 4 3 2 6 6 C 1.50699 * 120.00505 * 180.25217 * 5 4 3 7 7 O 1.42905 * 109.46809 * 255.25396 * 6 5 4 8 8 Si 1.86292 * 109.47188 * 15.25502 * 6 5 4 9 9 C 1.38685 * 119.99437 * 0.50905 * 5 4 3 10 10 O 1.35983 * 119.99731 * 179.74685 * 9 5 4 11 11 C 1.42898 * 116.99791 * 179.72805 * 10 9 5 12 12 C 1.50703 * 109.47196 * 179.97438 * 11 10 9 13 13 O 1.21280 * 119.99727 * 359.71666 * 12 11 10 14 14 N 1.34772 * 120.00108 * 179.97438 * 12 11 10 15 15 C 1.46501 * 119.99946 * 179.97438 * 14 12 11 16 16 C 1.53005 * 109.46808 * 176.03978 * 15 14 12 17 17 C 1.50698 * 112.85099 * 73.55962 * 16 15 14 18 18 C 1.38237 * 120.00063 * 246.00230 * 17 16 15 19 19 C 1.38226 * 119.99845 * 179.76520 * 18 17 16 20 20 C 1.38230 * 120.00393 * 0.50438 * 19 18 17 21 21 C 1.38238 * 119.99798 * 359.74754 * 20 19 18 22 22 C 1.38233 * 120.00109 * 0.02562 * 21 20 19 23 23 C 1.53775 * 113.61611 * 302.35855 * 16 15 14 24 24 C 1.53782 * 87.08267 * 270.88559 * 23 16 15 25 25 H 1.09004 * 113.61336 * 219.93345 * 24 23 16 26 26 O 1.42901 * 113.61485 * 89.11966 * 24 23 16 27 27 C 1.53777 * 87.08277 * 334.56700 * 24 23 16 28 28 C 1.38719 * 119.99990 * 359.46726 * 9 5 4 29 29 C 1.38108 * 120.00043 * 0.28243 * 28 9 5 30 30 H 1.08994 * 109.47310 * 60.00072 * 1 2 3 31 31 H 1.08998 * 109.46755 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.46815 * 299.99716 * 1 2 3 33 33 H 1.08004 * 119.99992 * 0.02562 * 4 3 2 34 34 H 1.09000 * 109.47290 * 135.26078 * 6 5 4 35 35 H 0.96694 * 113.99779 * 60.00614 * 7 6 5 36 36 H 1.48502 * 110.00259 * 180.02562 * 8 6 5 37 37 H 1.48503 * 110.00022 * 301.32192 * 8 6 5 38 38 H 1.08998 * 109.47469 * 59.99915 * 11 10 9 39 39 H 1.08998 * 109.47159 * 299.99427 * 11 10 9 40 40 H 0.97001 * 119.99959 * 359.97438 * 14 12 11 41 41 H 1.08998 * 109.47082 * 296.03954 * 15 14 12 42 42 H 1.08996 * 109.46992 * 56.04484 * 15 14 12 43 43 H 1.07997 * 119.99773 * 359.97438 * 18 17 16 44 44 H 1.08003 * 120.00048 * 180.23105 * 19 18 17 45 45 H 1.07996 * 120.00726 * 179.72344 * 20 19 18 46 46 H 1.08005 * 119.99976 * 179.97438 * 21 20 19 47 47 H 1.07997 * 120.00099 * 179.97438 * 22 21 20 48 48 H 1.09002 * 113.61547 * 25.43633 * 23 16 15 49 49 H 1.09003 * 113.61617 * 156.33766 * 23 16 15 50 50 H 0.96696 * 114.00623 * 180.02562 * 26 24 23 51 51 H 1.09000 * 113.61455 * 270.88708 * 27 24 23 52 52 H 1.09000 * 113.61660 * 139.97869 * 27 24 23 53 53 H 1.08003 * 119.99951 * 180.25496 * 28 9 5 54 54 H 1.08001 * 120.00134 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5152 -0.0058 6 6 5.5633 2.5941 -0.0121 7 8 6.0263 2.9644 1.2881 8 14 6.2703 0.9335 -0.4735 9 6 3.3030 3.6783 0.0001 10 8 3.9204 4.8899 0.0001 11 6 3.0804 6.0459 0.0003 12 6 3.9346 7.2875 0.0009 13 8 5.1436 7.1918 0.0063 14 7 3.3549 8.5042 0.0007 15 6 4.1853 9.7112 0.0018 16 6 3.2888 10.9470 -0.0983 17 6 2.5511 11.2403 1.1826 18 6 1.1737 11.1325 1.2272 19 6 0.4975 11.3967 2.4035 20 6 1.1977 11.7789 3.5324 21 6 2.5747 11.8918 3.4864 22 6 3.2514 11.6230 2.3114 23 6 2.3872 10.9547 -1.3440 24 6 3.5383 11.6646 -2.0761 25 1 3.2061 12.4564 -2.7476 26 8 4.4649 10.7676 -2.6916 27 6 3.9956 12.1737 -0.6990 28 6 1.9177 3.6056 0.0001 29 6 1.2908 2.3750 0.0002 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 4.0194 0.3785 -0.0014 34 1 5.8850 3.3405 -0.7385 35 1 5.7761 2.3438 1.9862 36 1 7.7539 0.9979 -0.4827 37 1 5.8132 -0.0989 0.4911 38 1 2.4512 6.0378 0.8903 39 1 2.4511 6.0379 -0.8896 40 1 2.3879 8.5808 -0.0003 41 1 4.7620 9.7545 0.9257 42 1 4.8649 9.6854 -0.8499 43 1 0.6262 10.8385 0.3439 44 1 -0.5783 11.3089 2.4394 45 1 0.6691 11.9897 4.4502 46 1 3.1218 12.1908 4.3683 47 1 4.3271 11.7115 2.2754 48 1 2.1706 9.9595 -1.7324 49 1 1.4946 11.5704 -1.2332 50 1 5.1913 11.2081 -3.1533 51 1 3.5427 13.1226 -0.4118 52 1 5.0775 12.1626 -0.5666 53 1 1.3295 4.5114 0.0006 54 1 0.2123 2.3185 0.0006 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_4974302.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:23 Heat of formation + Delta-G solvation = -92.710529 kcal Electronic energy + Delta-G solvation = -37895.524030 eV Core-core repulsion = 32959.284993 eV Total energy + Delta-G solvation = -4936.239037 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -41.99061 -41.68657 -40.62758 -39.73173 -39.26863 -38.29441 -36.98909 -36.41028 -35.06913 -32.84358 -31.95204 -31.73490 -31.20624 -30.03118 -28.14727 -27.71511 -26.86585 -26.64599 -24.74059 -23.59331 -23.19885 -22.44064 -22.33513 -21.65164 -19.98157 -19.66975 -18.79341 -18.61813 -18.46704 -17.80244 -17.66791 -17.51020 -17.27903 -16.87734 -16.64875 -16.42666 -16.09679 -16.08030 -15.81890 -15.78929 -15.58373 -15.34590 -15.19699 -15.09675 -14.64493 -14.43704 -14.32390 -14.19606 -14.08673 -13.99772 -13.67468 -13.47556 -13.41704 -13.20075 -13.06373 -13.00636 -12.71070 -12.50373 -12.43977 -12.22502 -11.90778 -11.86844 -11.75200 -11.61504 -11.42883 -11.25007 -11.01228 -10.72826 -10.56931 -10.14173 -10.12394 -9.82791 -9.61864 -8.79866 -4.96147 0.05907 0.36160 0.41932 0.48792 1.26270 1.45060 1.48552 1.55251 1.90694 2.34783 2.54603 2.59815 2.82857 3.16530 3.35736 3.41179 3.45335 3.55661 3.66841 3.74080 3.74577 3.76330 3.91267 3.99592 4.04556 4.09879 4.13175 4.13342 4.14728 4.25030 4.27726 4.42955 4.43361 4.44031 4.47994 4.52185 4.62897 4.68577 4.69028 4.74711 4.78861 4.83450 4.86394 4.98600 4.99614 5.07963 5.14175 5.15247 5.17789 5.20891 5.21987 5.29531 5.43340 5.58675 5.63872 5.66852 6.10070 6.18184 6.39834 6.47057 6.51286 6.86704 7.10695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.335 6.335 3 C 0.089 3.911 4 C -0.125 4.125 5 C -0.118 4.118 6 C -0.079 4.079 7 O -0.545 6.545 8 Si 0.777 3.223 9 C 0.100 3.900 10 O -0.309 6.309 11 C 0.039 3.961 12 C 0.511 3.489 13 O -0.571 6.571 14 N -0.703 5.703 15 C 0.151 3.849 16 C -0.044 4.044 17 C -0.072 4.072 18 C -0.120 4.120 19 C -0.123 4.123 20 C -0.135 4.135 21 C -0.131 4.131 22 C -0.128 4.128 23 C -0.122 4.122 24 C 0.078 3.922 25 H 0.087 0.913 26 O -0.568 6.568 27 C -0.149 4.149 28 C -0.164 4.164 29 C -0.157 4.157 30 H 0.069 0.931 31 H 0.113 0.887 32 H 0.065 0.935 33 H 0.147 0.853 34 H 0.105 0.895 35 H 0.382 0.618 36 H -0.300 1.300 37 H -0.271 1.271 38 H 0.118 0.882 39 H 0.125 0.875 40 H 0.415 0.585 41 H 0.047 0.953 42 H 0.079 0.921 43 H 0.146 0.854 44 H 0.140 0.860 45 H 0.131 0.869 46 H 0.126 0.874 47 H 0.116 0.884 48 H 0.080 0.920 49 H 0.120 0.880 50 H 0.395 0.605 51 H 0.103 0.897 52 H 0.073 0.927 53 H 0.163 0.837 54 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.036 3.295 -2.867 11.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.249 6.249 3 C 0.044 3.956 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.187 4.187 7 O -0.352 6.352 8 Si 0.681 3.319 9 C 0.055 3.945 10 O -0.222 6.222 11 C -0.039 4.039 12 C 0.297 3.703 13 O -0.449 6.449 14 N -0.356 5.356 15 C 0.027 3.973 16 C -0.045 4.045 17 C -0.072 4.072 18 C -0.137 4.137 19 C -0.141 4.141 20 C -0.153 4.153 21 C -0.149 4.149 22 C -0.146 4.146 23 C -0.159 4.159 24 C 0.019 3.981 25 H 0.105 0.895 26 O -0.376 6.376 27 C -0.188 4.188 28 C -0.183 4.183 29 C -0.175 4.175 30 H 0.087 0.913 31 H 0.132 0.868 32 H 0.083 0.917 33 H 0.164 0.836 34 H 0.123 0.877 35 H 0.230 0.770 36 H -0.228 1.228 37 H -0.197 1.197 38 H 0.135 0.865 39 H 0.143 0.857 40 H 0.252 0.748 41 H 0.066 0.934 42 H 0.097 0.903 43 H 0.164 0.836 44 H 0.158 0.842 45 H 0.149 0.851 46 H 0.144 0.856 47 H 0.134 0.866 48 H 0.099 0.901 49 H 0.138 0.862 50 H 0.246 0.754 51 H 0.121 0.879 52 H 0.092 0.908 53 H 0.181 0.819 54 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -9.550 2.495 -2.700 10.233 hybrid contribution -0.066 1.050 1.407 1.756 sum -9.616 3.544 -1.293 10.330 Atomic orbital electron populations 1.23347 0.76400 1.05543 1.02400 1.86082 1.23394 1.26414 1.89031 1.18938 0.91965 0.85205 0.99541 1.20277 0.92587 0.97019 1.04423 1.19373 0.96081 0.90538 1.05883 1.25165 0.91999 1.13722 0.87783 1.86662 1.78562 1.52661 1.17336 0.93983 0.76539 0.72304 0.89039 1.18872 0.91570 0.84517 0.99590 1.86212 1.35101 1.11867 1.89036 1.22659 0.92601 0.82293 1.06382 1.20525 0.88364 0.85394 0.76014 1.90768 1.16759 1.87340 1.50041 1.45531 1.11136 1.04250 1.74702 1.21101 0.92717 0.81828 1.01631 1.20782 0.96638 0.95035 0.92038 1.19663 0.93998 0.99522 0.94032 1.21311 0.93251 1.00262 0.98917 1.21457 1.00999 0.98784 0.92831 1.21444 0.94376 0.99938 0.99522 1.21363 0.95168 1.00170 0.98219 1.21112 1.00052 1.00250 0.93182 1.23286 0.96903 1.02846 0.92873 1.22726 0.90699 0.92211 0.92465 0.89521 1.86462 1.41241 1.36822 1.73090 1.23692 1.01223 0.97090 0.96752 1.21372 0.92111 1.00006 1.04773 1.21393 1.01535 0.90830 1.03776 0.91252 0.86829 0.91669 0.83599 0.87732 0.76961 1.22848 1.19729 0.86483 0.85729 0.74848 0.93443 0.90308 0.83609 0.84199 0.85095 0.85599 0.86581 0.90097 0.86169 0.75433 0.87870 0.90814 0.81925 0.82172 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.88 10.50 -93.35 -0.98 -1.86 16 3 C 0.09 0.27 6.68 22.49 0.15 0.42 16 4 C -0.12 -0.55 8.59 22.35 0.19 -0.36 16 5 C -0.12 -0.76 5.27 -19.78 -0.10 -0.87 16 6 C -0.08 -0.65 2.37 71.24 0.17 -0.48 16 7 O -0.54 -6.46 12.88 -148.98 -1.92 -8.38 16 8 Si 0.78 2.90 30.26 68.60 2.08 4.97 16 9 C 0.10 0.59 6.66 22.49 0.15 0.74 16 10 O -0.31 -2.94 9.00 -74.32 -0.67 -3.61 16 11 C 0.04 0.03 5.22 71.24 0.37 0.40 16 12 C 0.51 3.84 7.91 87.66 0.69 4.53 16 13 O -0.57 -11.14 16.50 16.01 0.26 -10.88 16 14 N -0.70 -0.61 5.07 -463.06 -2.35 -2.96 16 15 C 0.15 0.47 4.87 86.38 0.42 0.89 16 16 C -0.04 0.12 0.65 -52.40 -0.03 0.09 16 17 C -0.07 0.12 4.86 -19.87 -0.10 0.02 16 18 C -0.12 0.48 9.05 22.27 0.20 0.68 16 19 C -0.12 0.35 10.05 22.26 0.22 0.57 16 20 C -0.13 0.08 10.05 22.27 0.22 0.31 16 21 C -0.13 -0.14 10.05 22.27 0.22 0.09 16 22 C -0.13 -0.16 9.23 22.27 0.21 0.04 16 23 C -0.12 0.72 5.87 31.12 0.18 0.90 16 24 C 0.08 -0.36 5.28 31.12 0.16 -0.19 16 25 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 26 O -0.57 0.51 11.58 -148.98 -1.73 -1.22 16 27 C -0.15 0.57 6.92 31.12 0.22 0.79 16 28 C -0.16 0.08 9.03 22.35 0.20 0.28 16 29 C -0.16 0.15 9.03 22.35 0.20 0.36 16 30 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 31 H 0.11 -0.91 8.14 -2.39 -0.02 -0.93 16 32 H 0.06 -0.48 7.66 -2.39 -0.02 -0.50 16 33 H 0.15 0.42 4.86 -2.91 -0.01 0.40 16 34 H 0.10 1.12 7.82 -2.39 -0.02 1.10 16 35 H 0.38 1.75 8.70 -74.06 -0.64 1.11 16 36 H -0.30 -3.29 7.11 99.48 0.71 -2.58 16 37 H -0.27 -1.50 6.68 99.48 0.66 -0.84 16 38 H 0.12 -0.58 7.66 -2.39 -0.02 -0.60 16 39 H 0.13 -0.78 7.66 -2.39 -0.02 -0.80 16 40 H 0.41 -2.40 7.89 -92.71 -0.73 -3.13 16 41 H 0.05 0.33 7.80 -2.39 -0.02 0.32 16 42 H 0.08 0.57 6.06 -2.39 -0.01 0.56 16 43 H 0.15 -1.32 6.42 -2.91 -0.02 -1.34 16 44 H 0.14 -0.96 8.06 -2.91 -0.02 -0.98 16 45 H 0.13 -0.44 8.06 -2.91 -0.02 -0.47 16 46 H 0.13 -0.11 8.06 -2.91 -0.02 -0.14 16 47 H 0.12 0.14 8.06 -2.91 -0.02 0.11 16 48 H 0.08 -0.42 7.35 -2.39 -0.02 -0.44 16 49 H 0.12 -1.12 6.80 -2.39 -0.02 -1.14 16 50 H 0.40 -3.01 9.12 -74.06 -0.68 -3.68 16 51 H 0.10 -0.52 8.10 -2.39 -0.02 -0.54 16 52 H 0.07 -0.17 8.10 -2.39 -0.02 -0.19 16 53 H 0.16 -1.21 6.29 -2.91 -0.02 -1.23 16 54 H 0.16 -1.10 6.29 -2.91 -0.02 -1.11 16 Total: 0.00 -30.64 437.77 -1.31 -31.95 By element: Atomic # 1 Polarization: -17.17 SS G_CDS: -1.08 Total: -18.25 kcal Atomic # 6 Polarization: 5.16 SS G_CDS: 5.07 Total: 10.23 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -2.35 Total: -2.96 kcal Atomic # 8 Polarization: -20.91 SS G_CDS: -5.03 Total: -25.94 kcal Atomic # 14 Polarization: 2.90 SS G_CDS: 2.08 Total: 4.97 kcal Total: -30.64 -1.31 -31.95 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4974302.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.759 kcal (2) G-P(sol) polarization free energy of solvation -30.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds