Wall clock time and date at job start Sat Mar 6 2021 23:26:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35900 * 116.99611 * 2 1 4 4 C 1.38610 * 120.02262 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.89090 * 180.02562 * 4 3 2 6 6 O 1.35899 * 120.03175 * 179.97438 * 5 4 3 7 7 C 1.42911 * 116.99670 * 0.02562 * 6 5 4 8 8 C 1.50695 * 109.46745 * 179.97438 * 7 6 5 9 9 O 1.21284 * 120.00581 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99715 * 179.97438 * 8 7 6 11 11 C 1.46505 * 120.00339 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47400 * 176.16147 * 11 10 8 13 13 C 1.50707 * 112.84442 * 73.46160 * 12 11 10 14 14 C 1.38236 * 119.99511 * 246.00519 * 13 12 11 15 15 C 1.38239 * 119.99313 * 179.77099 * 14 13 12 16 16 C 1.38230 * 120.00099 * 0.50886 * 15 14 13 17 17 C 1.38234 * 120.00257 * 359.74771 * 16 15 14 18 18 C 1.38234 * 119.99895 * 66.28906 * 13 12 11 19 19 C 1.53778 * 113.61464 * 302.26672 * 12 11 10 20 20 C 1.53782 * 87.08125 * 270.88043 * 19 12 11 21 21 H 1.09002 * 113.61623 * 219.93402 * 20 19 12 22 22 O 1.42900 * 113.61140 * 89.11553 * 20 19 12 23 23 C 1.53779 * 113.61549 * 204.76475 * 12 11 10 24 24 C 1.38756 * 119.94467 * 0.25566 * 5 4 3 25 25 C 1.50703 * 119.97183 * 179.74915 * 24 5 4 26 26 O 1.42899 * 109.47309 * 75.00061 * 25 24 5 27 27 Si 1.86302 * 109.46655 * 194.99976 * 25 24 5 28 28 C 1.38193 * 120.05031 * 359.49177 * 24 5 4 29 29 C 1.38155 * 120.11178 * 0.50785 * 28 24 5 30 30 H 1.09005 * 109.47220 * 59.99500 * 1 2 3 31 31 H 1.09000 * 109.47012 * 179.97438 * 1 2 3 32 32 H 1.08999 * 109.46870 * 300.00049 * 1 2 3 33 33 H 1.08001 * 120.05942 * 0.02562 * 4 3 2 34 34 H 1.08998 * 109.47159 * 59.99576 * 7 6 5 35 35 H 1.08995 * 109.46422 * 299.99723 * 7 6 5 36 36 H 0.97000 * 120.00106 * 0.02562 * 10 8 7 37 37 H 1.09003 * 109.46990 * 296.16651 * 11 10 8 38 38 H 1.09000 * 109.46893 * 56.16150 * 11 10 8 39 39 H 1.07993 * 120.00300 * 0.02562 * 14 13 12 40 40 H 1.08003 * 120.00027 * 180.23789 * 15 14 13 41 41 H 1.08005 * 120.00035 * 179.72738 * 16 15 14 42 42 H 1.07996 * 120.00171 * 179.97438 * 17 16 15 43 43 H 1.07994 * 120.00093 * 359.97438 * 18 13 12 44 44 H 1.08997 * 113.61875 * 25.43209 * 19 12 11 45 45 H 1.09007 * 113.61453 * 156.33409 * 19 12 11 46 46 H 0.96697 * 114.00090 * 179.97438 * 22 20 19 47 47 H 1.08996 * 113.61629 * 203.66394 * 23 12 11 48 48 H 1.08995 * 113.61543 * 334.57554 * 23 12 11 49 49 H 1.09000 * 109.46842 * 314.99480 * 25 24 5 50 50 H 0.96701 * 113.99390 * 180.02562 * 26 25 24 51 51 H 1.48504 * 109.99954 * 299.99359 * 27 25 24 52 52 H 1.48498 * 110.00226 * 61.31605 * 27 25 24 53 53 H 1.08008 * 119.94592 * 180.25784 * 28 24 5 54 54 H 1.08003 * 119.97238 * 179.72536 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0566 2.5210 0.0011 6 8 5.4136 2.5961 0.0021 7 6 6.1316 1.3605 0.0021 8 6 7.6124 1.6402 0.0027 9 8 8.0135 2.7848 0.0026 10 7 8.4912 0.6184 0.0032 11 6 9.9308 0.8901 0.0033 12 6 10.6990 -0.4295 0.1005 13 6 10.6675 -1.2207 -1.1818 14 6 10.0121 -2.4369 -1.2275 15 6 9.9792 -3.1604 -2.4050 16 6 10.6107 -2.6726 -3.5337 17 6 11.2707 -1.4589 -3.4865 18 6 11.2991 -0.7329 -2.3105 19 6 10.3429 -1.2592 1.3453 20 6 11.4583 -0.4945 2.0774 21 1 12.0490 -1.1194 2.7473 22 8 11.0129 0.7146 2.6951 23 6 12.1072 -0.2797 0.6998 24 6 3.2971 3.6822 0.0064 25 6 3.9774 5.0269 0.0127 26 8 4.5037 5.3006 -1.2873 27 14 2.7438 6.3447 0.4734 28 6 1.9172 3.6065 0.0006 29 6 1.2906 2.3753 0.0001 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 4.0197 0.3792 0.0005 34 1 5.8706 0.7886 -0.8883 35 1 5.8693 0.7879 0.8916 36 1 8.1705 -0.2971 0.0029 37 1 10.2038 1.4024 -0.9193 38 1 10.1815 1.5202 0.8566 39 1 9.5222 -2.8199 -0.3445 40 1 9.4639 -4.1088 -2.4419 41 1 10.5888 -3.2400 -4.4525 42 1 11.7644 -1.0780 -4.3683 43 1 11.8147 0.2153 -2.2736 44 1 9.3455 -1.0558 1.7351 45 1 10.5452 -2.3244 1.2326 46 1 11.7098 1.1999 3.1575 47 1 12.7919 -1.0771 0.4107 48 1 12.5342 0.7145 0.5686 49 1 4.7897 5.0196 0.7395 50 1 4.9569 6.1520 -1.3569 51 1 1.6311 6.3649 -0.5099 52 1 2.2126 6.0891 1.8364 53 1 1.3276 4.5115 0.0006 54 1 0.2120 2.3187 0.0000 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_4974312.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:28 Heat of formation + Delta-G solvation = -93.015415 kcal Electronic energy + Delta-G solvation = -38030.689602 eV Core-core repulsion = 33094.437345 eV Total energy + Delta-G solvation = -4936.252258 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 2.12 seconds Orbital eigenvalues (eV) -42.04684 -41.78321 -40.69343 -39.82829 -39.27209 -38.25283 -37.06134 -36.41952 -35.08089 -32.51795 -31.97101 -31.75329 -31.62709 -30.22950 -28.51536 -27.89702 -26.87799 -26.12892 -24.76729 -23.73470 -23.20658 -22.48543 -22.33818 -21.68585 -20.03364 -19.97466 -18.63872 -18.52223 -18.41004 -17.93749 -17.68532 -17.55511 -17.43637 -16.90218 -16.78166 -16.77046 -16.43052 -15.93369 -15.83267 -15.71743 -15.66881 -15.38703 -15.22515 -15.12400 -14.63351 -14.41668 -14.24266 -14.12464 -14.06757 -13.88452 -13.73744 -13.50376 -13.43374 -13.26256 -13.19672 -13.05582 -12.71686 -12.59414 -12.48782 -12.22533 -12.01227 -11.93888 -11.88866 -11.76456 -11.61562 -11.26123 -11.05272 -10.73238 -10.22812 -10.14466 -9.85619 -9.82810 -9.61972 -9.24876 -4.94582 0.01489 0.14857 0.41893 0.48715 1.29874 1.35588 1.40365 1.63583 1.91286 2.11885 2.38870 2.48653 2.82749 3.16350 3.34373 3.41572 3.46491 3.54454 3.55985 3.73709 3.75651 3.82529 3.84629 3.94673 3.96672 3.98259 4.08455 4.13204 4.14720 4.17433 4.26311 4.27582 4.31247 4.31682 4.43183 4.51066 4.52379 4.62911 4.68375 4.68643 4.74642 4.83384 4.85790 4.86684 4.99187 5.05762 5.07780 5.11928 5.14015 5.17487 5.20772 5.26266 5.29908 5.58566 5.63801 5.66559 6.00230 6.10012 6.21851 6.36932 6.87226 6.90011 7.05286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.167 3.833 4 C -0.248 4.248 5 C 0.179 3.821 6 O -0.296 6.296 7 C 0.034 3.966 8 C 0.516 3.484 9 O -0.564 6.564 10 N -0.703 5.703 11 C 0.151 3.849 12 C -0.045 4.045 13 C -0.073 4.073 14 C -0.121 4.121 15 C -0.124 4.124 16 C -0.135 4.135 17 C -0.130 4.130 18 C -0.126 4.126 19 C -0.124 4.124 20 C 0.079 3.921 21 H 0.087 0.913 22 O -0.568 6.568 23 C -0.147 4.147 24 C -0.167 4.167 25 C -0.076 4.076 26 O -0.564 6.564 27 Si 0.781 3.219 28 C -0.056 4.056 29 C -0.240 4.240 30 H 0.066 0.934 31 H 0.122 0.878 32 H 0.067 0.933 33 H 0.160 0.840 34 H 0.117 0.883 35 H 0.123 0.877 36 H 0.414 0.586 37 H 0.051 0.949 38 H 0.081 0.919 39 H 0.144 0.856 40 H 0.138 0.862 41 H 0.131 0.869 42 H 0.128 0.872 43 H 0.119 0.881 44 H 0.078 0.922 45 H 0.119 0.881 46 H 0.396 0.604 47 H 0.103 0.897 48 H 0.076 0.924 49 H 0.065 0.935 50 H 0.396 0.604 51 H -0.278 1.278 52 H -0.284 1.284 53 H 0.136 0.864 54 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.787 -5.091 2.042 5.542 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.121 3.879 4 C -0.268 4.268 5 C 0.133 3.867 6 O -0.208 6.208 7 C -0.044 4.044 8 C 0.301 3.699 9 O -0.442 6.442 10 N -0.356 5.356 11 C 0.028 3.972 12 C -0.045 4.045 13 C -0.073 4.073 14 C -0.139 4.139 15 C -0.142 4.142 16 C -0.153 4.153 17 C -0.148 4.148 18 C -0.144 4.144 19 C -0.162 4.162 20 C 0.020 3.980 21 H 0.104 0.896 22 O -0.376 6.376 23 C -0.185 4.185 24 C -0.168 4.168 25 C -0.185 4.185 26 O -0.373 6.373 27 Si 0.685 3.315 28 C -0.074 4.074 29 C -0.258 4.258 30 H 0.084 0.916 31 H 0.140 0.860 32 H 0.086 0.914 33 H 0.178 0.822 34 H 0.134 0.866 35 H 0.140 0.860 36 H 0.250 0.750 37 H 0.070 0.930 38 H 0.099 0.901 39 H 0.161 0.839 40 H 0.156 0.844 41 H 0.149 0.851 42 H 0.146 0.854 43 H 0.137 0.863 44 H 0.097 0.903 45 H 0.137 0.863 46 H 0.246 0.754 47 H 0.121 0.879 48 H 0.095 0.905 49 H 0.083 0.917 50 H 0.246 0.754 51 H -0.205 1.205 52 H -0.211 1.211 53 H 0.153 0.847 54 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -0.330 -4.901 1.894 5.264 hybrid contribution 0.513 -0.759 -0.143 0.927 sum 0.183 -5.660 1.751 5.927 Atomic orbital electron populations 1.23428 0.75951 1.05965 1.02527 1.86061 1.23786 1.26035 1.87859 1.18792 0.91682 0.84831 0.92635 1.20615 0.93339 0.97548 1.15251 1.18525 0.82066 0.92939 0.93186 1.86201 1.14982 1.31656 1.87951 1.22738 0.88784 0.86424 1.06423 1.20291 0.88199 0.85201 0.76195 1.90747 1.80644 1.22908 1.49946 1.45546 1.06238 1.09245 1.74612 1.21134 0.78336 0.95829 1.01903 1.20790 0.97965 0.93846 0.91913 1.19670 0.98181 0.95274 0.94146 1.21305 0.99495 0.94265 0.98846 1.21450 0.99268 1.00587 0.92917 1.21444 0.98034 0.96382 0.99436 1.21373 0.99685 0.95484 0.98295 1.21121 1.00134 1.00122 0.93035 1.23294 0.99956 0.99780 0.93123 1.22715 0.96121 0.86703 0.92509 0.89563 1.86462 1.40970 1.37188 1.72974 1.23677 0.94677 1.03642 0.96548 1.18953 0.92903 0.93369 1.11561 1.24838 1.05006 0.99929 0.88683 1.86450 1.77468 1.44181 1.29225 0.94091 0.76420 0.84831 0.76173 1.20765 0.92548 0.98292 0.95754 1.21341 1.01620 0.91206 1.11662 0.91577 0.85960 0.91412 0.82232 0.86563 0.85963 0.74970 0.93047 0.90075 0.83862 0.84400 0.85109 0.85422 0.86265 0.90321 0.86321 0.75387 0.87880 0.90529 0.91718 0.75385 1.20515 1.21058 0.84654 0.82593 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.32 -1.29 10.50 -92.43 -0.97 -2.26 16 3 C 0.17 1.06 6.68 22.49 0.15 1.21 16 4 C -0.25 -1.63 8.97 22.46 0.20 -1.43 16 5 C 0.18 1.89 6.66 22.49 0.15 2.04 16 6 O -0.30 -3.47 8.99 -73.37 -0.66 -4.13 16 7 C 0.03 0.11 5.22 71.23 0.37 0.49 16 8 C 0.52 4.14 7.91 87.66 0.69 4.83 16 9 O -0.56 -10.36 16.50 16.00 0.26 -10.10 16 10 N -0.70 -1.12 5.07 -463.05 -2.35 -3.47 16 11 C 0.15 0.44 4.86 86.38 0.42 0.86 16 12 C -0.04 0.11 0.65 -52.40 -0.03 0.08 16 13 C -0.07 0.08 4.85 -19.86 -0.10 -0.02 16 14 C -0.12 0.35 9.05 22.27 0.20 0.55 16 15 C -0.12 0.21 10.05 22.27 0.22 0.44 16 16 C -0.14 -0.01 10.05 22.27 0.22 0.21 16 17 C -0.13 -0.16 10.05 22.27 0.22 0.06 16 18 C -0.13 -0.16 9.23 22.27 0.21 0.04 16 19 C -0.12 0.63 5.87 31.12 0.18 0.81 16 20 C 0.08 -0.34 5.28 31.12 0.16 -0.18 16 21 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 22 O -0.57 0.55 11.58 -148.98 -1.72 -1.17 16 23 C -0.15 0.59 6.92 31.12 0.22 0.80 16 24 C -0.17 -1.84 5.30 -19.75 -0.10 -1.95 16 25 C -0.08 -0.62 2.37 71.24 0.17 -0.45 16 26 O -0.56 -5.23 12.86 -148.98 -1.92 -7.14 16 27 Si 0.78 1.71 30.20 68.60 2.07 3.78 16 28 C -0.06 -0.47 8.65 22.24 0.19 -0.27 16 29 C -0.24 -1.32 9.04 22.38 0.20 -1.12 16 30 H 0.07 -0.31 7.66 -2.38 -0.02 -0.32 16 31 H 0.12 -0.89 8.14 -2.39 -0.02 -0.91 16 32 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 33 H 0.16 0.17 6.30 -2.91 -0.02 0.15 16 34 H 0.12 -0.16 7.66 -2.39 -0.02 -0.18 16 35 H 0.12 -0.33 7.66 -2.39 -0.02 -0.35 16 36 H 0.41 -1.77 7.89 -92.71 -0.73 -2.50 16 37 H 0.05 0.32 7.80 -2.39 -0.02 0.30 16 38 H 0.08 0.54 6.06 -2.39 -0.01 0.52 16 39 H 0.14 -1.08 6.42 -2.91 -0.02 -1.10 16 40 H 0.14 -0.74 8.06 -2.91 -0.02 -0.76 16 41 H 0.13 -0.35 8.06 -2.91 -0.02 -0.37 16 42 H 0.13 -0.12 8.06 -2.91 -0.02 -0.15 16 43 H 0.12 0.08 8.06 -2.91 -0.02 0.05 16 44 H 0.08 -0.31 7.36 -2.39 -0.02 -0.33 16 45 H 0.12 -0.98 6.81 -2.38 -0.02 -1.00 16 46 H 0.40 -3.13 9.12 -74.06 -0.68 -3.80 16 47 H 0.10 -0.52 8.10 -2.39 -0.02 -0.54 16 48 H 0.08 -0.23 8.10 -2.39 -0.02 -0.25 16 49 H 0.06 0.58 7.82 -2.39 -0.02 0.56 16 50 H 0.40 -0.30 8.74 -74.06 -0.65 -0.94 16 51 H -0.28 -1.78 6.74 99.48 0.67 -1.11 16 52 H -0.28 -1.90 7.11 99.48 0.71 -1.19 16 53 H 0.14 0.84 4.89 -2.91 -0.01 0.83 16 54 H 0.16 0.00 6.29 -2.91 -0.02 -0.02 16 Total: 0.00 -29.52 437.86 -1.29 -30.81 By element: Atomic # 1 Polarization: -13.33 SS G_CDS: -1.08 Total: -14.40 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 5.07 Total: 8.07 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -2.35 Total: -3.47 kcal Atomic # 8 Polarization: -19.79 SS G_CDS: -5.01 Total: -24.79 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.07 Total: 3.78 kcal Total: -29.52 -1.29 -30.81 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_4974312.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.202 kcal (2) G-P(sol) polarization free energy of solvation -29.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.721 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.015 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.12 seconds