Wall clock time and date at job start Sat Mar 6 2021 23:26:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.46769 * 2 1 4 4 C 1.50697 * 109.47613 * 120.00439 * 2 1 3 5 5 C 1.38248 * 119.93819 * 245.01888 * 4 2 1 6 6 C 1.38236 * 120.04608 * 179.76515 * 5 4 2 7 7 Br 1.89093 * 120.03911 * 180.23578 * 6 5 4 8 8 C 1.38793 * 119.92471 * 0.48726 * 6 5 4 9 9 O 1.35919 * 120.06092 * 179.76944 * 8 6 5 10 10 C 1.42898 * 117.00291 * 179.72857 * 9 8 6 11 11 C 1.50702 * 109.47107 * 179.97438 * 10 9 8 12 12 O 1.21275 * 119.99642 * 359.97438 * 11 10 9 13 13 N 1.34776 * 119.99731 * 179.97438 * 11 10 9 14 14 C 1.46503 * 119.99613 * 179.97438 * 13 11 10 15 15 C 1.53004 * 109.46936 * 183.28076 * 14 13 11 16 16 C 1.50695 * 112.85133 * 287.81221 * 15 14 13 17 17 C 1.38236 * 120.00154 * 124.22919 * 16 15 14 18 18 C 1.38235 * 120.00029 * 179.76000 * 17 16 15 19 19 C 1.38232 * 119.99985 * 0.51354 * 18 17 16 20 20 C 1.38238 * 119.99997 * 359.74308 * 19 18 17 21 21 C 1.38231 * 119.99745 * 359.97438 * 20 19 18 22 22 C 1.53954 * 113.53590 * 156.49936 * 15 14 13 23 23 C 1.53784 * 87.02209 * 270.81579 * 22 15 14 24 24 H 1.08996 * 113.61768 * 220.05207 * 23 22 15 25 25 O 1.42895 * 113.61640 * 89.22570 * 23 22 15 26 26 C 1.53785 * 87.17365 * 334.63888 * 23 22 15 27 27 C 1.38722 * 119.88275 * 359.49155 * 8 6 5 28 28 C 1.38148 * 119.95185 * 0.25410 * 27 8 6 29 29 H 0.96692 * 114.00527 * 59.99545 * 1 2 3 30 30 H 1.09002 * 109.46645 * 240.00823 * 2 1 3 31 31 H 1.48504 * 110.00227 * 298.68028 * 3 2 1 32 32 H 1.48496 * 110.00483 * 60.00782 * 3 2 1 33 33 H 1.08000 * 119.97529 * 0.02562 * 5 4 2 34 34 H 1.08995 * 109.47377 * 59.99184 * 10 9 8 35 35 H 1.09002 * 109.46851 * 299.99581 * 10 9 8 36 36 H 0.97000 * 120.00303 * 359.97438 * 13 11 10 37 37 H 1.09000 * 109.46766 * 63.28954 * 14 13 11 38 38 H 1.08999 * 109.47344 * 303.28638 * 14 13 11 39 39 H 1.08002 * 119.99806 * 0.02562 * 17 16 15 40 40 H 1.08001 * 119.99972 * 180.22788 * 18 17 16 41 41 H 1.08002 * 119.99911 * 179.72086 * 19 18 17 42 42 H 1.08002 * 119.99923 * 179.97438 * 20 19 18 43 43 H 1.08007 * 119.99756 * 179.97438 * 21 20 19 44 44 H 1.08996 * 113.61395 * 156.29715 * 22 15 14 45 45 H 1.09002 * 113.66383 * 25.34101 * 22 15 14 46 46 H 0.96700 * 114.00123 * 80.86434 * 25 23 22 47 47 H 1.08994 * 113.61875 * 139.93357 * 26 23 22 48 48 H 1.09001 * 113.61224 * 270.75950 * 26 23 22 49 49 H 1.07997 * 120.02091 * 180.22710 * 27 8 6 50 50 H 1.08000 * 119.95936 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7105 1.2303 5 6 2.6385 -0.0110 2.1906 6 6 3.0963 -0.6594 3.3224 7 35 4.0575 0.2990 4.6388 8 6 2.8540 -2.0159 3.4889 9 8 3.3069 -2.6572 4.5984 10 6 3.0156 -4.0520 4.7058 11 6 3.5926 -4.5882 5.9906 12 8 4.1945 -3.8487 6.7401 13 7 3.4398 -5.8895 6.3066 14 6 4.0013 -6.4108 7.5553 15 6 3.7601 -7.9197 7.6321 16 6 2.3178 -8.2692 7.8937 17 6 1.6412 -9.1066 7.0265 18 6 0.3196 -9.4312 7.2691 19 6 -0.3286 -8.9099 8.3732 20 6 0.3464 -8.0683 9.2375 21 6 1.6696 -7.7484 8.9980 22 6 4.7526 -8.6550 8.5510 23 6 5.6569 -8.8097 7.3168 24 1 6.1452 -9.7820 7.2523 25 8 6.5627 -7.7203 7.1306 26 6 4.3817 -8.7031 6.4637 27 6 2.1438 -2.7147 2.5237 28 6 1.6841 -2.0606 1.3970 29 1 -0.3934 0.4417 -0.7649 30 1 1.7923 -0.5137 -0.8901 31 1 1.5878 2.4586 -1.2243 32 1 1.5616 2.4679 1.2085 33 1 2.8297 1.0437 2.0584 34 1 3.4563 -4.5814 3.8611 35 1 1.9355 -4.1989 4.7031 36 1 2.9581 -6.4808 5.7073 37 1 3.5193 -5.9223 8.4022 38 1 5.0727 -6.2122 7.5828 39 1 2.1465 -9.5107 6.1617 40 1 -0.2078 -10.0884 6.5936 41 1 -1.3625 -9.1599 8.5603 42 1 -0.1602 -7.6607 10.0999 43 1 2.1969 -7.0905 9.6731 44 1 4.3728 -9.6016 8.9354 45 1 5.1800 -8.0221 9.3288 46 1 7.3558 -7.7697 7.6816 47 1 4.5100 -8.1090 5.5590 48 1 3.9011 -9.6631 6.2752 49 1 1.9509 -3.7694 2.6527 50 1 1.1316 -2.6047 0.6453 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:41 Heat of formation + Delta-G solvation = -50.834791 kcal Electronic energy + Delta-G solvation = -35078.819695 eV Core-core repulsion = 30278.798335 eV Total energy + Delta-G solvation = -4800.021360 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -41.97640 -41.54494 -40.38838 -39.29009 -39.00973 -37.41229 -36.40043 -35.06165 -33.54688 -32.27261 -31.96912 -31.69265 -30.75305 -30.02520 -27.99882 -26.88798 -26.26074 -24.75840 -23.92970 -23.21713 -22.35628 -22.22669 -21.64409 -19.96428 -19.55779 -18.65026 -18.59130 -18.37901 -17.69034 -17.53132 -17.25727 -17.02055 -16.64784 -16.41932 -16.04230 -15.87985 -15.76188 -15.68789 -15.37691 -15.24239 -14.87871 -14.51122 -14.43140 -14.36277 -14.14597 -14.08841 -14.00294 -13.87766 -13.72920 -13.51327 -13.19384 -13.02943 -12.64625 -12.52973 -12.33469 -12.21451 -12.15509 -11.93252 -11.90819 -11.76927 -11.56212 -11.26203 -11.22068 -11.01910 -10.69700 -10.49854 -10.11147 -10.00918 -9.81829 -9.60133 -9.32264 -4.95999 -0.03804 0.06930 0.42834 0.49931 0.61694 1.26739 1.39041 1.45967 1.54806 1.91793 2.35905 2.48239 2.83935 3.16688 3.31944 3.37967 3.44481 3.55743 3.67157 3.75030 3.76419 3.79018 3.82451 3.99341 4.00977 4.03154 4.06371 4.13979 4.15295 4.28112 4.31584 4.39530 4.44754 4.53259 4.62966 4.65634 4.68710 4.76512 4.78896 4.85511 4.89126 5.01256 5.02691 5.08385 5.15121 5.18553 5.23117 5.29827 5.30772 5.45278 5.60002 5.65334 5.68410 6.03846 6.11183 6.41975 6.60279 6.87614 7.11326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.065 4.065 3 Si 0.732 3.268 4 C -0.113 4.113 5 C -0.057 4.057 6 C -0.141 4.141 7 Br -0.049 7.049 8 C 0.149 3.851 9 O -0.303 6.303 10 C 0.035 3.965 11 C 0.512 3.488 12 O -0.568 6.568 13 N -0.703 5.703 14 C 0.149 3.851 15 C -0.045 4.045 16 C -0.071 4.071 17 C -0.120 4.120 18 C -0.122 4.122 19 C -0.134 4.134 20 C -0.131 4.131 21 C -0.127 4.127 22 C -0.149 4.149 23 C 0.078 3.922 24 H 0.086 0.914 25 O -0.568 6.568 26 C -0.123 4.123 27 C -0.195 4.195 28 C -0.033 4.033 29 H 0.397 0.603 30 H 0.110 0.890 31 H -0.278 1.278 32 H -0.303 1.303 33 H 0.143 0.857 34 H 0.131 0.869 35 H 0.124 0.876 36 H 0.415 0.585 37 H 0.050 0.950 38 H 0.079 0.921 39 H 0.148 0.852 40 H 0.140 0.860 41 H 0.130 0.870 42 H 0.125 0.875 43 H 0.114 0.886 44 H 0.102 0.898 45 H 0.073 0.927 46 H 0.395 0.605 47 H 0.080 0.920 48 H 0.122 0.878 49 H 0.173 0.827 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.094 -9.640 -5.966 11.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.175 4.175 3 Si 0.638 3.362 4 C -0.114 4.114 5 C -0.077 4.077 6 C -0.221 4.221 7 Br 0.037 6.963 8 C 0.101 3.899 9 O -0.215 6.215 10 C -0.042 4.042 11 C 0.298 3.702 12 O -0.446 6.446 13 N -0.356 5.356 14 C 0.026 3.974 15 C -0.045 4.045 16 C -0.071 4.071 17 C -0.138 4.138 18 C -0.140 4.140 19 C -0.152 4.152 20 C -0.149 4.149 21 C -0.146 4.146 22 C -0.188 4.188 23 C 0.019 3.981 24 H 0.104 0.896 25 O -0.376 6.376 26 C -0.160 4.160 27 C -0.214 4.214 28 C -0.051 4.051 29 H 0.248 0.752 30 H 0.127 0.873 31 H -0.204 1.204 32 H -0.231 1.231 33 H 0.160 0.840 34 H 0.149 0.851 35 H 0.142 0.858 36 H 0.252 0.748 37 H 0.068 0.932 38 H 0.097 0.903 39 H 0.165 0.835 40 H 0.157 0.843 41 H 0.148 0.852 42 H 0.143 0.857 43 H 0.132 0.868 44 H 0.121 0.879 45 H 0.092 0.908 46 H 0.246 0.754 47 H 0.099 0.901 48 H 0.140 0.860 49 H 0.191 0.809 50 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.740 -7.968 -4.634 9.247 hybrid contribution -1.268 -0.302 0.042 1.304 sum -2.008 -8.270 -4.591 9.670 Atomic orbital electron populations 1.86537 1.18159 1.80491 1.51328 1.24652 0.84186 1.10356 0.98335 0.94395 0.91027 0.73994 0.76780 1.19340 1.00890 0.94898 0.96309 1.20900 0.95987 0.99862 0.90919 1.21090 1.09607 0.93075 0.98293 1.96752 1.73230 1.73409 1.52949 1.18807 0.93711 0.90544 0.86866 1.86242 1.73346 1.23271 1.38651 1.22792 1.03602 0.80533 0.97307 1.20436 0.79828 0.82505 0.87473 1.90774 1.42657 1.58330 1.52844 1.45530 1.57399 1.08767 1.23924 1.21128 0.99492 0.91362 0.85420 1.20816 0.91044 0.93068 0.99597 1.19630 0.94472 0.97778 0.95213 1.21352 0.94567 0.97994 0.99843 1.21457 0.95189 0.99780 0.97607 1.21436 1.00733 0.97678 0.95373 1.21347 0.94857 0.98612 1.00078 1.21097 0.95088 1.00335 0.98032 1.23723 0.96396 1.01220 0.97423 1.22731 0.89927 0.90107 0.95333 0.89609 1.86459 1.35832 1.47230 1.68087 1.23311 0.94057 1.01821 0.96838 1.21610 1.02655 1.02378 0.94797 1.21241 0.94187 0.93133 0.96540 0.75226 0.87259 1.20395 1.23114 0.83965 0.85145 0.85794 0.74809 0.93163 0.90266 0.83485 0.84256 0.85158 0.85723 0.86775 0.87911 0.90794 0.75437 0.90090 0.86014 0.80926 0.82278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.05 12.81 -148.98 -1.91 -1.85 16 2 C -0.07 0.15 2.79 71.23 0.20 0.35 16 3 Si 0.73 -0.64 29.85 68.60 2.05 1.41 16 4 C -0.11 -0.14 5.38 -19.86 -0.11 -0.25 16 5 C -0.06 -0.26 8.40 22.27 0.19 -0.07 16 6 C -0.14 -1.10 6.24 22.40 0.14 -0.96 16 7 Br -0.05 -0.53 33.16 -20.37 -0.68 -1.20 16 8 C 0.15 0.78 6.68 22.52 0.15 0.93 16 9 O -0.30 -2.35 9.00 -73.60 -0.66 -3.01 16 10 C 0.04 -0.04 5.22 71.24 0.37 0.33 16 11 C 0.51 2.92 7.91 87.66 0.69 3.61 16 12 O -0.57 -9.87 16.50 16.03 0.26 -9.61 16 13 N -0.70 0.31 5.08 -463.05 -2.35 -2.04 16 14 C 0.15 0.29 4.81 86.38 0.42 0.70 16 15 C -0.04 0.16 0.69 -52.34 -0.04 0.12 16 16 C -0.07 0.16 4.93 -19.87 -0.10 0.07 16 17 C -0.12 0.55 9.14 22.27 0.20 0.75 16 18 C -0.12 0.40 10.05 22.27 0.22 0.62 16 19 C -0.13 0.13 10.05 22.27 0.22 0.36 16 20 C -0.13 -0.09 10.05 22.27 0.22 0.13 16 21 C -0.13 -0.11 9.21 22.27 0.21 0.10 16 22 C -0.15 0.66 7.05 31.18 0.22 0.88 16 23 C 0.08 -0.40 5.27 31.12 0.16 -0.24 16 24 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 25 O -0.57 0.84 11.57 -148.98 -1.72 -0.88 16 26 C -0.12 0.80 6.09 31.13 0.19 0.99 16 27 C -0.20 0.33 9.04 22.36 0.20 0.53 16 28 C -0.03 0.05 9.68 22.26 0.22 0.27 16 29 H 0.40 -3.14 8.74 -74.06 -0.65 -3.79 16 30 H 0.11 -0.86 7.96 -2.39 -0.02 -0.88 16 31 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 32 H -0.30 -2.34 7.04 99.48 0.70 -1.64 16 33 H 0.14 0.44 4.86 -2.91 -0.01 0.42 16 34 H 0.13 -1.08 7.66 -2.39 -0.02 -1.10 16 35 H 0.12 -0.89 7.66 -2.39 -0.02 -0.91 16 36 H 0.41 -2.85 7.96 -92.71 -0.74 -3.59 16 37 H 0.05 0.28 7.12 -2.39 -0.02 0.26 16 38 H 0.08 0.48 6.04 -2.39 -0.01 0.47 16 39 H 0.15 -1.40 5.97 -2.91 -0.02 -1.42 16 40 H 0.14 -0.99 8.06 -2.91 -0.02 -1.01 16 41 H 0.13 -0.47 8.06 -2.91 -0.02 -0.50 16 42 H 0.12 -0.13 8.06 -2.91 -0.02 -0.15 16 43 H 0.11 0.13 7.46 -2.91 -0.02 0.11 16 44 H 0.10 -0.56 8.10 -2.39 -0.02 -0.58 16 45 H 0.07 -0.22 8.10 -2.39 -0.02 -0.24 16 46 H 0.40 -3.20 9.12 -74.06 -0.68 -3.87 16 47 H 0.08 -0.46 7.44 -2.39 -0.02 -0.48 16 48 H 0.12 -1.24 6.26 -2.39 -0.01 -1.26 16 49 H 0.17 -1.61 6.30 -2.91 -0.02 -1.63 16 50 H 0.16 -1.03 8.06 -2.91 -0.02 -1.05 16 Total: 0.00 -29.40 427.90 -2.02 -31.43 By element: Atomic # 1 Polarization: -22.47 SS G_CDS: -1.00 Total: -23.46 kcal Atomic # 6 Polarization: 5.25 SS G_CDS: 3.99 Total: 9.23 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -2.35 Total: -2.04 kcal Atomic # 8 Polarization: -11.32 SS G_CDS: -4.03 Total: -15.35 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: 2.05 Total: 1.41 kcal Atomic # 35 Polarization: -0.53 SS G_CDS: -0.68 Total: -1.20 kcal Total: -29.40 -2.02 -31.43 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.408 kcal (2) G-P(sol) polarization free energy of solvation -29.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds