Wall clock time and date at job start Sat Mar 6 2021 23:26:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35962 * 117.00033 * 2 1 4 4 C 1.39456 * 120.12318 * 179.97438 * 3 2 1 5 5 O 1.34773 * 133.23935 * 0.33738 * 4 3 2 6 6 C 1.34934 * 110.83971 * 180.12610 * 5 4 3 7 7 C 1.46985 * 125.13838 * 179.81401 * 6 5 4 8 8 O 1.21656 * 120.00187 * 179.69778 * 7 6 5 9 9 N 1.34784 * 120.00238 * 359.69532 * 7 6 5 10 10 C 1.46499 * 120.00178 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.46947 * 184.85636 * 10 9 7 12 12 C 1.50701 * 112.85154 * 65.13212 * 11 10 9 13 13 C 1.38238 * 120.00033 * 246.30941 * 12 11 10 14 14 C 1.38233 * 119.99983 * 180.25004 * 13 12 11 15 15 C 1.38230 * 120.00357 * 359.51268 * 14 13 12 16 16 C 1.38240 * 119.99798 * 0.27757 * 15 14 13 17 17 C 1.38235 * 119.99863 * 359.95539 * 16 15 14 18 18 C 1.53779 * 113.61824 * 293.93258 * 11 10 9 19 19 C 1.53784 * 87.08004 * 270.80193 * 18 11 10 20 20 H 1.08997 * 113.61343 * 220.01465 * 19 18 11 21 21 O 1.42905 * 113.61517 * 89.19876 * 19 18 11 22 22 C 1.53777 * 113.61230 * 196.32468 * 11 10 9 23 23 C 1.35807 * 109.71906 * 359.54753 * 6 5 4 24 24 C 1.40611 * 119.13930 * 179.97438 * 4 3 2 25 25 C 1.39779 * 120.11698 * 359.97438 * 24 4 3 26 26 C 1.50697 * 120.09431 * 179.97438 * 25 24 4 27 27 O 1.42900 * 109.47283 * 75.00228 * 26 25 24 28 28 Si 1.86302 * 109.47433 * 195.00010 * 26 25 24 29 29 C 1.36629 * 119.81439 * 359.97438 * 25 24 4 30 30 C 1.38264 * 120.12245 * 359.97438 * 3 2 1 31 31 H 1.08996 * 109.47680 * 300.00325 * 1 2 3 32 32 H 1.09006 * 109.46784 * 60.00689 * 1 2 3 33 33 H 1.09000 * 109.47116 * 179.97438 * 1 2 3 34 34 H 0.97001 * 119.99263 * 0.02562 * 9 7 6 35 35 H 1.08996 * 109.46833 * 64.85444 * 10 9 7 36 36 H 1.09005 * 109.46878 * 304.85695 * 10 9 7 37 37 H 1.08003 * 120.00011 * 0.04347 * 13 12 11 38 38 H 1.08005 * 119.99918 * 179.78925 * 14 13 12 39 39 H 1.07998 * 120.00725 * 180.25172 * 15 14 13 40 40 H 1.08000 * 120.00365 * 179.97438 * 16 15 14 41 41 H 1.07997 * 120.00223 * 180.02562 * 17 16 15 42 42 H 1.09006 * 113.61321 * 25.34722 * 18 11 10 43 43 H 1.09001 * 113.61855 * 156.16933 * 18 11 10 44 44 H 0.96693 * 113.99996 * 180.02562 * 21 19 18 45 45 H 1.09001 * 113.61740 * 203.75079 * 22 11 10 46 46 H 1.08996 * 113.61928 * 334.65073 * 22 11 10 47 47 H 1.08001 * 126.95506 * 180.26211 * 23 6 5 48 48 H 1.09000 * 109.47260 * 314.99635 * 26 25 24 49 49 H 0.96698 * 114.00525 * 180.02562 * 27 26 25 50 50 H 1.48498 * 109.99923 * 300.00371 * 28 26 25 51 51 H 1.48501 * 109.99755 * 61.31709 * 28 26 25 52 52 H 1.08002 * 119.75659 * 180.02562 * 29 25 24 53 53 H 1.08002 * 119.65831 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4141 0.3574 -0.0047 6 6 5.6318 0.9387 0.0015 7 6 6.9131 0.2185 0.0022 8 8 7.9596 0.8388 0.0025 9 7 6.9287 -1.1292 0.0026 10 6 8.2057 -1.8471 0.0039 11 6 7.9461 -3.3499 -0.1180 12 6 7.3251 -3.7314 -1.4370 13 6 6.0365 -4.2302 -1.4758 14 6 5.4687 -4.5850 -2.6852 15 6 6.1859 -4.4317 -3.8569 16 6 7.4730 -3.9288 -3.8187 17 6 8.0425 -3.5785 -2.6088 18 6 7.2243 -3.9512 1.0995 19 6 8.6163 -4.1890 1.7083 20 1 8.7082 -5.1423 2.2287 21 8 9.0999 -3.0872 2.4792 22 6 9.1562 -4.2172 0.2669 23 6 5.4945 2.2898 0.0010 24 6 4.0555 2.5510 0.0000 25 6 3.2765 3.7117 -0.0016 26 6 3.9381 5.0657 -0.0017 27 8 4.4620 5.3399 -1.3026 28 14 2.6858 6.3688 0.4507 29 6 1.9137 3.6151 -0.0032 30 6 1.2957 2.3726 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 -0.3633 -1.0277 -0.0005 34 1 6.0942 -1.6238 0.0021 35 1 8.7356 -1.6441 0.9345 36 1 8.8110 -1.5133 -0.8390 37 1 5.4744 -4.3458 -0.5608 38 1 4.4631 -4.9779 -2.7150 39 1 5.7409 -4.7051 -4.8022 40 1 8.0335 -3.8094 -4.7340 41 1 9.0479 -3.1853 -2.5789 42 1 6.6238 -3.2284 1.6519 43 1 6.6815 -4.8695 0.8757 44 1 9.9751 -3.2307 2.8644 45 1 9.1438 -5.2092 -0.1847 46 1 10.1132 -3.7091 0.1481 47 1 6.2874 3.0230 0.0011 48 1 4.7496 5.0736 0.7260 49 1 4.9034 6.1971 -1.3763 50 1 1.5741 6.3682 -0.5338 51 1 2.1567 6.1130 1.8144 52 1 1.3127 4.5125 -0.0049 53 1 0.2174 2.3120 -0.0014 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13154426_6672420.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:26:54 Heat of formation + Delta-G solvation = -51.073528 kcal Electronic energy + Delta-G solvation = -39662.345367 eV Core-core repulsion = 34626.997184 eV Total energy + Delta-G solvation = -5035.348183 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.165 amu Computer time = 2.03 seconds Orbital eigenvalues (eV) -43.88875 -41.95160 -40.93365 -40.32400 -39.31100 -39.06132 -37.13202 -36.52809 -35.21385 -33.78827 -32.19306 -31.95852 -31.75891 -31.29185 -29.18670 -28.33241 -26.99912 -26.31775 -25.31922 -24.23527 -24.17227 -23.24970 -22.36999 -21.98407 -21.79142 -20.34158 -19.59573 -18.99166 -18.69254 -18.54009 -18.44613 -17.85012 -17.71951 -17.25126 -17.16813 -16.77398 -16.47632 -16.39718 -16.11811 -15.96556 -15.83539 -15.47040 -15.31729 -15.26021 -14.79264 -14.62274 -14.46344 -14.34114 -14.23126 -14.17905 -14.10445 -14.01790 -13.72842 -13.47110 -13.23255 -13.19552 -13.09887 -12.76850 -12.61022 -12.45496 -12.26514 -12.15135 -11.96198 -11.93293 -11.73370 -11.64059 -11.24707 -11.14749 -10.77501 -10.32473 -10.30413 -9.97465 -9.86843 -9.65740 -9.15873 -4.92750 -0.80005 -0.09711 0.38078 0.44827 0.49276 1.05806 1.28137 1.66988 1.79851 1.81345 1.94387 1.99353 2.20690 2.78805 3.03324 3.13571 3.28585 3.32967 3.40431 3.47811 3.61253 3.66665 3.68641 3.71726 3.81038 3.94543 3.96146 4.02061 4.08468 4.10647 4.17312 4.23294 4.29452 4.30496 4.32426 4.40414 4.46685 4.57773 4.63873 4.64989 4.69074 4.69634 4.71816 4.80077 4.81050 4.87535 4.94877 5.01632 5.04763 5.05748 5.10931 5.14783 5.17088 5.20250 5.44257 5.54495 5.59356 5.62216 6.04837 6.06815 6.16944 6.72389 6.88180 6.89288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.328 6.328 3 C 0.140 3.860 4 C 0.023 3.977 5 O -0.179 6.179 6 C -0.033 4.033 7 C 0.601 3.399 8 O -0.542 6.542 9 N -0.697 5.697 10 C 0.145 3.855 11 C -0.048 4.048 12 C -0.074 4.074 13 C -0.125 4.125 14 C -0.126 4.126 15 C -0.134 4.134 16 C -0.129 4.129 17 C -0.124 4.124 18 C -0.129 4.129 19 C 0.082 3.918 20 H 0.089 0.911 21 O -0.567 6.567 22 C -0.142 4.142 23 C -0.106 4.106 24 C -0.097 4.097 25 C -0.069 4.069 26 C -0.088 4.088 27 O -0.563 6.563 28 Si 0.785 3.215 29 C -0.106 4.106 30 C -0.170 4.170 31 H 0.074 0.926 32 H 0.072 0.928 33 H 0.122 0.878 34 H 0.411 0.589 35 H 0.092 0.908 36 H 0.065 0.935 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.133 0.867 40 H 0.132 0.868 41 H 0.125 0.875 42 H 0.069 0.931 43 H 0.116 0.884 44 H 0.398 0.602 45 H 0.104 0.896 46 H 0.083 0.917 47 H 0.182 0.818 48 H 0.085 0.915 49 H 0.403 0.597 50 H -0.280 1.280 51 H -0.285 1.285 52 H 0.146 0.854 53 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.581 -0.856 1.459 3.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.242 6.242 3 C 0.094 3.906 4 C -0.025 4.025 5 O -0.081 6.081 6 C -0.083 4.083 7 C 0.386 3.614 8 O -0.422 6.422 9 N -0.346 5.346 10 C 0.022 3.978 11 C -0.049 4.049 12 C -0.074 4.074 13 C -0.143 4.143 14 C -0.144 4.144 15 C -0.152 4.152 16 C -0.147 4.147 17 C -0.142 4.142 18 C -0.166 4.166 19 C 0.023 3.977 20 H 0.107 0.893 21 O -0.376 6.376 22 C -0.180 4.180 23 C -0.127 4.127 24 C -0.098 4.098 25 C -0.069 4.069 26 C -0.196 4.196 27 O -0.373 6.373 28 Si 0.689 3.311 29 C -0.123 4.123 30 C -0.188 4.188 31 H 0.092 0.908 32 H 0.090 0.910 33 H 0.140 0.860 34 H 0.247 0.753 35 H 0.110 0.890 36 H 0.084 0.916 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.150 0.850 40 H 0.150 0.850 41 H 0.143 0.857 42 H 0.088 0.912 43 H 0.134 0.866 44 H 0.249 0.751 45 H 0.123 0.877 46 H 0.101 0.899 47 H 0.199 0.801 48 H 0.103 0.897 49 H 0.254 0.746 50 H -0.207 1.207 51 H -0.212 1.212 52 H 0.163 0.837 53 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges -3.399 -1.131 1.387 3.841 hybrid contribution 0.172 -0.933 -0.145 0.959 sum -3.226 -2.063 1.243 4.026 Atomic orbital electron populations 1.23510 0.75271 1.06287 1.02986 1.86149 1.24347 1.25351 1.88365 1.17869 0.86175 0.86691 0.99836 1.19191 0.88250 0.87216 1.07875 1.84021 1.12761 1.34936 1.76412 1.22029 0.83938 0.92871 1.09426 1.16603 0.85010 0.82608 0.77138 1.90879 1.31126 1.68126 1.52023 1.45747 1.11370 1.04923 1.72550 1.21365 0.84195 0.88986 1.03238 1.20841 0.99014 0.93121 0.91884 1.19675 0.94462 0.99196 0.94026 1.21283 0.94784 0.99535 0.98721 1.21424 1.00630 0.99730 0.92616 1.21443 0.94977 0.99668 0.99141 1.21400 0.95935 0.98968 0.98378 1.21140 1.00432 1.00271 0.92314 1.23306 0.96395 1.02375 0.94546 1.22713 0.94627 0.89947 0.90416 0.89322 1.86442 1.40205 1.41286 1.69689 1.23676 0.96920 1.00381 0.97004 1.22864 0.94931 0.94429 1.00432 1.19602 0.92866 0.92486 1.04813 1.18888 0.92828 0.93315 1.01887 1.25004 1.06465 0.98822 0.89321 1.86469 1.78287 1.43871 1.28659 0.94014 0.76461 0.84457 0.76184 1.20691 0.93448 0.98298 0.99886 1.21280 1.01776 0.89569 1.06192 0.90771 0.90958 0.86021 0.75277 0.89019 0.91649 0.84636 0.84698 0.84952 0.85040 0.85736 0.91177 0.86572 0.75143 0.87739 0.89858 0.80056 0.89703 0.74553 1.20681 1.21169 0.83725 0.80459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.33 -2.03 10.50 -93.12 -0.98 -3.01 16 3 C 0.14 1.15 6.70 22.57 0.15 1.30 16 4 C 0.02 0.28 7.35 23.14 0.17 0.45 16 5 O -0.18 -2.25 10.28 -13.44 -0.14 -2.39 16 6 C -0.03 -0.39 7.07 24.00 0.17 -0.22 16 7 C 0.60 7.30 7.80 86.53 0.67 7.98 16 8 O -0.54 -9.30 16.82 -4.21 -0.07 -9.37 16 9 N -0.70 -4.87 5.18 -466.79 -2.42 -7.29 16 10 C 0.14 0.68 4.82 86.38 0.42 1.09 16 11 C -0.05 0.01 0.62 -52.40 -0.03 -0.03 16 12 C -0.07 -0.13 4.63 -19.86 -0.09 -0.23 16 13 C -0.13 -0.17 9.05 22.27 0.20 0.03 16 14 C -0.13 -0.25 10.05 22.27 0.22 -0.02 16 15 C -0.13 -0.35 10.05 22.27 0.22 -0.13 16 16 C -0.13 -0.39 10.05 22.27 0.22 -0.17 16 17 C -0.12 -0.38 9.34 22.27 0.21 -0.17 16 18 C -0.13 0.23 5.94 31.12 0.18 0.41 16 19 C 0.08 -0.26 5.28 31.18 0.16 -0.09 16 20 H 0.09 -0.55 8.14 -2.39 -0.02 -0.56 16 21 O -0.57 0.33 11.52 -148.98 -1.72 -1.39 16 22 C -0.14 0.46 6.96 31.18 0.22 0.68 16 23 C -0.11 -1.17 10.68 23.79 0.25 -0.92 16 24 C -0.10 -1.08 6.16 -20.24 -0.12 -1.20 16 25 C -0.07 -0.54 5.30 -19.87 -0.11 -0.64 16 26 C -0.09 -0.16 2.70 71.24 0.19 0.03 16 27 O -0.56 -1.26 12.86 -148.98 -1.92 -3.18 16 28 Si 0.79 -1.99 30.20 68.60 2.07 0.08 16 29 C -0.11 -0.57 8.62 22.02 0.19 -0.38 16 30 C -0.17 -0.63 9.03 22.40 0.20 -0.43 16 31 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 32 H 0.07 -0.43 7.66 -2.38 -0.02 -0.45 16 33 H 0.12 -0.85 8.14 -2.39 -0.02 -0.87 16 34 H 0.41 2.06 7.84 -92.71 -0.73 1.34 16 35 H 0.09 0.61 5.95 -2.39 -0.01 0.59 16 36 H 0.07 0.43 7.97 -2.38 -0.02 0.41 16 37 H 0.14 -0.26 6.43 -2.91 -0.02 -0.28 16 38 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 39 H 0.13 -0.07 8.06 -2.91 -0.02 -0.10 16 40 H 0.13 0.02 8.06 -2.91 -0.02 0.00 16 41 H 0.12 0.17 8.06 -2.91 -0.02 0.15 16 42 H 0.07 0.07 7.83 -2.38 -0.02 0.05 16 43 H 0.12 -0.53 6.81 -2.39 -0.02 -0.55 16 44 H 0.40 -3.28 9.12 -74.06 -0.68 -3.96 16 45 H 0.10 -0.46 8.09 -2.39 -0.02 -0.47 16 46 H 0.08 -0.28 8.10 -2.39 -0.02 -0.30 16 47 H 0.18 1.50 8.06 -2.91 -0.02 1.48 16 48 H 0.09 -0.07 7.96 -2.39 -0.02 -0.09 16 49 H 0.40 -3.49 8.74 -74.06 -0.65 -4.13 16 50 H -0.28 -0.69 6.75 99.48 0.67 -0.01 16 51 H -0.28 -0.75 7.11 99.48 0.71 -0.05 16 52 H 0.15 0.33 4.85 -2.91 -0.01 0.31 16 53 H 0.18 -0.63 6.26 -2.91 -0.02 -0.65 16 Total: 0.00 -25.60 437.06 -1.38 -26.98 By element: Atomic # 1 Polarization: -7.81 SS G_CDS: -1.04 Total: -8.85 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 4.82 Total: 8.40 kcal Atomic # 7 Polarization: -4.87 SS G_CDS: -2.42 Total: -7.29 kcal Atomic # 8 Polarization: -14.51 SS G_CDS: -4.82 Total: -19.33 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: 2.07 Total: 0.08 kcal Total: -25.60 -1.38 -26.98 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13154426_6672420.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.090 kcal (2) G-P(sol) polarization free energy of solvation -25.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.074 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.03 seconds